KEGG   Lates calcarifer (barramundi perch): 108893377
Entry
108893377         CDS       T04895                                 
Name
(RefSeq) la-related protein 1 isoform X1
  KO
K18757  la-related protein 1
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcf03019]
    108893377
Messenger RNA biogenesis [BR:lcf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     108893377
SSDB
Motif
Pfam: LARP1_HEAT La MRJP SGP
Other DBs
NCBI-GeneID: 108893377
NCBI-ProteinID: XP_018546871
UniProt: A0A4W6DNN1
LinkDB
Position
LG20:15727956..15777601
AA seq 1112 aa
MATQVEALLPGNPLAKAEEHGKVIRGEPEEEEGGRGDGAKRQTGVADQGSSGGSSPGQGG
TPGAEEQTSKQATEESKGGCDSEDKQNEEGVKDGSRKEFTEAPPPKVNPWTRKMNAVTVV
SVNGQAHHESTGPAKVVRAGNPPKARRGGKVGDFGDTNSWPTPGEIATKDMQIEAVTRTV
SCPPTVRQVRDSWRSTAPKRTTAKKESKEKRESNEESKENLKAKSDDSGEEKNGDDDSQK
NGPKKKGNKQKWVPLMIEVKSEGPRERSASRNNSRQNENPRLPPNARNDLRDWHSQKYER
EWRDDHDEVSSVKSEGAPFRGGFRGRGRGRGRGRGRGRGGSRGHYDYHYGYKSYDMKDGT
YGQKFSNSVTYYYDNMSSNDLYSVDQDLLKDYIKRQIEYYFSLDNLERDFFLRRKMDQEG
FLPIGLIASFHRVQALTTDINLILEALKDSKDVEVIDMKIRRKVDPEKWPLPGLNMPNHT
HTDFSQLINCPEFVPRQMIEEPRGSPRASTPVQQQTKTEPDTSNLKTMPKGLSASLPDLD
SESWIEVKKRPRPSPARPKVSAEKAPSLQQQQLQQQQKEKDDSIRSPVPQLGSSPCPATS
GNKDGAEQDEPEELDFMFDEEMEQMDGRRNTFTDWSDEETDGEIDDHDVNKILIVTQTPP
YLRKHPGGDRTGHHTSRAKLTSELAKVINDGLFYYEQDLWDDTYEPEYATIKQEVENFKK
VHLISREQFDCLTPEPPVDPNQEVPPGPPRPQQIPTDALANKLFGAPEPTSIARSLPTTV
PDSPNYRSARTPRTPRTPHRKDPTMTPRFYPVVKESRPVDAKTPRKRKTRHSSNPPMECH
VGWVMDSREHRSRTASVSSNASPSEGTPALGNIGCTPQSLPKFQHPSHELLKENGFTQHV
YHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNRKMYEEFRQLVVEDGKEGYRY
GLECLFRYYSYGLEKKFRPEIFKDFQEETMKDYEAGQLYGLEKFWAFLKYSKAKTLDIDP
KLQEYLSKFKRLEDFRIDPPMEEGGRRRHSSSGDGRRRHPSQPSSRPQSQASSGPGPALT
AQGPAAKDDAKPTSQKAPAPTADPAPDAKTLK
NT seq 3339 nt   +upstreamnt  +downstreamnt
atggccactcaggtggaggctctcctgcccggcaacccgcttgccaaagcggaggagcac
ggcaaagtgatccgaggtgagccggaggaagaggagggcggccggggcgacggggccaag
cggcagacgggtgtcgccgaccaggggagcagcggcggcagcagccccgggcagggaggg
acccccggtgcggaggagcagacctccaaacaagcgacggaggagagcaaaggaggctgt
gacagcgaagacaagcaaaacgaggagggtgttaaagacggcagcagaaaggagtttact
gaagctcccccgcccaaggtgaacccgtggactaggaaaatgaacgcggtgaccgtggtc
agcgtgaatggacaagcacaccacgagtcgaccggcccggccaaggtggtgagagcaggg
aacccacccaaagccagacgtggaggaaaggttggagatttcggtgacacaaacagctgg
ccaactcctggggagatcgcaactaaagacatgcagatcgaggcagtgacacggaccgtg
tcctgcccgccgactgtcaggcaggtcagagactcatggagatccactgcccccaagagg
acgacagccaagaaggagtcaaaggagaagagggagagcaacgaggagagcaaggagaac
ctgaaggccaagtcagacgactctggagaggaaaagaacggcgacgacgactcccagaag
aacgggcccaagaaaaaaggaaacaagcagaagtgggttcccctgatgatcgaggtgaag
tcggagggtcccagagagcgctcggcctccaggaacaacagcagacagaacgaaaacccc
cgcctccctcccaacgccaggaacgacctcagagactggcacagtcaaaagtacgagcgc
gagtggcgtgacgaccacgacgaggtgtccagcgtgaaaagcgagggggcgccgttccgt
ggagggttcagaggtcgcgggcgcgggagaggaagaggccggggacgaggcagaggtggc
agcagaggccactatgactatcactatggctacaagtcctatgatatgaaagacggaacc
tacggccagaagttcagcaactcagtgacctactactacgacaacatgagcagcaacgac
ctttactctgtcgatcaggacctgctgaaggactacatcaagaggcagatcgagtattac
ttcagcctggacaacctggagcgcgacttcttcctgcggaggaagatggatcaggagggc
ttcctgcccatcggactcatcgccagtttccacagggtgcaggccctcaccactgacatc
aacctcatcctggaagcattgaaggacagcaaggacgtggaggtgatcgacatgaagatc
cgtcggaaggtggaccccgagaagtggcctctcccgggcctgaacatgcctaaccacacc
cacactgacttctcccagctcatcaactgccccgagtttgtcccgagacaaatgattgag
gagcccagagggtctcccagggcctccacaccagtgcagcaacagaccaagactgaacca
gacacttccaacctcaagacgatgcccaagggcctctccgccagcctccccgacctggac
tcggagtcctggatcgaggtcaagaagaggccaagaccctccccagccagacccaaggtc
agcgcagagaaggccccctcgttgcagcagcagcagctgcagcagcagcagaaggaaaag
gacgactcgattcgctccccggtaccccagcttggctcatcgccctgccccgctacctca
ggaaataaggacggagcagagcaggacgaaccagaggagctggacttcatgttcgatgag
gagatggagcagatggacggacggcgcaacaccttcaccgactggtcggacgaggaaacg
gacggcgagatcgacgaccacgacgtcaacaaaatcctcatcgtgacgcagacaccgccc
tacctgaggaagcacccggggggcgaccgcacggggcaccacacgtcgcgcgccaagctg
accagcgagctggccaaggtcatcaacgacgggctcttctactacgagcaggacctgtgg
gacgacacgtacgagcctgagtacgccaccatcaagcaagaggtggagaacttcaagaag
gtccacctgatcagccgcgaacagtttgactgcctgactcccgaacctcctgtcgacccc
aaccaggaagtcccaccaggccccccgcgaccccagcagatccccacagacgctttggca
aacaaactcttcggtgcccctgagcccacttcaatagctcgctcgctcccaactaccgtg
cctgactcgcccaactaccgcagtgcccggacgccccgcacgcctcgtacccctcaccgg
aaggacccgaccatgacaccgcgcttctaccctgtggtgaaggaaagtcggcctgtcgat
gccaagacacccaggaaaaggaagacccgacacagctccaacccacccatggagtgccac
gttggctgggtgatggactccagagagcatcgctcacgcaccgcctccgtcagctctaac
gccagcccatcagaaggcacccccgccctgggtaacattggctgcacgcctcagtccctc
cccaagttccagcacccatcacacgagctgctcaaggagaacggcttcacgcaacacgtt
taccacaagtaccgccggcgctgcctaaacgagcgaaagcgactcggaatcggccagtcg
caggagatgaacacgctcttccgcttctggtcatttttcctgcgggatcacttcaatcgg
aagatgtacgaggagttcagacagctggtggtcgaggacgggaaagaaggatacaggtac
ggtttggagtgcctcttcaggtactacagctatggtctagagaagaagttcaggccagaa
atctttaaggacttccaggaggagaccatgaaagactacgaggctggccagctttatgga
ctggagaagttctgggccttccttaaatactccaaagccaagaccttggacattgatccg
aagctgcaggagtatctgagcaagtttaaacgtctggaagatttcaggattgatccgcct
atggaggaaggaggccgcagaagacactcgtccagcggggacggtcgccgtcggcacccc
tctcagccctccagccggccccagagccaggccagctcaggccccggccccgccctcacc
gcccagggccctgcagccaaggatgatgccaaacccaccagccagaaagcccctgccccg
accgctgaccccgcaccagatgccaagacactgaagtaa

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