Lates calcarifer (barramundi perch): 108893394
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Entry
108893394 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: finTRIM family, member 83
Organism
lcf
Lates calcarifer (barramundi perch)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
Prok-RING_4
zf-RING_5
PMEI
zf-RING_6
DUF5344
PI3K_P85_iSH2
GIT1_C
Motif
Other DBs
NCBI-GeneID:
108893394
NCBI-ProteinID:
XP_018546900
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Position
LG20:7870433..7874828
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AA seq
577 aa
AA seq
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MSFDQDNCYLCKEYLRDPVSIPCGHVFCSVCLKTYWDHADHTGSYLCPQCKVTYNKRPTP
RRIGGSRHSTIQRNSESFPPPPPSPDYNYAGPQDVGCDICIGKKHKAVKTCLMCLASYCE
KHLKPHFESATFKRHKLVDEIGHLDRQICPQHQKGLELFCRTDQMCICVLCTVKEHKGHD
MVSAEQERAEEQQRLGATQAEIQEKIHDRLKQMEELKQAVDSLKNSAHRALQECEKMFGD
MMRSIERMQQEMTKLISSNKRAALNNAEGHMERLSHEIADLKRRDNEITQLSRTEDHIHF
IQSYHMLIAQTEAEELPTVSVNPYFTFGPVTKAVSEMKQHLNEFSNDELVKVAKAVNKMT
FCQLDDSKKKQSTKRESVRSDEAAMYKSVPVQEPQYREDFLRYACQLTLDSNTAYRQLYL
SRGNRKAALKRDPQSYGDSPARFDSLPQVLCREPLSGGAYYWEVDWSGEGAAIGVTYKGI
KRTGYGDSCRIGYNRKSWSLFCSDSSYSARHNKDQIEINAPYSSRIGVFLDHAGGTLSFY
AVGDTMSLIHRFKASFSEAVYPGFWVWYESAITIIQQ
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgaccaggacaactgctacctgtgtaaggaatacctcagggatcctgtgtcc
atcccatgtggccatgtcttctgctccgtttgcctgaaaacatattgggatcatgctgac
cacacaggttcatacctctgcccacaatgcaaggtcacctacaacaagaggcccacgccg
agacgcatcggaggctcccggcactccaccatccaacgcaactctgaatcttttccacct
ccacccccgtcccctgactacaactacgcaggaccccaggatgtaggttgtgacatctgc
attggtaagaagcacaaggctgtcaaaacctgcctgatgtgtctggcctcctactgcgag
aagcacctcaagcctcatttcgagtcagccacttttaaaaggcacaagctggtggatgaa
atcggccacctggacaggcagatctgcccccagcatcagaagggtctggagctgttctgt
cgcactgaccagatgtgtatctgtgtgttgtgtactgtgaaagaacacaaaggccacgac
atggtttctgctgagcaggagagggctgaggagcagcaacggctgggcgctacccaggct
gagatccaggagaaaattcatgaccgactcaagcagatggaggaactaaaacaagcagtt
gactcactcaagaactcagcccatagagcgctgcaggaatgcgagaagatgtttggcgac
atgatgcgctccattgagaggatgcagcaagaaatgaccaagctgatctcctccaacaag
agagcagcactcaacaatgcagagggccacatggagcgtctgagccatgagatcgctgac
ctgaaaaggagagacaacgagatcactcagctgtcccgcaccgaggaccacatccacttc
atccagagctaccacatgctgatagcccagacagaggctgaggagctgcctacagtgagt
gtcaacccctacttcaccttcggcccggtgactaaggccgtgtctgagatgaaacagcac
ttgaatgaattcagcaatgatgaactggttaaggtagccaaggcagtaaacaaaatgacc
ttctgtcaactggatgattccaaaaagaaacagtcaacaaaaagagaatcagtgagaagt
gatgaagctgccatgtacaagtctgtaccagtccaggaacctcagtacagggaggatttc
ctgagatatgcttgtcagctcactctggactcgaacacagcctacagacagctctactta
tctcgagggaacaggaaagctgccctcaagagagacccccagtcctacggtgacagccct
gctaggtttgactccctgccccaagtcctgtgtagagagcccctctctggaggcgcctac
tactgggaggttgactggagcggggagggggctgccatcggtgtcacctacaaaggaatc
aagagaaccggctatggagacagctgtcgcatcggctacaaccgcaagtcttggagcctc
ttctgctctgactccagctactcagcccgccacaacaaggaccagatagagatcaatgca
ccctattcctcccgtataggagtcttcctagatcatgctgggggcaccctctctttctac
gctgtaggggacaccatgtccctcatccaccgcttcaaggcctcttttagtgaagctgtc
tatccaggcttctgggtttggtatgagtcagccatcacaatcatccagcagtga
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