Lates calcarifer (barramundi perch): 108893385
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Entry
108893385 CDS
T04895
Name
(RefSeq) HEAT repeat-containing protein 6
KO
K24815
HEAT repeat-containing protein 6
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108893385
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Other domain-containing proteins
HEAT repeat domain-containing proteins
108893385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4042
HEAT_EZ
HEAT_2
HEAT
IFRD
Cnd1
UTP20_C
Motif
Other DBs
NCBI-GeneID:
108893385
NCBI-ProteinID:
XP_018546889
UniProt:
A0A4W6D9K1
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All DBs
Position
LG20:complement(14401381..14410517)
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AA seq
1219 aa
AA seq
DB search
MAAQTGLSAPVLGRSCGPAFDPEAPSFTPMGTDGWQLGPPSDAEKQFSRCAAKLRALRAD
SGQLREELNLLFDHLLSENYNKTFYPSINIRPEDVCTLLKHASFLVPLSQEHLVIKFCQL
MHHLLNQLKVIMDEQTLDVLLNYTASALKMCSTWTHSDVLLALSTVVYGNGPQCHQHLSD
LLGEDGVLLLYSAPSQPNMELRRVALNCMANICLRIPGQPPLDDQYRGVCFRVFLTTLQS
PKPPNTDELFYCMVIQAALKGLQCCLSGGKWKFNGGEELGSVLAILKRLMFQGAPGVSVE
WPAVLYPAPLPQYEGLSAPKSAEPQKPSEPPKDAAAPGKASGNKKRKSRGKGKKTSTEGS
RGDDGEEDDREAVSALQKGGGREGGRGEGESLSKPSAPSLYPSWKLNSSDSEFSDMEGNA
QSKLRLNHGHVRQGALHCLLAVVKSVEKRTLYGYWSSFIPDSPTGGQPPLTLLTIILKDP
SPKVRACALQVLSAMLDGSRQFLAVAEDTASPRTSYTPFSFSLATAIRELHRALSLALLA
ETAPQTLTQVIKCLAYLVANAPYHRLRPGLLSPLWKQMRPYVRHRDVNVRVSVLTLYGAL
VTTQAPFPEVQLLLRQPDSGSSSAGSFTPQDSALSWRQRDGTSSPSRTPVTPSQRSSHTH
SPHILRTPGEEESSPPWLLQLCVSLVTQPREDQSDSEGAGTGGGAALEPSPIRLEALQVL
SHLVRGYFSLAQACLCDIGQVSARCLGETDPSIQLHGAKLLEELGTGIIQQYRAENNVPE
SLRVPISQVVQFWSEVLSGPLNGVLQSEQHPMLQSSACDTLSSILPQAFAQLPDKTQLMC
ITVLLGLTYSENYLVKTAAVRALGVYILFPCLREDVMFVADTANTILATLEDRSTNVRAK
AAWSLGNLTDTLIVNMESVGVDFQEELSDMLLLKMLQAATRASADKDRVKSNAVRALGNL
LYFLRRSQLTRSAFQRPLEEAVRALVKTVQSEATMKVRWNACYALGKAFRNPALPLDSAL
WSCDAFSALCHVVTSCKNFKVRIKSAAALAVPARRSCYGDTKRFSCVWRSLATALENSED
TNDFLEYRYSASLRHTLSQALLHLLSLSQSQDMPALGQSLAGEEGKGIKEHLIRYLRAEE
GGGEGAEGEKDAGGDGFNPQQRIGCLQQTLIRLKGLEAEGEGGGKEERGKEVVVSFLEDL
TKTCEELSSCSAGFQKTET
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcaaacagggttgtcagcaccggttcttggccgtagctgtggccctgctttc
gatccggaggctccatccttcactcccatgggtacggacggttggcagctcggtccgccg
tcggacgccgagaaacagttttcccgctgcgccgcaaagctcagagctctgcgggcagac
tcaggccaactcagagaggagctcaacctgctgtttgaccacctgctgtccgaaaactac
aacaaaaccttctaccccagcattaacatccgaccagaggatgtgtgtactctgctgaaa
catgccagctttcttgtgccactgagtcaagaacatttagtcatcaaattctgccagcta
atgcatcatctactaaatcaactaaaggtaataatggatgagcagacattggacgtgttg
ttgaactataccgccagtgcactgaagatgtgcagtacatggacacactcagatgtcctc
ctggcactctccacagtagtgtatgggaatggacctcagtgccatcagcacctcagtgac
ttactgggtgaagatggagtgcttctgctgtacagtgctccatctcagccaaatatggaa
ttacgccgcgttgctcttaactgtatggccaacatctgtctcagaatcccgggtcagccg
cctttggatgatcaatacagaggtgtctgtttcagagtctttctgacaacactgcagtcg
cccaaaccccccaacactgatgagctcttctactgcatggtgatccaggctgcactgaaa
ggacttcagtgttgtctctccggtggaaagtggaagtttaatggaggggaggagcttgga
tctgtactggccatacttaagaggctcatgttccagggagctccgggagtgagtgtcgag
tggccggcggtgctttacccagcacctcttcctcagtatgagggtctctctgcgccaaaa
tctgctgaaccacaaaaaccctctgaaccaccaaaggatgccgctgcgccagggaaagcc
tcagggaataaaaagaggaaatctagaggaaaggggaagaagacgagcacagaggggagc
agaggggatgatggagaggaagatgatagagaggcagtgtctgcactacaaaaaggaggg
ggaagagagggaggcagaggtgaaggagagtccttgtctaaaccctctgccccatctctc
tacccgtcctggaaactaaacagttctgactcagagttttccgacatggagggcaacgca
cagagcaaattaagacttaaccacggccatgtgcgtcagggagctttgcactgtttgcta
gcagtggtgaaaagtgtggaaaagcggactctgtacgggtactggtcctccttcatccct
gactctcctactgggggacaaccgcctctcactctgctcacaattatactgaaggaccca
tcgccaaaggtgcgtgcatgtgcgcttcaggtattgtcggccatgctggatggctcccgt
cagttcctggctgtggctgaagatacagcgtctcctcgtacatcttacacccctttctcc
ttctcactggccactgccatcagagagctgcaccgtgctctcagtctggctctgctggct
gagaccgcccctcagacactcacacaggtcataaagtgcctggcctatctggtggccaac
gctccctaccaccgtctcagacctggtctgctcagcccgctctggaagcagatgcgtcct
tatgtgcgccacagagacgtgaacgtgcgcgtgtcggtcctgacactctacggcgctctg
gtgacgactcaggctcctttccccgaggtgcagctcctcctccgacagccggacagtggc
agcagcagcgccggctccttcacgccgcaggactcggctctcagctggagacaacgagac
gggacatcctcaccctctcgcacaccggtcacaccctcccagcgcagctcgcacacgcac
tccccccacattcttcgcacgccgggggaggaggagagctcgccgccgtggctgctgcag
ctgtgcgtgtcgctggtgactcagcccagagaggaccagtcagacagcgagggagcggga
acaggaggtggtgctgctttggagccctcacctatccgattagaagctctacaggtcctg
tcccacctggtacgtggctatttctctctagcccaggcatgtctgtgtgatattgggcag
gtgagcgcacgctgccttggggagaccgatccctccatacaactgcatggagcaaagtta
ctggaggagttggggacaggaataatccagcagtacagagcagagaacaacgtgcctgag
agcttgagagtccccataagccaagtggtgcagttttggtcagaagtcttgagcggtccg
ctgaacggagtgctgcagagtgaacagcatcccatgctgcagtcgagcgcctgcgacacg
ctctcctccatcctgccccaggccttcgcacagctgcctgacaagacccagctgatgtgc
atcactgtgctgctggggctgacctacagtgaaaattacctggtgaagacggcagctgtc
agggctttgggagtctacatactgttcccttgtctgagagaggatgtgatgtttgtcgca
gatacagcaaacactatcctcgccaccctggaggatcgatctacaaacgtccgtgctaag
gctgcctggtctctaggcaatctcacagacacacttattgtcaatatggagagtgtgggt
gtggacttccaagaagagttgtcagacatgctgctgctcaagatgttgcaggcagctact
cgagcatcagccgacaaagacagggtgaagtccaacgcagtgcgagcactcggcaatctg
ctttatttcctgcgccggagtcagctgacccggtctgctttccagcgcccactggaagaa
gcagtacgagctctcgtaaaaactgtccagtcagaggccacgatgaaggtcagatggaac
gcctgttacgccttgggaaaagctttcagaaacccagccctgccactcgactcagccctg
tggtcttgtgacgcgttctccgccctctgtcatgtcgttacctcctgcaagaacttcaag
gtacggatcaaatcggccgccgccctggccgtccccgcccgccgcagctgctacggcgac
acgaagcggttcagctgcgtgtggcgctcgctggccacggcgctcgagaacagtgaagac
acaaacgacttcttagagtaccgctacagcgccagcctgcgacacacgctctcacaggct
ctcctgcacctgctcagcctcagtcagtctcaggacatgcccgccctcgggcagtcgctg
gcgggcgaggaggggaagggcatcaaagagcatttgatcagatatctcagagcagaggag
ggaggaggggagggggcggagggagagaaagatgcaggcggggacggtttcaatcctcag
cagagaatcggatgtctgcagcagactctgatcagactgaaggggttggaggctgaaggg
gagggagggggaaaggaggagagagggaaggaggtagtggtcagttttctggaggatttg
acgaagacctgtgaagaactgtccagctgcagcgctgggtttcagaaaactgagacctga
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