Lates calcarifer (barramundi perch): 108893403
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Entry
108893403 CDS
T04895
Name
(RefSeq) rabankyrin-5
KO
K20129
rabankyrin-5
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108893403
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
108893403
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
FYVE
BTB
ANK_LRRK2
BACK
Ank_KRIT1
FYVE_2
FYVE_CARP1-2
zf_Tbcl_Rhp7
Motif
Other DBs
NCBI-GeneID:
108893403
NCBI-ProteinID:
XP_018546919
UniProt:
A0A4W6EBI6
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All DBs
Position
LG20:7982561..7995708
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AA seq
1166 aa
AA seq
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MAEEEVAKLQKHLALLRQEYVKMQQKLADTERRCAVLAAQATGQGSSSPAATDTFISRLL
DIVADLYQQEQYSDLKVKVAGEKLSAHKFVLAARSDVWSLANLASTSELDLSDCKPEVAM
AMLRWAYTDELELSEDDAFLIDLMKLANRFQLQLLRERCEKGVMSSVNVRNCIRFYQTAE
ELNATTLMNYCGEIIASHWDDLRKEDFSTMSAQLLYKMIKSKTEYPLHKAIKVEREDVVF
LYLIEMDSQLPGKLNELDNNGDLALDLALSRKLESIATTLVNNKADVDMVDQSGWSLLHK
AIQRGDEFASIFLIRHSAQVNAATVGAVETPLHLVCSFSPKKHSVEVMSGMARIAEALLK
TGANPNMQNSKGRTPLHEAVASGNEPVFSQLLQCKQLDLELKDHEGSTALWLALQYITVS
SDPSVNPFEDDAPVVNGTSFDENSFAAQLIQRGSNPDAPDTTAGNCLMQRAARAGNEAAA
LFLATHGAKVNHVNKWGESPLHTACRSGLASLTAELLQQGANPNLQTQKALPDDTLGVAL
QTPLHMAIAHNHPDVVSVILEQKANALHATNNFQIIPDFSLKDSVDQTVLGLALWTGMHI
IAAQLLGSGASINDTMSNGQTLLHMAIQRQDSKSALFLLEHQADINVRTQEGQTALQLAI
SNQLPLVVDAICTRGADMSVVNDKGDPPLWLALENGLEDIASTLVRHGCDATCWNTGPSG
CQQTLLHRAVDENNEVSACFLIRSGCDVNSPRRPGPNGEGDEEARDGQTPLHLASSWGLE
EVVQCLLEFGANVNAQDAEGRAPIHAAISSQHNVIIQLLISHPDIRLNIRDRQGMTPFAC
AMTHKNNKAAEAILKREPGAAEQVDNKGRNFLHVAVQNSDIESVLFLISVQANVNSRVQD
AAKLTPLHLAVQAGSEIIVRNLLLAGAKVNELTKHRQTALHLAAQQDLATICSVLLENGV
DFAAEDENGNNALHLAVMQGRLNNVRTLLTESNIDAEAFNLRGQSPMHVLGHYGKENAAA
IFELFLECMPEYPLDKPDNEGNTVLLLAYMKGNANLCRAIVRAGARLGINNNQGINIFNY
QVATKQLLFRLLDMLSKEPPWCDGSNCYECAAKFGVTTRKHHCRHCGRLLCHKCSIKEIP
IIKFDLNKPVRVCDICFDVLTLGGVS
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaggaggtggccaagctgcagaagcacctggccctgctcaggcaggagtat
gtgaagatgcagcagaagctggctgacacagagaggcgttgtgctgtgcttgctgctcag
gccactggccagggctcctccagccctgcagccacagacaccttcatcagccgtctgctg
gacatcgtggccgacctctatcagcaggaacagtacagtgatctgaaagtgaaagtggca
ggggagaagctcagtgcccataaatttgtattggctgcccgcagtgatgtctggagtctg
gccaacctggcctccacctctgaactggacctgtctgattgcaaacctgaggttgccatg
gcaatgttgcgctgggcatacactgatgagttggaactcagtgaggatgatgcctttctt
attgacttgatgaagctggcaaaccgcttccagcttcagctactcagagagagatgtgaa
aaaggtgtgatgtcctcagtgaatgtcaggaactgcattcgcttctaccagacagctgag
gagctaaatgccaccaccctgatgaactactgtggggagatcatcgccagtcactgggat
gatctgaggaaagaagatttcagcaccatgagtgctcaacttctgtacaagatgatcaaa
tctaaaaccgagtaccctctccataaagccatcaaagttgagcgagaagatgtggtcttt
ctctatctcatcgagatggactcacagctacccggcaaactaaatgaattagacaacaat
ggtgacctggcattagacctggcactctcccgtaaattggaaagtattgccaccactctg
gttaacaacaaagccgatgtggatatggtggaccagagtggctggagcctcctgcataag
gccatccaaagaggtgatgaatttgcctccatcttcctgattcgccactcagctcaggtg
aatgcagccacagtgggggctgtggaaaccccacttcacctggtctgttctttcagcccc
aagaaacactctgtggaggtgatgagtggcatggcacgaattgcagaggctctgctcaag
accggggccaaccccaacatgcagaacagcaagggcagaactccattgcatgaagctgtg
gcatcagggaatgagccagtgttcagccagctactacagtgcaagcagcttgacctggaa
ctcaaggaccatgagggcagcacagctttgtggctggccctgcagtatatcacagtgtct
tcagacccctcggtaaacccatttgaggatgatgcaccagtagtgaatggcacctcattt
gacgagaatagctttgctgcacagcttatccagagaggaagcaaccctgatgcacctgac
actaccgcaggaaactgcctcatgcagagagcagcccgagcaggcaatgaggcagctgct
cttttcctagctactcatggagcaaaggtcaaccatgtcaacaaatggggtgagagcccg
cttcatacagcatgtcgctctggcctggcaagcctgacggcagagctgctccagcagggg
gccaaccccaacctgcagacccagaaggctctgcctgacgacactcttggtgtggctctg
cagacccccctccacatggccattgctcacaaccacccagatgtggtctcggtcatcctt
gagcaaaaagccaatgcgcttcatgccaccaacaacttccagatcattccagacttcagt
ctcaaggattctgtggaccagaccgtgctgggcctggccctctggacaggtatgcacatt
atagcagctcagctgctgggctcaggggcttctatcaatgacactatgtccaatggacaa
accctgcttcatatggccatccagagacaggacagcaagagcgccctcttccttcttgag
catcaagcagacatcaacgttaggacccaagagggacaaacagcattacagttggccatc
agtaaccagctgcctttggtggtagatgccatttgcacaagaggagctgatatgtctgtg
gttaatgataaaggggaccctccactgtggctggctcttgagaatggcctagaagatatt
gcatccacgctggtccgccatggctgtgatgcgacttgttggaacacagggccctctggc
tgccagcagaccctcctgcacagagctgtcgatgagaataatgaggtctctgcttgcttc
ctcatccgcagtgggtgtgacgtgaacagccccaggcggccaggccctaacggggaagga
gatgaagaagcccgagatggacaaacgcccctccacctggcaagcagttggggactggag
gaggtggtgcagtgccttctagagtttggagctaatgttaatgcacaggatgcagagggc
agagctcccatccatgctgccattagcagccagcacaacgtcatcatacagctcctcatt
tcccatccagacattcgcctcaacattcgtgatcgtcaaggaatgaccccctttgcctgt
gccatgacgcacaagaacaataaggcagcagaggctatcctcaagagggagccaggtgct
gctgagcaggtggacaacaaaggccgcaactttctccatgtggctgtgcaaaattctgat
attgaaagtgtcctattcctcatcagtgtccaagctaatgtcaactccagggttcaggat
gcagccaaactcacccctctccacctggctgtccaggctggatctgagatcattgtccgc
aacttgctgcttgctggagccaaagtaaatgagctgacaaaacacagacagacagcacta
catttggctgcccaacaggacctggccactatttgttctgtgttgctggagaatggagta
gactttgctgctgaggatgagaatggcaataatgctctgcatctggctgtgatgcagggg
cgccttaacaatgtcagaacccttctcacagaatccaacattgatgctgaggcctttaat
ctcaggggtcagtcaccaatgcatgtactaggccattatgggaaagagaatgctgccgcc
atttttgagttgttcctggagtgtatgcctgaataccctctggacaaaccagataatgaa
ggaaacacagttctactcctggcctacatgaaaggaaatgcaaacctgtgccgtgccatc
gtgagggctggggctcgactgggcatcaataataatcagggcatcaacattttcaactac
caagtggcaaccaaacagttgctcttccgccttttagatatgctgtccaaagagccccct
tggtgcgatgggtccaactgttatgaatgtgctgccaagttcggtgttacaacaaggaaa
catcactgccgccactgtgggcgcctgttgtgccacaagtgctctataaaggagataccc
atcatcaagttcgacttgaacaagccggtgagggtgtgtgacatctgctttgatgtacta
actctgggtggggtatcgtaa
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