KEGG   Lates calcarifer (barramundi perch): 108893651
Entry
108893651         CDS       T04895                                 
Name
(RefSeq) claudin-18-like
  KO
K06087  claudin
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03272  Virion - Hepatitis viruses
lcf04382  Cornified envelope formation
lcf04514  Cell adhesion molecules
lcf04530  Tight junction
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    108893651
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    108893651
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    108893651
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    108893651
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:lcf03037]
    108893651
   04147 Exosome [BR:lcf04147]
    108893651
   04515 Cell adhesion molecules [BR:lcf04515]
    108893651
Cilium and associated proteins [BR:lcf03037]
 Other cilia and associated proteins
  Stereociliary proteins
   108893651
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   108893651
  Exosomal proteins of colorectal cancer cells
   108893651
Cell adhesion molecules [BR:lcf04515]
 Immunoglobulin superfamily
  L1 family
   108893651
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 DUF2178
Other DBs
NCBI-GeneID: 108893651
NCBI-ProteinID: XP_018547364
UniProt: A0A4W6FNQ7 A0AAJ7VD11
LinkDB
Position
LG20:complement(21254770..21259913)
AA seq 477 aa
MVSGGRQILGTALALIGFLGSIIICALPTWKVTAFIGANIVTSQVIWEGLWMNCVTQSTG
QMQCKVYDSLLALPQDLQAARALVVIAIITGVFGILLAVVGGKCTNFVEDERQKSKVAIA
AGIVFIVAGLLVLIPVCWTANTIIRDFYNPVLTNAQRRELYTMASMGMQMLASALCLLGW
AGVIISCILPMWKVTAFVGSTIVTSQTIWEGIWMTCVVQSTGQMQCKPYDSLLALGGDLQ
AARALTVLAIATGGIGLILAFVGGKCTRFLDEKGVGVKGKVAVAAGAVLIVTGLLCLIPT
SWAAGAVVRKFYSASIDAQRREIGACLYIGWGASLLLILGGGLFISSACPIKAHDTDKNP
SVRYLVVRSSNGSRPPSARSLPAGAGFPRSQSVGASTKSQLYTSPPWEHELDQSFRQESE
NSWAPSTKSLKRPDSTKSEKSEALSTKSQLEKAEMENLSTVNSDNEDASSNPAKTYL
NT seq 1434 nt   +upstreamnt  +downstreamnt
atggtgtccggtggaagacagattctgggtacggccctggccctcatcggctttctgggg
agtatcatcatctgcgctcttcccacgtggaaagtcacagccttcattggtgccaacatt
gtcacatctcaggtgatctgggaaggcttgtggatgaactgtgtgacacagagtacaggc
cagatgcagtgcaaggtctatgactctctcctggccttacctcaggacctgcaggctgcc
agggcactggtcgtcatcgccatcatcactggggtctttgggatccttctcgctgtggtt
gggggaaagtgcaccaacttcgtggaggacgaaaggcagaagagcaaagtggccatcgct
gctgggatcgtcttcatcgtcgcaggccttttggtgctcatccctgtctgctggaccgcc
aacaccatcattcgtgatttctacaaccctgtcctgaccaacgctcagaggagggaactc
tacaccatggcctcgatggggatgcagatgctggccagcgccctgtgcctcctgggttgg
gcaggggtcatcatcagttgcatactgcccatgtggaaggtcacggccttcgtgggcagc
accatcgtcacctcccagaccatctgggagggcatctggatgacctgtgtggtccagagc
acggggcagatgcagtgcaaaccctacgactccctcctcgccctcggcggtgacctgcag
gccgccagggctctcaccgtcctcgccatcgccacgggtggcataggcctcattctggcc
tttgtcggagggaagtgcacccgtttcttggatgaaaaaggagtcggggttaagggcaag
gtggccgtagcagcgggagcagtgttgattgtcacagggctgctgtgtttgatccccacg
tcttgggcagctggggcggtggtgaggaagttctacagtgcctccatagatgctcagcgg
agagagatcggagcctgtctctacattgggtggggagcatccctattgctcatcctggga
gggggtttgttcatcagctctgcgtgccccatcaaagcccatgacacagacaagaaccct
tccgtccgctacctggtggtccgctcctccaacgggtccaggccgccgtcagcaaggtcc
ctgcccgccggagcagggtttccccgctctcaaagcgtgggagcgtccactaagtctcag
ctgtacacaagccctccctgggagcacgagctggatcagagcttcaggcaggagtcagaa
aactcatgggcaccgtcaacaaagtctctgaagaggccagattccacaaaatctgaaaaa
agtgaggcgttgtctacaaagtctcagctggaaaaagcagaaatggagaatttatcgaca
gtcaacagtgataatgaggacgcatcctcaaatccagcaaagacatacctataa

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