Lates calcarifer (barramundi perch): 108893653
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Entry
108893653 CDS
T04895
Name
(RefSeq) RING finger protein 145
KO
K23789
E3 ubiquitin-protein ligase RNF145 [EC:
2.3.2.27
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108893653
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108893653
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108893653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRC8_N
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_11
zf-RING_5
zf-ANAPC11
Prok-RING_4
Rtf2
Motif
Other DBs
NCBI-GeneID:
108893653
NCBI-ProteinID:
XP_018547368
UniProt:
A0A4W6F0W3
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All DBs
Position
LG20:19599480..19615874
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AA seq
762 aa
AA seq
DB search
MAVKDRVEAVLNVGLRVPSIMLLDVLYRWDVSSFFQKIQRSSLSNNPLFQYKYLALYLHY
VGYILSLVLLTLPRQHLVKLYLYVLTALLLFAGHQVSRDYVRSELESGYEGPVYLEPLSM
NRFTTALIGQLVVCTLCSCVMQTKRIWLFSAHLLPLVARLCLVPLETIVFINKFSMIFTG
LEVIYFLASNLLVPYNLAKTAYRELAQVVEVYGLLALGMSLWNQLVLPVLFMCFWLLLFA
LQIYSYFSTRDQPTSRERLLFLFLTSIAECCSTPYSLLGLVFTVSFIALGVLTLCKFYLQ
GYRAFMNDNTMHRGMTEGITLLILAVQTGLIELQVIHRAFLLSIILFIVVASILQSMLEI
ADPIVLALGASRDKSLWKHFRAVSLCLFLLIFPAYMAYMICQFFHMDFWLLIIISSSILT
SLQVLGTLLIYVLFMVEEFRKAPVENMDEVIYCVNGTYRLLEFLVAVCVVCYGVSETVFG
EWSVMGSTIILVHSYYNVWLRAQLGWQSFLLRRDAVNKIKSLPTASNTQLEQYNDICAIC
YQDMNTAVITPCSHFFHAGCLKKWLYVQETCPLCHSQLKSQSPAASVPNQDTPAANQNPA
GQGEATAKKRQEDGASPDDRMEEATGEQEQEAPGMSTGETSSSSSGAPSAPQHLVETPSP
SSSSSPLMTDSLQSQLATDHPSSSSSDTLDRPPCLPALSHTSIPCVSHHSSSLLQAQPEM
IPPAEAEAAPPSTLGNQESSSGPSSQLDQPTSEEQSHPPCSL
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgaaggaccgtgtcgaggcggtgctcaatgtgggtctgcgtgttcccagcatc
atgcttctggatgtcctctaccgctgggacgtcagctccttcttccagaagatccagcgt
tccagcctctccaacaatcccttgttccagtacaaatacctggcactctacctgcactac
gtaggttacatcctgagcttggtgctcctgactctgcctcgtcagcacctggttaaactg
tacttgtatgtccttacggctttgctgctgtttgctggtcaccaagtttcaagggattat
gtccgcagtgaactggagtctggctatgaaggacctgtctacctggaacctctctccatg
aacagattcaccaccgcactcataggtcagctggtagtgtgtacactttgttcctgtgtg
atgcagaccaagaggatctggcttttctctgctcaccttcttcctttggtggccagactg
tgtctggtcccactggagaccattgtcttcatcaataagttctccatgatctttacaggc
ctggaagtcatttacttcctggcttctaacttactggtaccatataacctggctaagacg
gcctacagggagctggctcaggtggtggaggtgtatgggctgctagctttgggtatgtct
ctatggaaccaactggtccttccagttctcttcatgtgtttctggctgctgctgtttgct
ctgcagatctactcctacttcagcaccagagaccagcctacctcaagggagaggctcctt
ttcctctttcttaccagtattgcagaatgttgcagtacaccgtactccctcctgggtctg
gttttcactgtctccttcatcgctctgggggttctaacactctgcaaattctacctgcaa
ggctacagagcctttatgaatgacaacaccatgcacagagggatgacagaagggatcacc
ctgctgatcctcgctgtccagactggcctgatagagctgcaagtcatccaccgagccttc
ctcctctccatcatcctcttcattgttgtcgcttccatcctgcagtccatgctggagata
gcagaccctatagtcctggctctgggagcatcccgagacaagagtttgtggaagcacttt
cgagcagtgtctctgtgtctgttcctgctgatctttccagcgtacatggcctatatgatc
tgtcagttcttccacatggacttctggcttctcatcatcatctcttcctccatcctcacc
tcactgcaggttctcggcactctgctgatctacgttctgttcatggtggaggagttccgt
aaggctccagtagagaacatggatgaagttatctattgtgtaaatggaacctatcgattg
ctggaattcctggtggcggtgtgtgtggtgtgctatggcgtgtcagagacggtgttcggg
gaatggagcgtgatgggaagcaccattatcctagtgcactcgtactataatgtctggctc
agagcccagctgggctggcagagcttcctgctcaggagagatgctgtaaacaagatcaaa
agcctccccacggccagcaacacacagctggaacagtacaacgacatctgtgccatctgc
taccaggatatgaacacagctgtgatcactccatgcagtcatttcttccacgctggctgt
ctgaagaaatggctttatgtccaggagacatgtcctctttgccactcgcaactcaagagc
caatcaccagccgctagtgtccccaaccaagacacacctgcagccaatcagaaccctgca
gggcagggagaagccacagccaagaagaggcaggaagatggcgcttctccagatgacagg
atggaagaggcaacaggagagcaggagcaagaagcacctggcatgtcaactggagaaact
tcctcctcttcctccggtgcaccctctgctccccagcaccttgttgagactccatcacca
tcttcttcttcttccccactcatgactgattctctgcagagccagttggccacagatcat
ccctcttcctcctcctcagacaccttggacaggcctccctgtcttccagctctctctcac
acctccatcccttgtgtctctcaccactcgtcctcactgctacaggcccagccagagatg
atcccccctgctgaagctgaggctgccccaccctccacactgggcaaccaggagtcatct
tctggtccatcatcacagcttgaccagcccacatctgaggaacagtctcatcctccatgc
agcctctga
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integrated database retrieval system
