Lates calcarifer (barramundi perch): 108893637
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Entry
108893637 CDS
T04895
Name
(RefSeq) leucine-rich repeat and WD repeat-containing protein 1 isoform X1
KO
K24733
leucine-rich repeat and WD repeat-containing protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108893637
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
108893637
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Gene cluster
GFIT
Motif
Pfam:
WD_LRWD1
LRR_LRWD1
LRR_4
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
LRR_8
WD40_WDHD1_1st
Beta-prop_SPT8
WD40_Prp19
Beta-prop_CAF1B_HIR1
LRR_9
WDR55
LRR_EndoS
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
108893637
NCBI-ProteinID:
XP_018547335
UniProt:
A0A4W6BP66
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Position
LG20:22265594..22274093
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AA seq
744 aa
AA seq
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MEKITEKLLLEKGSPKTNKLEQIKTLNLSKMGLKHQDLPVRLLSRLQSLEQWDLSGNRLQ
ELPKNLKLPALRCLDLSDNQMEDVTTLESLSSLEELKMEDNLYITVSDNHKMMVLLPNLR
IFNGKDVSPTANHLRYVYTDNLRTRVIAVWEKSFHLPDPITAEKLSSLEKEFVNAARQQV
RFGPSSVSDFTKWKVEIIAKEYLHSLTEPQKEPESNELTDIKENSEISTPTKRKQTTSVK
DSDISLTPRKQLRTDLPASSGEDSPRKSSLRLKPLKTLSQADAVRMSPRKTGQPPSTPTR
KQMRAETPRRASKVQQAKEDGAQIKQKEDFKATKLQRDTDMLPTLKSCSKTQQPLCLKPL
HVLQCHSKQDSSEDFSTQLWACAFQQLPNSTGSSGGSRLVATCGGDSLCVIDCETGMVMK
KYKVLGEEFFSLAWSTVLMSRGGGAPAQHCSILAAGGKRGLVKLIHPRNNMAYGEFRASR
KALSVLRFNHHKGNFLFSGSYDNKIIMWDIGGVDSQYNYKVVQLLVLEISATPLHICLPP
TSPSANLLTACEDGLHCFNTQLGTNNTKRSKEMEITFPIYKKEDKDHDYHTIDGLSFLTD
DIVASKNYLHNSIYLWSWNRTKAQRPDKKNRTVCAVVLAELQWANTEIPYLALNTCPGQA
YIVCGDDKGRLWTYHVTNLQRNSFQTGKPILPTEVLEWPAPVRNGLGHVEGPSINSVAMD
PELQYLVALSDKNMVIVWKREESS
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaataacagagaaacttctactggagaaaggctctccaaaaaccaacaaactg
gagcaaatcaagacactgaatctatctaagatgggcctgaagcaccaggacttgccagtc
aggctgctgtcccgtctccagtcccttgagcagtgggatctgtctgggaacagactgcag
gagttgcccaagaacctgaagctgcctgcgcttcgctgcctggacctcagtgacaaccag
atggaggatgttacaactctggagtctctgagcagtctggaagagcttaagatggaggac
aacctatatatcactgtgagtgataatcacaagatgatggtgttgttgcccaacctgagg
attttcaatggtaaagatgtcagtcctactgccaaccacttgcgctacgtctacactgac
aacctgaggaccagggtaattgcagtttgggagaagagcttccacctccctgatcccatc
acagcagagaaactgtccagcctggagaaagaattcgtcaatgctgcccgtcagcaggtt
agatttggaccgagttcagtcagtgacttcaccaaatggaaggtggagattatagctaag
gagtacctgcactctctgacagaaccacagaaagaacctgagagcaacgagttgacggat
ataaaagagaacagtgaaatctcaactcctaccaagaggaaacaaactacatcagtaaag
gactctgacataagcctgacgcctcgcaaacagttgcgcacagatctcccagcctcatca
ggagaagacagtcctcgtaaatccagcctccgcctcaaaccactgaagacactaagccag
gccgatgctgtcaggatgagcccccgcaagacaggtcagcctccctctacccctaccaga
aaacagatgagggcagagacacccaggagggcttctaaagtgcagcaagccaaagaggat
ggagctcagattaaacagaaggaagattttaaagccacaaagctgcagagagatactgac
atgctacctacactgaagagctgcagcaagacacagcagccattgtgtctgaagcctctc
catgtactccagtgccacagtaaacaggacagctcagaggatttctccacccaactgtgg
gcctgtgctttccagcagctaccaaattcaactggcagtagtggaggaagccgtttggtt
gcaacctgtggaggagactctctctgcgtgattgactgtgaaacagggatggtgatgaag
aagtacaaagttcttggggaggagttcttctcgctggcctggtccacagtgttgatgtcc
aggggaggaggggccccggctcaacattgcagcattctggcagctggtggaaagagagga
ttggtcaaattgatccacccgagaaacaacatggcctacggggagttcagagccagccgc
aaagccctgtctgtcctccgcttcaaccaccacaagggaaacttcctcttctcgggatcg
tacgacaacaagataatcatgtgggacattggtggagtggacagccagtacaactacaaa
gttgttcagctgctggtgttggaaatcagtgccacccctctgcacatctgcctccctccc
acctcccccagcgctaacctactaactgcctgtgaggacggtctgcactgcttcaacacg
caactcggtaccaacaacacgaagagatccaaggagatggagataactttccctatatat
aagaaggaagacaaagaccatgactaccataccattgatggcctgagttttcttacagat
gacatagtggcctccaagaactacctgcacaactccatttacttgtggagctggaacagg
accaaggctcagcggcctgacaagaagaacaggacagtgtgtgctgtggttcttgctgaa
ctgcagtgggccaacactgaaattccctacctggctctcaacacctgccctggccaagcc
tacatagtgtgcggtgatgacaaaggcaggctgtggacataccacgtcaccaacctacag
agaaacagtttccagacagggaaacccatactgcccactgaggtgttggagtggccagca
ccggtgaggaatggactgggccatgtggagggcccctccatcaacagtgtagcaatggac
cctgagctacaatacctggtggccctcagtgacaagaatatggtgatagtgtggaaaaga
gaggagtcctcctga
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