Lates calcarifer (barramundi perch): 108893492
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Entry
108893492 CDS
T04895
Symbol
bnip1b
Name
(RefSeq) vesicle transport protein SEC20
KO
K08497
protein transport protein SEC20
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108893492 (bnip1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108893492 (bnip1b)
Membrane trafficking [BR:
lcf04131
]
SNARE
SNAP-25[N] (Qb)
Sec20
108893492 (bnip1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec20
DUF4940
Met_synt_B12
Muted
Motif
Other DBs
NCBI-GeneID:
108893492
NCBI-ProteinID:
XP_018547082
UniProt:
A0A4W6F653
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All DBs
Position
LG20:19838815..19843430
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AA seq
230 aa
AA seq
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MASSADVHVRICGQEIIKYDLEIKALIQDIRDCPGPQSALRELNSQVKEKFIKLRLRIQD
LEQMAREQDRETDRQAIQAETESQRRQMLSNQTAWRKANLACKLAIDNMEKDELLRGAEN
QSTRQRKATKESLVETSSNITESLMSISRMMAEQVKQSEDTIGTLATSSRTVQETNEEFK
NMTGTIHLGRKLILKYNRRELTDKLLIFLALALFLATVLYILKKRLFPFI
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttctgcggacgttcacgtccgaatttgtggacaagaaattataaaatatgac
ctagaaatcaaggctctcattcaggacatcagggattgccccggacctcagtctgctctc
agagagctcaactctcaggtcaaagaaaagttcatcaagctcagactcagaatacaggat
ctggagcagatggccagagagcaggacagagagacagacagacaggccatccaggcagag
acagagagtcagcgaagacaaatgctgagtaaccagacagcgtggaggaaagctaacctg
gcctgtaaactggccatagacaacatggagaaagacgagctgctgcgtggagcagaaaac
cagagcaccagacagaggaaggccaccaaagaaagcctggtggagaccagcagcaacatc
acagagagtttgatgtctatcagcaggatgatggctgaacaggtgaagcagagcgaagac
accatcggcacactggccacttcctccaggacggtgcaggagaccaacgaggagtttaaa
aacatgacagggaccatccacctggggaggaaactgatcctgaagtacaaccggcgggag
ctgacagacaagctgctcatcttcctggctctggccctcttcctcgccaccgtcctctac
atccttaagaaacgtctcttccccttcatttag
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