Lates calcarifer (barramundi perch): 108893631
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Entry
108893631 CDS
T04895
Symbol
hnrnpl
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein L isoform X1
KO
K13159
heterogeneous nuclear ribonucleoprotein L
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108893631 (hnrnpl)
Spliceosome [BR:
lcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
108893631 (hnrnpl)
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_10
RRM_occluded
RRM_3
DUF4523
Motif
Other DBs
NCBI-GeneID:
108893631
NCBI-ProteinID:
XP_018547326
UniProt:
A0A4W6DWY9
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Position
LG20:6135540..6144944
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AA seq
529 aa
AA seq
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MAAAAGRYYGEGGRATKRQKTEDGGMTTESYDDPHKPLPSPVVHIRGLVDGIMEADLVEA
LQEFGAISYVVMMPKKRQALVEYEDMNGSCNAVTYAAENQVYIAGHPAFINYSTSQKISR
PGDSDDTRSVNNVLLLTIINPIYPITTDVLYTICNNCGPVQRIVIFRKNGVQAMVEFDSV
QSAQRAKASLNGADIYSGCCTLKIEYAKPARLNVFKNDQDTWDYTNPNLSGQDADGEGNW
NSSQDPNANPNKRQRQPALLGDHPPDYGGPQGGYHGYNDDSYGPPPPHRMGPGMGGRGRG
SQRYGPGYGPPPPEYGPHADSPVLMVYGLEPSKINADKVFNIFCLYGNVERVKFMKSKPG
AAMVEMGDCYSVDRAITHLNNNFLFGQKLNVCVSKQQAIVPGQCYQLEDNTSSFKDFHGS
RNNRFTSPEQAAKNRIQHPSNVLHFFNAQPDISAEIFNQVCDELGIKSPTSVKLFTGKSE
RSSSGLLEWESINDAMEALAMMNHYQMKNPSGPYPYTLKLCFSTTHHAN
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgctgcgggccgatactacggagaaggtggcagagcgacgaaaagacagaaa
actgaggacggaggaatgacaacggagagctatgatgaccctcataaaccgctaccctcc
ccggtggtgcacatcaggggcttggtggacggtataatggaggctgacctggtggaggcc
ctgcaggagtttggggccatcagttatgtggttatgatgcccaagaagcgccaggccctg
gtggagtatgaggacatgaatggctcctgcaatgctgttacgtatgctgcggagaaccag
gtttacattgctggccaccctgccttcatcaattactccaccagccaaaagatctcccgg
ccaggagactcagacgacacccggagcgtcaataacgtgttgctgctcacaatcataaac
cccatctatcctataactacggatgtgctctacaccatttgtaacaactgtggtcctgta
cagaggattgtcatcttcagaaagaatggtgttcaggccatggttgaatttgattcggtc
caaagtgctcagagggctaaagcctctctgaatggagcagacatctattctggctgttgc
actctaaagatcgagtatgccaagccagcgcgccttaatgtcttcaagaacgaccaagac
acgtgggactacacaaaccccaacctaagtggccaagatgctgatggtgaaggcaattgg
aacagttcacaagatcccaatgccaatcccaacaagcgccagaggcagcctgctcttctg
ggagaccacccacctgattatggtggccctcaaggtgggtatcatggctacaatgacgac
agctacggtccccctcctccccaccgtatggggccagggatgggtgggcgtggtcggggt
agccagcgctatggtcctggatacggaccgccaccccctgagtacggaccacacgctgac
tccccagttcttatggtgtatggccttgagccctccaagattaatgctgacaaggtcttc
aacatcttctgcctctatggcaatgtagagagggttaagttcatgaagagtaagcctggc
gcagcaatggtggaaatgggagactgctactctgtggacagggccatcactcacctcaac
aataacttcctttttggacagaaacttaatgtttgtgtgtccaagcagcaggccattgtg
ccaggacagtgttaccagttagaggacaacaccagcagcttcaaagatttccatggatca
cgcaacaaccgcttcacctccccagagcaggcagccaaaaaccgaatccagcaccccagc
aatgtcctccacttctttaatgcacagcctgacatatctgcagagatctttaaccaggtc
tgtgatgaacttggaattaagagccccacaagtgtgaaactgttcactggaaagagtgag
cgaagttcatctggcctgctggagtgggaatccatcaatgatgccatggaagccctagct
atgatgaaccattaccagatgaaaaaccctagtgggccttacccttacacattgaagctg
tgtttctcaaccacacaccatgccaactaa
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