Lates calcarifer (barramundi perch): 108893500
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Entry
108893500 CDS
T04895
Symbol
nsd1b
Name
(RefSeq) uncharacterized protein nsd1b
KO
K15588
[histone H3]-lysine36 N-dimethyltransferase NSD1 [EC:
2.1.1.357
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00310
Lysine degradation
lcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108893500 (nsd1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108893500 (nsd1b)
Enzymes [BR:
lcf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
108893500 (nsd1b)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
108893500 (nsd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
SET
PHD-1st_NSD
C5HCH
AWS
PHD_NSD
PHD
PHDvar_NSD
PHD_2
Motif
Other DBs
NCBI-GeneID:
108893500
NCBI-ProteinID:
XP_050934395
UniProt:
A0AAJ8BJV8
LinkDB
All DBs
Position
LG20:complement(15530186..15555659)
Genome browser
AA seq
2582 aa
AA seq
DB search
MSGPYAGPGRETHQSNCPLTPGRDLSTHSCSSRRHDHRIGVTMSAASSLKHASVYGFTQR
DHSSSSSSSSSTYSPLRRLQHLTTMVSQPDLVLPVREPDRSWEWGMHKKERGKETERGSW
ADCTSRDYSGTHNTSREESFGSSTAGQRQPEVQTGSKDAPAANRGNPIAPEKKTEGCFSG
PPSPAFSLDSNSPFANGFLHFESSLFEDDDNDQARETVSSGGDLQDKHERKGNVPQATPG
DLNSDSKDAVLSSAKVVTRSQSSGQRRRYWDGSDDEWESDTDLLLFVDSPSRHSMNSLKK
KSLPPVKFLEGEIIWAKFNRRPWWPCEVIIDPVQGVYHRVKEPSDRPCRLYHVRTFGEPV
EFIWVEEKSTHAFHGGFEFEQLPLLRRRGKQREQNYKYTIAKRFQDSWKSSVAEAESVLQ
DRPKMASSVSSSRDVAFHDSSTLEREKEAHPTFPPTTSPDSTLPETSHITNGSISSPVIS
SPVSTPAKPSTLKKSSGKKKSSKSSKDMNSKHSKKTLRNSPDKSDRDNEECPYSDLDSVP
KILCPKALERQPKLVQTQPSVAIVKEVKKQPEIQSGLWFSKSGKDRRPKTTSPMPDRNLF
SKACCKKKNLSAVSKKMLVTNASSGGGTSEQSGLSDKLKTLVPPEANLPPEQSGNLKCKN
TPVPNRLFGTTSSLADQSGLSDKQKSPVSVETGVSSDRCGYSKCRQTPSNTADMDILSDQ
FGFSEKSVFSESVKSISRMEHPDITANKKVHVNDQISDKAEERESNKTRVSGLDADTTEP
LAILEKQTSLVSKCRMPFVKLIRKDIKGKKFLNSSATISPTDQPECTMNENTLDNTVTKI
SSKQSDWVDGKVSASLDQAFSSESIKVSVVKLKASGGNGMLRLSSESSQGKTVVASNVAS
VSADELGSPEAERIQVLNVSPSNVTYPSSNQSESKTTPAPSVTSISSDQLGTSPQRITSI
TSASYNTVPPAHQQGNSASRSAHVPEGPSSEKSKKVHKSKQVPDELDKVIHEQPAHLPAS
NRLMTRALKAMQEAEQKKWEKAQKEAVMKEPLNPFRKAEDLVRHSARNSTSETKLDFCTK
MKSRKSHYNDNGEYDHDTFSSSSSPPQMFSDSTDFEADVKSEDEDLSISSTPPMDFIPLT
SRAKAKKEDNSSNIRSSSSPSSPFSFMNAFKNVEEVSFQSLTNENDGKPMSFKPDTNYKF
STFLMMLKDLHDTREREGAPLELEIGPPSAHVKEEPLVMPGEAKPTGHDQKLEHLNNNSN
SSPNKIIVTHSEGSTRPTSKRPYNRRGSCTGMKKKANRKVPCRPARSGPGFPGLESSRGL
ASLPTMDTSSGVDCSSRVQSLLGMQASSWERQAGGGEGVVQEEQEGERWSRVSENIQNMV
PLEQRRSDTTLCLGQPNGLVADCTETNTSLTHNAGVRDKAPTAHKRIRKPSKRLIEWTEE
YDQIFSTRKKTKKPLQLIGKATQPITSMSEPPGSDKNTHDHPSLNLLPEIQTPPPEEIAA
TTPPELQIPSTDSTASQDSTVLSIDTLTPPPEAEPSLSESLVKDNGTAPLLEKKRKRKPT
QKILEYCLEAEASTGPKKKVKTLKNNTNPAPQSDSGPPSLKSKSKQLTASTSTPTTPEVS
ASTLTPSTQTSLTPSTPAPANVVPVPPETEKVETASGDVVAPQPEDSKAQEVKKDTAESE
GDSSSLAHSFSSTKDDLSLCDDPLLPSRKIIGDRGGPASMKENICQVCEKTGELLLCEGQ
CCGAFHLPCISLAEAPKGKFVCPECKSGIHTCFVCKKRSEDVRRCMIPVCGKFYHGECIA
NYAPTAPVNRGFRCSIHVCLTCFIANPNSSSISKGRLVRCVRCPVAYHATDLCMAAGSVV
LSNNSIICPNHFTPRRGVKNHEHVNVSWCFVCTEGGSLLCCESCPAAFHRECLNIEMPKG
SWYCNDCKAGKKPRYKDILWVKVGRYRWWPAEVSHPKTIPENIQRMRHDVGEFPVHFFGS
NDYLWTYQARVFPYMDVDANSKEKMGKGVDATYKKALEEAAVRFRELQAEKELRQLQEDR
KNDRKPPPYKHIKVNRPIGKVQIFTADLSEIPRCNCKATDESPCGMDSECINRMLLYECH
PQVCPAGERCLNQAFTKRQYSQVEIFRTLSRGWGLRCVHDIKKGQFVSEYVGEVIDEEEC
RSRIRHAQENDICNFYMLTLDKDRIIDAGPKGNEARFMNHSCQPNCETQKWTVSGDTRVG
LFALVDVAAGTELTFNYNLECLGNGKTVCKCGAPNCSGFLGVRPKNNPPSDDKGRKLKRR
GHGKKKSKVVVTKEREDECFSCGDGGQMVSCKRPGCPKVYHADCLNLTKRPAGRWECPWH
QCDICGKEAASFCEMCPSSYCCQHRDGLLFISKLDGKLSCSEHDPCGPEPLEPGEIREYT
PEPRALTSGLGMAIIPSAASNTTTGLNQATRRVQEISAGAGMCASEAFPAFSIPVPITIP
VAAPAASPPPSSSDAPSSPQVFDLPHYSPISSYEEERDVLDEEEETEEGELLAEVEEELA
EEGEVGRQKSDPPEEDGETVMEDIGLEYLEIKEEEDEDDEDEDEDEEEEEEEEEEEEEEE
EE
NT seq
7749 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggccttatgcaggccctggcagggagacccatcagtccaactgccctttgacc
cctggccgtgacctctccacccactcttgctcttccaggcgccatgaccacaggatcggt
gtaaccatgtctgctgcctcctccctcaagcatgcatcagtctatgggttcacacaaagg
gaccactcctcctcctcctcctcctcatcttctacctacagtcctcttaggaggctgcag
catctcaccaccatggtgagccagcctgacctggtcctgccggtcagggagccggacaga
agctgggagtgggggatgcataagaaggagagggggaaggagacagagaggggttcctgg
gcagattgcactagcagggattattctggcacccacaatacaagcagggaggagagtttt
gggagctcaactgctggacaaagacaacctgaggtccagactggaagtaaagatgcacca
gcagccaatcggggcaatcccatcgccccagagaaaaagacagaaggttgtttctcaggc
ccgcccagcccggccttctctctggatagcaacagtccctttgctaatggcttcctccat
tttgaatcttctttatttgaggatgatgacaatgatcaagcacgagagaccgtgtcatca
gggggagacttgcaggacaaacacgagaggaaggggaatgttcctcaggccactcctgga
gacttaaattcagactctaaggatgctgtcctgtcgtcagccaaggtcgtcacccggtcc
cagtcctcaggtcaacgcagaagatactgggacggctcagatgacgaatgggagagtgac
accgatctgctcctgtttgtggatagtccctcaaggcattcaatgaacagcctgaagaaa
aagtctttgccgcctgtgaagtttttagagggtgagattatttgggcaaagttcaaccga
agaccatggtggccctgtgaagtgatcattgaccccgtacagggagtctatcacagagtg
aaagagcccagtgaccgtccctgccggctctaccatgttaggacctttggtgagcctgta
gagttcatctgggtagaggaaaaatcaactcatgctttccacggaggttttgaattcgaa
cagctccccctactgcgtcggagggggaagcaaagggagcagaactacaaatacactatt
gcaaagcgttttcaggactcttggaaatccagtgtggcagaagctgaatctgttctccaa
gacagacccaaaatggcttcctctgtttcttcgtccagagatgttgccttccacgacagt
tccactctggagagagagaaagaggcccatccgacctttcctcccaccacctcacctgat
tccaccctgcctgagacatcacacataaccaatggatccatttcatccccagttatttca
tcccctgtatcaactccagcaaagccaagcactttaaagaagtcttctggcaagaagaaa
tcaagtaaatcatctaaagacatgaatagtaaacactctaaaaagacattgcggaatagc
ccagacaaatcagatagagacaatgaagagtgtccatattctgacctcgactcagtccct
aagattttgtgtcctaaagcacttgaacgtcagccaaagctagttcagactcaaccatct
gttgcaattgttaaagaggtgaagaagcagccagagattcagagtggtctttggttcagt
aaatcaggcaaagacaggcgacctaaaacaaccagtccgatgccagaccgaaatctcttc
agtaaggcatgctgtaagaaaaagaacctatctgctgttagtaaaaagatgctagttaca
aatgcctcctccggtggcgggaccagtgagcagtcaggattgtcagacaagcttaagact
cttgtaccccctgaagcaaatctgcctcctgaacagtcaggaaatttgaagtgtaaaaac
accccagttcctaataggctttttggtacaactagcagtcttgcagaccagtcaggacta
tcagacaagcagaagtccccagtctctgtcgagactggtgtgtcctctgacaggtgtgga
tactcaaagtgtagacagacacccagtaatacagctgacatggacattctttctgaccag
tttggtttcagtgaaaaatcagtgttttcagagagtgtaaagagcatcagtcgaatggaa
catcctgacattacagccaataaaaaggtccatgtaaatgaccagatttctgataaagca
gaagaaagagaaagtaacaaaactcgagtgtctggtttagatgctgacactactgaacca
ttagcaattctagaaaagcaaacaagtctggtctctaagtgtaggatgccctttgtcaaa
ttaatacgcaaagacataaagggtaagaagttcctaaactctagtgcaaccattagtcca
actgaccaacctgaatgcacaatgaatgaaaatacactagataatactgtgactaaaatt
tcctccaaacaatcagactgggtggatggaaaagtaagtgcctctttagatcaggcattc
agttcagaatccataaaggtctcagttgtgaagttaaaagcaagtggtgggaatggtatg
cttcgtctctcatcggaatcatcacaagggaaaactgttgtggcctccaatgtggcaagt
gtgtctgctgatgaattaggtagcccagaagctgaaaggatacaagttttaaatgttagc
cctagcaatgtgacatacccatcctctaatcagtcagaaagtaagacaactcctgccccc
agtgtaacaagtatttcttctgaccagttaggcacctcaccacaaagaataacttctatc
actagcgcgtcttataacacggttccgcctgctcaccagcaagggaattcagcatctagg
agtgcccatgttcctgaaggcccgtcttctgagaaatccaagaaagtccacaaatcaaag
caggttccagatgaactggataaagtcattcatgaacaacctgcccaccttccagccagc
aatcggctaatgaccagagccctgaaggctatgcaggaggcagagcagaagaagtgggaa
aaagcccaaaaggaggctgtgatgaaagaacccttaaatccatttagaaaagctgaggac
cttgtgcgccattctgcacgtaactccacttcagagaccaaacttgacttttgcactaaa
atgaagtctcgtaagtctcattataatgataatggtgagtatgatcacgacacattttct
agttctagcagccccccccagatgttttcggattcaactgactttgaagctgatgtcaag
agcgaagatgaagacctctctatatcctcaactccaccaatggacttcataccccttacg
tctagagcaaaagcaaagaaggaggataattcctctaacatacgctcctcatcttcacct
tcctcaccattttcttttatgaatgcctttaaaaatgtggaggaggtatccttccagtcc
ctgacaaatgagaatgatggtaaacctatgtctttcaaaccagacacaaactacaagttc
agcacttttctcatgatgttgaaagacttgcatgacactagagagcgagaaggggcccca
ttagaactggagattgggccaccaagtgcacatgttaaggaggagcccttagtgatgcct
ggggaggccaaacccacaggccatgatcaaaaacttgaacatcttaataacaattcaaat
tcaagtccaaacaaaatcatagtcacacacagtgaaggcagcacaagaccaacgtcgaag
aggccctataacagaaggggtagctgcactggaatgaaaaagaaagccaaccgcaaagtg
ccttgtcgtcctgccaggtctggacctggtttcccaggactggagtcctcacgaggactg
gcatccttgccaacaatggacacttcatcaggagtggattgctcatcaagagtccagtcc
ctcttgggcatgcaggccagcagctgggagaggcaggctggaggtggtgagggagtagtt
caggaggagcaggagggggagaggtggagcagagtcagtgagaatatacagaacatggtg
cctttggagcagaggaggtccgacactacactgtgtctgggacagccgaatggccttgtt
gcagactgcactgagactaacacaagcttgacgcacaacgctggagtacgtgacaaggct
ccaacagcacataaacgcataagaaaaccaagcaaaaggctgattgaatggactgaagaa
tatgatcagattttctccacaaggaagaaaaccaaaaagcctctccagttgattggaaag
gccactcaacccattacctccatgtctgaacccccgggatcagacaagaacacacatgac
cacccatccttgaacctacttcctgaaatacagacaccacctcctgaggaaatcgctgca
acaacgccccctgaactacagattcccagcactgacagcacagcttcccaagattcaaca
gtgctttccattgacacgctaacacctcctcctgaagctgaaccttcgctgtcagagagc
cttgtcaaagacaacgggactgctcctctgctggagaagaagaggaagaggaaacccact
cagaagatcctggagtactgtctggaggcagaggcttcaacaggccccaaaaagaaggtc
aaaacactgaagaacaatacaaatcctgcccctcaatcagattcagggccaccatcttta
aaatcaaagagtaagcagcttacagcatccacctccacaccgacgaccccagaggtttct
gcctctacactcacgccctccactcagaccagtctcacccccagcactcctgcacctgcc
aatgttgtgccagttccgcctgaaacggaaaaagtggagacggcgtccggagatgtcgtt
gctcctcagccagaggacagtaaggctcaggaggtcaaaaaggacacagcagagtcagag
ggtgactcgtccagcttggctcacagcttctcctccacgaaggacgacttgtcgctgtgt
gacgacccacttttaccctcaaggaagatcataggggaccgaggaggccctgcctccatg
aaggagaacatatgtcaggtgtgtgagaagacgggggagctgctgctctgtgagggtcag
tgctgtggagccttccacctgccctgcatctctctggccgaggcgccaaaagggaagttt
gtctgtcctgagtgcaaatcaggcatccacacctgctttgtatgtaaaaagcgcagtgaa
gatgtgcggcgctgtatgatcccagtgtgtgggaagttttaccacggcgagtgtatcgcc
aactacgccccaactgcacctgtgaaccgaggcttccgctgctccatccacgtctgtctc
acctgcttcatcgccaatcccaacagctcgtccatctctaaaggtcgtctggtacggtgc
gtacgctgcccagtggcctatcatgcaacagacctgtgcatggcagcaggcagcgttgtc
ctctccaacaacagcatcatctgtcccaaccacttcaccccccgtcgcggcgtcaagaac
catgaacacgtcaacgtcagctggtgctttgtctgcactgagggaggaagtctgctgtgc
tgcgagtcctgtcctgctgccttccaccgggagtgtctgaacattgagatgcctaaaggc
agctggtactgcaacgactgcaaggctgggaagaaacctcgctacaaggacatcctctgg
gtgaaagttgggcggtacaggtggtggccggcggaggtcagccatcccaaaacgatccca
gagaatattcagcggatgaggcacgatgtcggggagttccctgttcacttttttggctcc
aatgattacctgtggacctaccaggccagagtcttcccttacatggacgtggacgccaac
agcaaagaaaagatggggaaaggtgttgatgccacctacaagaaagctctggaggaggcg
gctgtgcgatttcgagagctgcaggcagagaaggagcttcgtcagcttcaagaggacagg
aagaacgacaggaaacctcctccatacaaacatattaaggtgaatcgaccgataggaaag
gttcagatctttacagccgacctatcagagatcccgcgctgcaactgtaaggcaacagac
gagagcccgtgtgggatggactcagagtgcatcaaccgcatgctgctgtacgaatgccac
ccgcaggtttgcccggcgggtgaacggtgcctcaaccaggcgttcaccaaacgtcagtac
agccaggtggagatcttcaggacgctgtcccgaggctgggggctccgctgcgtccatgac
atcaagaagggtcagtttgtgagcgagtacgttggggaggtgatcgacgaggaggagtgc
aggtcaaggatcagacacgcacaggagaacgacatctgcaacttctacatgctaactctg
gacaaggaccggatcatcgatgctgggccgaaggggaatgaggctcgcttcatgaaccac
agctgtcagccgaactgtgagacccagaagtggacggtgagcggagacacccgggtggga
ctgtttgctctcgtcgatgtcgctgcaggcacagagcttaccttcaactacaacctggag
tgtttggggaatgggaagacagtgtgtaaatgtggagcaccaaactgcagcggcttcctg
ggtgtcaggccaaagaacaaccctccatcagatgacaaaggtcggaagctgaagaggaga
ggccacggcaagaagaagagcaaggtggtggtgaccaaagaaagggaggatgagtgtttc
agctgtggagacggaggacagatggtttcctgtaagagacctggatgtcctaaagtctac
cacgccgactgcctcaacctcaccaagaggcctgcaggtcgatgggaatgtccatggcac
cagtgtgacatatgcggtaaagaggcagcgtccttctgtgagatgtgtcctagttcttac
tgttgccagcaccgcgatggcctgctcttcatctccaagctggacggcaagctgtcctgc
agcgagcacgacccctgtgggcctgaaccgctggaaccaggggagattcgggagtacaca
cctgaacccagagccctgacctcggggctgggcatggccatcatcccctccgctgcttct
aatacgaccaccggtctgaaccaagccaccaggagggtccaggagatcagcgctggcgct
ggcatgtgtgcttctgaggcgtttcctgctttttccatccccgtccccatcaccattccc
gtcgctgctcccgccgcctcgcctccccctagcagctctgacgctcctagcagcccgcag
gtgtttgacctcccgcactactcgcccatctcttcgtatgaggaggagagggacgtctta
gacgaggaagaggagacagaggagggggagctgctggcagaagtggaggaggagttagcc
gaagagggagaggtggggaggcagaaatcggatcctcccgaagaggatggggagacggtg
atggaggacatcgggctggaatacctggagatcaaagaagaggaggatgaggatgatgag
gatgaggatgaggatgaggaagaggaagaagaggaagaagaggaggaagaggaagaggag
gaggagtga
DBGET
integrated database retrieval system
