Lates calcarifer (barramundi perch): 108893651
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Entry
108893651 CDS
T04895
Name
(RefSeq) claudin-18-like
KO
K06087
claudin
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03272
Virion - Hepatitis viruses
lcf04382
Cornified envelope formation
lcf04514
Cell adhesion molecules
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
108893651
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108893651
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108893651
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108893651
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108893651
04147 Exosome [BR:
lcf04147
]
108893651
04515 Cell adhesion molecules [BR:
lcf04515
]
108893651
Cilium and associated proteins [BR:
lcf03037
]
Other cilia and associated proteins
Stereociliary proteins
108893651
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
108893651
Exosomal proteins of colorectal cancer cells
108893651
Cell adhesion molecules [BR:
lcf04515
]
Immunoglobulin superfamily
L1 family
108893651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF2178
Motif
Other DBs
NCBI-GeneID:
108893651
NCBI-ProteinID:
XP_018547364
UniProt:
A0A4W6FNQ7
A0AAJ7VD11
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All DBs
Position
LG20:complement(21254770..21259913)
Genome browser
AA seq
477 aa
AA seq
DB search
MVSGGRQILGTALALIGFLGSIIICALPTWKVTAFIGANIVTSQVIWEGLWMNCVTQSTG
QMQCKVYDSLLALPQDLQAARALVVIAIITGVFGILLAVVGGKCTNFVEDERQKSKVAIA
AGIVFIVAGLLVLIPVCWTANTIIRDFYNPVLTNAQRRELYTMASMGMQMLASALCLLGW
AGVIISCILPMWKVTAFVGSTIVTSQTIWEGIWMTCVVQSTGQMQCKPYDSLLALGGDLQ
AARALTVLAIATGGIGLILAFVGGKCTRFLDEKGVGVKGKVAVAAGAVLIVTGLLCLIPT
SWAAGAVVRKFYSASIDAQRREIGACLYIGWGASLLLILGGGLFISSACPIKAHDTDKNP
SVRYLVVRSSNGSRPPSARSLPAGAGFPRSQSVGASTKSQLYTSPPWEHELDQSFRQESE
NSWAPSTKSLKRPDSTKSEKSEALSTKSQLEKAEMENLSTVNSDNEDASSNPAKTYL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccggtggaagacagattctgggtacggccctggccctcatcggctttctgggg
agtatcatcatctgcgctcttcccacgtggaaagtcacagccttcattggtgccaacatt
gtcacatctcaggtgatctgggaaggcttgtggatgaactgtgtgacacagagtacaggc
cagatgcagtgcaaggtctatgactctctcctggccttacctcaggacctgcaggctgcc
agggcactggtcgtcatcgccatcatcactggggtctttgggatccttctcgctgtggtt
gggggaaagtgcaccaacttcgtggaggacgaaaggcagaagagcaaagtggccatcgct
gctgggatcgtcttcatcgtcgcaggccttttggtgctcatccctgtctgctggaccgcc
aacaccatcattcgtgatttctacaaccctgtcctgaccaacgctcagaggagggaactc
tacaccatggcctcgatggggatgcagatgctggccagcgccctgtgcctcctgggttgg
gcaggggtcatcatcagttgcatactgcccatgtggaaggtcacggccttcgtgggcagc
accatcgtcacctcccagaccatctgggagggcatctggatgacctgtgtggtccagagc
acggggcagatgcagtgcaaaccctacgactccctcctcgccctcggcggtgacctgcag
gccgccagggctctcaccgtcctcgccatcgccacgggtggcataggcctcattctggcc
tttgtcggagggaagtgcacccgtttcttggatgaaaaaggagtcggggttaagggcaag
gtggccgtagcagcgggagcagtgttgattgtcacagggctgctgtgtttgatccccacg
tcttgggcagctggggcggtggtgaggaagttctacagtgcctccatagatgctcagcgg
agagagatcggagcctgtctctacattgggtggggagcatccctattgctcatcctggga
gggggtttgttcatcagctctgcgtgccccatcaaagcccatgacacagacaagaaccct
tccgtccgctacctggtggtccgctcctccaacgggtccaggccgccgtcagcaaggtcc
ctgcccgccggagcagggtttccccgctctcaaagcgtgggagcgtccactaagtctcag
ctgtacacaagccctccctgggagcacgagctggatcagagcttcaggcaggagtcagaa
aactcatgggcaccgtcaacaaagtctctgaagaggccagattccacaaaatctgaaaaa
agtgaggcgttgtctacaaagtctcagctggaaaaagcagaaatggagaatttatcgaca
gtcaacagtgataatgaggacgcatcctcaaatccagcaaagacatacctataa
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