Lates calcarifer (barramundi perch): 108893572
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Entry
108893572 CDS
T04895
Name
(RefSeq) zinc finger and BTB domain-containing protein 20
KO
K10501
zinc finger and BTB domain-containing protein 20
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108893572
04121 Ubiquitin system [BR:
lcf04121
]
108893572
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
108893572
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
108893572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
BTB
zf-H2C2_2
zf-C2H2_4
zf-C2HC_2
zf-C2H2_6
zf-C2H2_15
BTB_KLHL33
zf-met
zf-C2H2_jaz
zf-Di19
Zf-C2H2_ZNF451_2nd
zf-C2H2_2
BolA
zf-C2H2_11
zf-C2H2_ZNF462_1st
Motif
Other DBs
NCBI-GeneID:
108893572
NCBI-ProteinID:
XP_018547230
UniProt:
A0AAJ7Q5E3
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All DBs
Position
LG20:13313934..13348953
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AA seq
680 aa
AA seq
DB search
MTERIHNINLHNFSNSVLETLNEQRNRGHFCDVTVRIHGSMLRAHRCVLAAGSPFFQDKL
LLGYSDIEIPSVVSVQSIQKLIDFMYSGILRVSQSEALQILTAASILQIKTVIDECTRIV
SQNVGLAGPGGFPVIPGDSGQETPRGTPESGTSGPSSDAESGYMQTTSQQSMDRAYTSLY
TYPGLSLQNGTRDRPLYINPPNYDSTLSTQKDQQSQDPPWMNRIQERSQQVDRFISTAES
THCRKQPRPVRIQTGGMHIKQEAEDEYSWGDNLGDCPDDADHTEAVESESKVESFDSGVS
SSISTEPDAMEQQPYLTGFSREGSGDGQQGEGAPVQIEVNDSSPEQVQETEDGDTSHSTS
DSSMMQPLPNSVMSQSLPSATHYMRQAESHTSNLRMPLTVTSNSQVMGTAGSTFLPTLFT
PQQSREKPFLYLSGQQQPQFVAVPPPAMPSFPNPMSVPQAPAQQQQAAGGIGQGEKKPYE
CTLCSKTFTAKQNYVKHMFVHTGEKPHQCSICWRSFSLKDYLIKHMVTHTGVRAYQCSIC
NKRFTQKSSLNVHMRLHRGEKSYECYICKKKFSHKTLLERHMALHSTGSAITGLSGSAGT
PGPVSIPMPMAVPEPGPGVVALAMPVSGGAGVGAGVGTGVGVAAEASCQEGTTYVCSVCP
AKFDQMEHFNDHMRMHVSDG
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcgcattcataacatcaatctccacaacttcagcaattctgtacttgagacc
ctcaatgagcagcgcaaccgtgggcacttctgtgacgtgactgttcggatccatggaagt
atgctgcgagctcaccggtgcgtgctggctgctggaagccccttctttcaggacaagctg
ctcttgggctacagcgacattgagatcccttctgtggtctcagtgcaatccatccaaaag
ctgattgactttatgtacagtgggattctacgggtatctcaatcagaggccctgcagatc
cttactgctgccagcatcctacagatcaagaccgtcattgatgagtgtacccgcatcgtg
tcccagaatgtgggcctggcggggccgggggggttccctgttataccaggagactctggt
caggaaacgccccgtggcacgccagagtctggcacctctgggcccagcagcgacgcagag
tcaggttatatgcaaacaacatcacagcaaagcatggatcgtgcatacacatcactgtac
acctaccctggcctctctctgcagaacggcacccgcgaccgccccctttacattaaccct
ccaaattatgattcgactctcagcactcagaaggaccagcaatctcaagatccaccctgg
atgaaccgcatccaggagagatctcagcaggttgatcgcttcatctccacagcagagtcc
actcactgccgcaagcaaccccgaccggtacgcatacaaacaggagggatgcacataaag
caggaggctgaagatgagtacagctggggggacaatttgggggactgcccagacgatgct
gaccacactgaggctgtagagagtgaatccaaggttgaaagttttgactcaggggtgagc
tcctccatcagtactgagccagatgctatggagcagcagccgtacctgactggctttagc
cgagaggggagcggggacgggcagcaaggtgaaggagctccagtgcagatagaggtcaat
gactcgtccccagagcaagtgcaagagacagaggacggggacacatcccacagcactagt
gacagtagcatgatgcagcccctgccaaactcagtcatgtcccaatccctgccaagtgcc
acgcactacatgcgccaggcagaatcacacaccagcaatctgaggatgccgctcaccgtg
accagcaattcccaagtgatgggcactgctggaagcaccttcctgcccacactctttact
ccacagcagtctagagagaagcctttcctttacctttctggccagcagcagccacagttt
gtggcagtgccgccccctgcaatgccatcattcccgaaccccatgtcggtaccgcaagcg
ccagctcagcagcaacaggctgccggaggaattggtcagggggaaaagaagccctatgaa
tgcactctctgcagtaaaacctttactgcaaaacagaactacgtcaaacacatgtttgtc
catactggtgagaagcctcatcagtgcagcatctgctggcgctcgttctccctgaaggat
tacttaatcaaacacatggtgacacacacaggggtgcgggcctaccagtgcagcatctgc
aacaagcgtttcacccagaagagctctctcaatgtccacatgcggctgcaccgtggagag
aagtcctatgagtgctacatctgtaagaagaagttctcacacaagaccctgctggagagg
cacatggccctgcacagcacaggcagcgccatcacagggctgtcggggagcgcaggcacc
ccggggcccgtctccattcccatgcctatggctgtccctgagcctggacctggagtggtg
gccctcgccatgccagtgagtggaggtgctggagtaggggctggggttggaacaggagtg
ggtgtagctgcagaagcgagctgccaagaagggaccacctacgtgtgctccgtctgccct
gccaagttcgaccaaatggagcacttcaatgaccacatgcgaatgcatgtctccgatgga
taa
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