Lates calcarifer (barramundi perch): 108893471
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Entry
108893471 CDS
T04895
Symbol
ssh2b
Name
(RefSeq) protein phosphatase Slingshot homolog 2b isoform X1
KO
K05766
protein phosphatase slingshot [EC:
3.1.3.16
3.1.3.48
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
108893471 (ssh2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108893471 (ssh2b)
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
108893471 (ssh2b)
3.1.3.48 protein-tyrosine-phosphatase
108893471 (ssh2b)
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Dual specificity phosphatases)
Slingshots
108893471 (ssh2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_SSH1-like_1st
DSPc
DEK_C
Y_phosphatase
Motif
Other DBs
NCBI-GeneID:
108893471
NCBI-ProteinID:
XP_018547044
UniProt:
A0AAJ7Q5B4
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All DBs
Position
LG20:complement(21100618..21123630)
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AA seq
1250 aa
AA seq
DB search
MPPGVVTAPRSSSAGCFCVCCGAKMRPHFTENSVISQGEIYQLISESFLTVKGAALFLPR
GNGSSPSSASRFSQLRSKHAGDIQQHLQTMFTLLRPEDNIKLAVRLESAHPHVTRYMVVV
STNGRQDTEESVVLGMDFSPVDSSCSVGLVLPLWSDTLIHLDGDGGFSVSTDNRVHVFKP
VSVQAMWSALQSLHKACEVARCHNYFPGSLFLTWVSYYQSRVSSDQARINEWNAMQDVQS
HRADSPVLFSDAPTERELTERQIKTSLREIMMQKDLENVTCKEIRTELEMHMTCNLREFK
EFIDNEMIVILGQMDSPTEIFDHVFLGSEWNASNLEELQKSGVQYILNVTREIDNFFPGV
FEYHNIRVYDEEATDLLAYWNDTYKFISRAKKAGSKCLVHCKMGISRSAATVIAYAMKEY
GWDLKKAFDYVKERRAVTKPNPSFMRQLEEYQGILLASKQRHNKLWRSHSDSDLSEHHEP
LSKSYAQPHSLGRSDPHNQASGTPGPSVKELLESLGTSASAGKVSHSTSQTDAGIQPNQL
SSSSFKGVAALPGDADAPSLEAPSHSAVAQSSQLDPPCPESTAGSVSPLSPPLSNGLCDA
EEQPPSPPLSQPRAATVVPEPQKTDMVTVAQSVLVGQPHPPPSLHHLPLSSAPSPTPACM
DEVVKPQVLSCPLPVTKPMLVSVPEPMTTASTQFAGPQCLSAPVPVKKTYCDQQMCGLSL
NGLAAHPPSTSDFISYPSAILQDNEMLFGHSADHINFFSAREKFKGMSQDGKTHCAVAQQ
SPQLKSCAKEQQPLLQVVSTSEGKEDEKIKEMTVPVQVTGLKPTVHADTSSLDTLSQPEP
QGPHNQEVRKLRQEIEDRDVSSQKETENVKEEVKNKEEEEVAPARLYSDWTRGSVRRVTR
QLEQRMKQEHDTPLPSSSPPSLSGSTSCSQRRLPSVQDASVCPEVSVVSTVQEEQEEDDG
KLGPVKSESGDVVEMGALGNNDRSTKGHKLQPADNRLLSTSSPLHHFGQSPFASVNFLCL
EGVTEFESGTDWDCSTEGFHSDIVMRETWETLCELGAFLQQVSVGGACKTRCVDHVFGLS
ARTTQKRGSSIQKRVREVEARIRQAGLTPPSLMKRSASLAKLGCLELLANDLSEWELSRS
SVSQPSAQPPVHTINDESKKQRVHDSPATAGQQPDVPGIGAERLSEAEETSPGISPAPTQ
SPQGGKVANTSQDSLHSPGPTLMATRQQYGRTHPLRRLKKRTVSTLYHTM
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccggtgttgtgactgcgccacggagctcgtcagccggctgcttctgcgtctgc
tgcggggcgaagatgagacctcatttcaccgagaactccgtgatctctcagggggaaatt
tatcagctcatcagtgaaagtttcctgacagttaaaggagctgctcttttcttacctcga
ggaaatggctcctccccttcttctgcctctcgcttttctcagctgcgcagcaaacatgca
ggagacatccagcagcacctgcaaaccatgttcactctcctcagaccagaggataacatc
aaattggcggttcgtttggagagtgcacaccctcacgtcacccgctacatggtggtggtc
tcaaccaacggccgtcaggacacggaggagagcgtggtgctgggaatggatttcagtcct
gtggatagttcatgttctgtagggctggttttgcctttatggagcgacacgttgattcat
ctggatggagatgggggtttcagtgtgtcaactgataacagagtgcatgttttcaagcct
gtttctgtgcaggccatgtggtcagccctccagtcgctccataaagcatgcgaggtggct
cgttgtcacaactacttcccaggcagcttgttcctcacctgggttagctactatcagagc
agggtctcctccgaccaggcacgcatcaacgagtggaatgccatgcaggatgtacagtca
caccgtgccgattcacccgtcctcttctctgatgcacctacagaaagagagctgacagag
cgtcagattaaaaccagtctgagggagatcatgatgcagaaagaccttgagaatgtcacc
tgcaaagagatccgcacagagctggaaatgcacatgacatgcaatctgcgagagttcaaa
gagttcatcgacaacgagatgattgtcattctgggccagatggacagtcctacagagatc
tttgatcacgtctttttgggatctgagtggaatgcatccaatttggaggagttgcagaag
agcggggttcagtacatcctgaatgtaacaagggagattgataacttcttccctggtgtg
tttgagtaccacaacatccgtgtttacgatgaggaggccaccgacctgcttgcctattgg
aatgacacctacaagtttatatctagagccaagaaagccgggtccaagtgtctggtgcac
tgtaaaatgggtataagtcgctctgcagccacggtgattgcttacgccatgaaggagtac
ggctgggatttgaaaaaagcctttgattatgtcaaggagcgtcgagctgtgaccaaaccc
aacccgtcttttatgagacagctggaggagtatcagggcatactgctggccagcaagcag
aggcacaacaaactgtggcgttctcactctgacagcgacctgtccgagcaccatgagcca
ctgtctaaatcctacgcccagcctcacagcctgggtcgctctgacccccataaccaggcc
agtggcacgcctggtccctctgtgaaagagctgctggaatcactgggaacttcggccagt
gctggcaaagtgtctcactccactagccagactgatgctggcatccagcccaatcagctc
agctcttcatccttcaagggggtggcagctctaccgggtgatgctgacgctccaagcctc
gaggctccttctcattctgctgtcgcccagagcagccagctggatcccccttgtcctgaa
tccacagctggctctgtgtctccgttatctcctccgctttccaatggcttatgtgacgct
gaggagcagcccccatcaccacctctctcccagccgagggccgccactgtggtgcctgag
cctcaaaagacagacatggtgactgttgcacagagtgttttggtgggccagccccaccca
cctccatcccttcaccacctccccctctcctctgctccgtccccgactccagcctgcatg
gatgaggttgtcaagccacaggtgttgtcctgccctctgcctgtgacaaaaccaatgtta
gtgtcagtgcctgagcccatgacaacagcaagcacacaatttgccggaccccagtgtctg
tctgcaccagtgcctgtcaaaaaaacatactgtgaccaacagatgtgtggcttgtctttg
aacggtttagcagcccatcctccctccactagtgattttatcagctatcccagtgccatt
ctgcaagacaatgagatgttgttcggccacagtgcagatcacattaactttttcagtgcc
agggaaaagttcaagggaatgagtcaagatggtaaaactcactgtgctgtggcgcagcag
tcgccccagctgaagagttgtgccaaggaacagcaaccactgcttcaagttgtctccact
agtgaggggaaggaggatgagaaaataaaggaaatgactgttcctgtgcaggtcacagga
ctgaaacctacagtacatgcagacacttcatctcttgacactcttagccaaccggagcct
cagggccctcacaaccaggaagtgaggaagttgaggcaggaaatagaggatagagatgtt
tcatcacaaaaggaaactgagaatgtaaaagaggaggtgaaaaacaaggaagaggaggag
gtggctcccgctcgtctctacagcgattggacgagggggtccgtgcggcgtgtcacgcgc
cagctggagcaaagaatgaaacaggagcacgatactccattgccctcgtcatctccaccg
tccctctccggcagtacctcctgctctcagcggcgtttgcccagcgtacaggatgcatca
gtttgcccggaggtgtcagtagttagcactgtgcaggaggagcaggaggaggatgatggg
aagcttggaccagttaaaagtgagagtggtgatgtagttgagatgggggcactaggaaat
aatgacagaagcacaaaaggacacaaactccagcctgctgataatagattgctctctacc
tcttctcctctccaccactttggccagtctccctttgcctctgtgaacttcctgtgtctg
gagggcgtgacagagtttgagtcaggcacagactgggactgctccacagagggattccat
agtgacattgtcatgagggagacatgggagactttgtgtgagctgggtgctttcctgcag
caagttagcgtgggtggagcttgcaagaccaggtgtgtggaccatgtttttggcctcagt
gccagaaccactcagaagcgaggcagcagcatccagaagagagtcagggaggtagaagcc
aggattcgccaggcggggctgacccctccatccttgatgaagcggtcagcctctttggcc
aaactgggttgtctggagctgctcgccaatgacctgagtgagtgggagctcagccgttcc
tctgtatctcagccctcagcacaacctccagtccacacaattaacgatgagtccaagaag
cagcgggtccacgattctcctgccacagctggccagcagccagatgtccccgggatcggt
gcggagagactctctgaagctgaggaaacctcacctggaatctctccagcaccgactcag
agcccacagggaggaaaagtcgctaacactagccaagattctctgcattcgcctgggcca
acacttatggcaacaaggcagcaatacggaaggactcaccccctgaggcggcttaagaaa
agaactgttagtaccctttaccacaccatgtaa
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integrated database retrieval system
