Lates calcarifer (barramundi perch): 108893428
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Entry
108893428 CDS
T04895
Symbol
gabra6b
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
lcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108893428 (gabra6b)
04082 Neuroactive ligand signaling
108893428 (gabra6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108893428 (gabra6b)
Ion channels [BR:
lcf04040
]
Ligand-gated channels
GABA-A
108893428 (gabra6b)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
108893428
NCBI-ProteinID:
XP_018546963
UniProt:
A0A4W6EMW6
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Position
LG20:17774234..17801700
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AA seq
476 aa
AA seq
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MLILKVDQGFLVVGCLRGMAFVLTCLFLSCYSVSSVWGNQHSETSIYLDNITRILDRLLD
GYDNRLRPGFGGPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIEIL
RLNNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLM
NFPMDGHACPLKFGSYAYPISEIVYTWKKGPLSSVEVPQESSSLLQYDLIGQTVSSERLK
SNTGEYVIMTVHFHLQRKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVL
TMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRKAAA
MKAAAQEAAAAAAAPAAATGNDGEVSSVDASSVLKKRMNSAPLFDRPAKTFPNPPVNAQA
FLQQGSAVPANNVLTGTSIIDKYSRILFPLSFGAFNLVYWIVYLTKDTMEMSRDTV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgctgattttaaaagttgaccagggatttctagttgtggggtgtttgcgaggcatggct
ttcgttttaacttgcttatttctgtcttgttacagtgtgagcagtgtttggggaaatcag
cacagtgagaccagtatctatttggataacatcacgcgcatattggatagattactggat
ggctatgacaacaggctgcgacctggatttggaggtccagttacagaggttaaaacagac
atctttgtcaccagctttggacctgtttcagatgttgagatggaatacaccatggacgtg
ttctttcgtcagacatggatagacgagcggctgaaatttgagggccccatcgagatcctg
cggctcaacaacctgatggtcagcaagatctggacgccagacacctttttccggaatggc
aagaggtcgatctctcacaacatgaccacccccaacaagctgttccgcatcatgcagaac
ggaactatcctctacactatgagattaactataaatgcggagtgccccatgcgtctgatg
aacttcccaatggacggccatgcctgcccactcaagtttgggagttatgcttatcccatc
agtgagattgtgtacacatggaagaaaggccccctttcctctgtggaggtgccacaggaa
tcatccagtctgctgcagtacgacctcatcggtcagacagtgtcaagtgagaggctaaag
tccaatacaggtgaatatgtgatcatgaccgtccacttccacctacaaaggaaaatgggc
ttcttcctgatccagacttacattccctgtattatgactgtcatcctggcccaagtctct
ttctggattaataaggaatcggttccagctcggactgtgtttggcatcaccactgtcttg
accatgacaacactcagtatcagcgcccggcactccctccccaaagtttcctacgccaca
gccatggactggttcattgctgtttgctttgcctttgtcttctctgccctgatcgagttt
gcggccgtcaactacttctccaccctgcaggccaaccgggagctgcgcaaggcagcggcg
atgaaggcggcggctcaagaggcagcagccgcagctgcagctccggctgcagcaacgggg
aatgatggagaggtttcctcggtggatgccagtagtgtgctgaagaagaggatgaactct
gctccgctgtttgaccgccctgccaaaacatttcccaacccacctgtcaatgcccaagcc
ttcctacagcagggttcagccgtaccggccaacaacgttctgactggcaccagcatcatc
gacaaatactcccgcatcctctttcccctttcgtttggcgccttcaacctggtctactgg
atcgtctatctcaccaaggacaccatggagatgtccagggataccgtctaa
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