Lates calcarifer (barramundi perch): 108893395
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Entry
108893395 CDS
T04895
Name
(RefSeq) ruvB-like 2
KO
K11338
RuvB-like protein 2 [EC:
5.6.2.3
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108893395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108893395
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108893395
Enzymes [BR:
lcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
108893395
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
108893395
Chromatin remodeling factors
SRCAP complex
108893395
INO80 complex
108893395
INO80 complex (yeast)
108893395
SWR1 complex
108893395
ASTRA complex
108893395
Cilium and associated proteins [BR:
lcf03037
]
Motile cilia and associated proteins
Dynein assembly factors
108893395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
DnaB_C
AAA_22
RuvB_N
AAA_16
AAA_5
AAA_19
Mg_chelatase
ATPase
Sigma54_activat
nSTAND3
AAA_25
Zeta_toxin
Cdc6_lid
SLFN-g3_helicase
MS_channel_2nd
AAA_23
AAA_7
bpMoxR
AAA_17
NACHT
DEAD
ResIII
TsaE
AAA_11
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
108893395
NCBI-ProteinID:
XP_018546901
UniProt:
A0AAJ7VCP7
LinkDB
All DBs
Position
LG20:7876565..7881541
Genome browser
AA seq
459 aa
AA seq
DB search
MATPKVPEVRDIMRIERIGAHSHIRGLGLDDALEPRQVSQGMVGQLASRRAAGVILEMIK
DGHIAGRAVLIAGQPGTGKTAIAMGIAQSLGPDTPFTALAGSEIFSLEMSKTEALSQAFR
KAIGVRIKEETEIIEGEVVEIQIDRPATGTGAKVGKLTLKTTEMETIYDLGNKMIDSLSK
EKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGAQTQFVQCPEGELQKRKEVVHTVSL
HEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVCEWREEGKAEIIPGVLFIDEVHML
DMECFSFLNRALESDLSPVLIMATNRGITRIRGTNYQSPHGIPIDLLDRLLIIATSPYTE
KETRQILKIRCEEEDVELSEEAHTVLTRIGMETSLRYAIQLISTAGLVCRKRKGTEVQVE
DIKRVYSLFLDEARSSQYMKEYQDSFLFNETQNAPMDTS
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcccaaggttcccgaggttcgtgacataatgcggattgagagaattggtgca
cattctcacatccgtggcctcggtttggatgatgctttggagccaagacaggtctctcag
gggatggttggccagctggcctcccgtcgggcagcaggggtcattctggagatgatcaaa
gatggccatatcgctggcagggcagtactgattgctggccaacctggcacaggaaagact
gccattgctatgggcattgcccagtcccttggccctgatacacccttcacagcgctggcg
ggtagtgagattttctctctggagatgagcaaaaccgaggcactcagccaagcttttaga
aaagctattggagtgaggatcaaagaagaaacagagattattgagggagaggtggtggaa
atccagattgatagaccggccaccggaacgggtgccaaagtgggcaagctgaccctaaag
actactgagatggagacaatatatgacctgggcaacaagatgattgacagccttagtaaa
gagaaggtacaagcgggagatgttattaccattgacaaagccactggaaagatcagcaag
ctgggccgctccttcaccagagccagagactatgatgccatgggagctcagacacagttt
gtacaatgtccagagggagagctgcagaagaggaaagaggttgtccacacagtgtccctt
catgagatcgacgtcatcaacagccgtacacaaggcttcctggctctcttctctggagac
accggagaaatcaaatctgaagtccgcgagcagattaatgctaaagtgtgtgagtggagg
gaagagggcaaggcagagatcattccaggggtgttatttattgatgaggtccatatgctg
gacatggagtgcttttccttcctgaaccgtgcactggagagtgacctgtccccagttctc
attatggccaccaacagaggcatcactcgtatccgcggtacaaattatcagagccctcat
ggtatccctatcgacctgctggatcgcctgctcatcatcgccacctcgccttacaccgaa
aaagagacgaggcagatcctcaagatccggtgtgaggaggaggatgtggagctgagcgag
gaggctcatactgtcctgacccgcatcggcatggagacgtcactgcgctacgcaattcag
ctgatcagcactgcaggactggtgtgtcgcaaacgcaaggggacagaagttcaggtggag
gacattaaaagggtttattctctgttcctggatgaggccagatcctctcaatacatgaag
gagtaccaggattccttcctcttcaatgaaacacaaaatgctccaatggatacctcataa
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