Lates calcarifer (barramundi perch): 108893649
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Entry
108893649 CDS
T04895
Symbol
cpeb4b
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 4b isoform X1
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04114
Oocyte meiosis
lcf04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
108893649 (cpeb4b)
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
108893649 (cpeb4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108893649 (cpeb4b)
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108893649 (cpeb4b)
Factors involved in mRNA localization
Trans-acting binding proteins
108893649 (cpeb4b)
mRNA cycle factors
P-body specific factors
108893649 (cpeb4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
zf-U1
Motif
Other DBs
NCBI-GeneID:
108893649
NCBI-ProteinID:
XP_018547360
UniProt:
A0A4W6EZ14
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Position
LG20:complement(19117328..19149191)
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AA seq
753 aa
AA seq
DB search
MGDYGFGVLVQNNTGNKSAFPVRIHPHLQPPHHHQNVSQSPAAFINSTTAAGNGTTGGSP
WLFPASATHNSVQDEILGGPEKPKAQQQQEMQETQEKQQQLSPGSHQEGGSGGGIISELE
KARSEEAKTDNGTSEGSNGKEKQLRLESPVLTGFDYQETSGLGGTGPVQSSTTSSSLTGF
NNWSAAIPPAPSTIINEDVSFFNPASANNGPLLFQNFSHHVSPGFGGNFSPQIGPAAALS
QHHPAPPPHPHFQHPHNQHQQHRRSPASPHPPPPFPHRNPAFSQLPHLSNSLNKPPSPWG
PASYQSPSPSPGSSTSWSPGGGYGSGGGGWGGSQGRDYRRGLNGGMTPINSISPLKKTFP
NNHVASQKYPRNSPAGFNPKSWMDDGVGRSDNIFPFQERTRSFDSFNMNTLESSLIDIMR
AEQDTLKGRLGFPHPGGDNPLPLNARNYSRRRGHSSLFPMEDGFPDDERGDQGLAGLGSP
HCFPHQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGHLFVDWPHKAESKSYFPPKG
YAFLLFQDESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLNDSDFVMDGSQPL
DPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYI
AAISARFVQLQHGEIDKRVEVKPYVLDDQLCDECQGTRCGGKFAPFFCANVTCLQYYCEY
CWAAIHSRAGREFHKPLVKEGGDRPRHISFRWN
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgggggattacgggtttggagtcctagttcaaaacaacactggcaacaagtctgcattc
ccggtccgaatccacccgcatctgcagcccccacaccaccaccagaatgtgtcgcagagc
cctgctgctttcataaacagcaccacagccgcagggaatggcaccacgggaggctctccc
tggctcttccctgcctctgccacccacaacagcgtgcaagacgaaatcctggggggccca
gagaagcccaaagcacagcagcaacaggaaatgcaggaaacgcaagaaaagcagcagcag
ttgtcccctgggagtcaccaggagggtggaagtggtggtgggatcatttcagaactggaa
aaagcccggtcagaggaagccaagacagacaacggcacatctgaaggaagtaacggaaag
gagaagcagctacgtctcgagtctccagtcctgacaggctttgactaccaggagacatct
ggtctcgggggaacaggcccagtccagtccagtacaacctcgtcatcacttactggcttc
aacaactggtcggctgccatcccgccggcaccatcaaccatcatcaatgaggacgtcagc
ttcttcaacccggcgtctgccaacaatgggcccctgctgttccagaacttctcacaccac
gtcagtccaggatttggggggaacttctccccccagatcggaccagcggcagccttgtcc
cagcaccaccctgctcccccgccacacccccacttccaacatccccacaaccaacaccag
cagcaccggcgctccccagcctctccacaccctccaccgccctttccgcacaggaatccg
gctttcagccagttgccgcatttgtccaacagcctgaacaagcccccgtccccctggggt
ccagccagctaccagagcccctctccctcccctggttcctccacctcctggagtcctgga
ggaggctatggtagtggtggcggtggctggggagggtctcagggcagagattatcgcagg
gggctgaacggcgggatgacccccatcaactctatctctccactgaagaagaccttccct
aacaaccacgtggcatcccagaagtatcctcgaaacagtcccgccggcttcaaccccaag
tcctggatggatgatggagtcggccgcagtgataacatcttcccctttcaggaacgcacc
aggtcatttgacagcttcaacatgaacacactggagagctccctgatcgacatcatgagg
gctgagcaggacaccctgaaaggtcgtcttgggtttccccatccaggcggggacaaccct
ctgcccctcaatgccaggaattatagcaggagacgaggccactcttctctcttccccatg
gaggatggtttcccagatgatgagcgtggagatcagggtctcgcgggcctgggatctcca
cactgctttccacaccagaacggagagcgtgttgaacgctactcgcgcaaggtctttgtc
ggaggactgcccccggatatagacgaagatgagataacagccagtttccggcgttttgga
cacctgtttgtggactggcctcacaaagctgagagcaaatcctatttcccccccaaaggc
tatgccttcctgctgttccaggatgagagctccgtgcaggctttgatcgatgcctgcatc
gaggaggacggcaagctgtacctctgtgtgtccagccccaccatcaaagacaagccggtc
cagatccgcccatggaacctgaatgacagcgattttgtgatggatggatctcagcccctg
gacccgaggaaaaccatctttgtgggaggtgtccctcgtccgctccgtgcagtggagctg
gccatgatcatggaccgcctgtatggtggcgtttgctacgctggcattgacacagaccct
gagctgaagtaccccaaaggagcggggcgggttgccttctctaatcagcagagctacatt
gctgctatcagtgctcgctttgtacagctgcagcatggagaaatcgataaacgggtggaa
gtgaagccatacgtactggatgaccagttgtgtgatgagtgccaggggactcgctgcggc
ggcaagtttgcaccgttcttctgcgccaacgtcacctgtctgcagtactactgcgagtac
tgctgggcggccatccactcgcgtgccggacgagagtttcacaaacccctggtgaaggag
ggaggcgaccgaccccgtcacatctccttccgctggaactga
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