Lates calcarifer (barramundi perch): 108893732
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Entry
108893732 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: protein NEDD1
KO
K16547
protein NEDD1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108893732
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108893732
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
108893732
Microtubules and associated factors
gamma-tubulin ring complex
108893732
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
108893732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
EIF3I
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
NBCH_WD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_LRRK2
Beta-prop_NWD2_C
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
PQQ_3
KNTC1_N
PQQ_2
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
108893732
NCBI-ProteinID:
XP_018547532
UniProt:
A0AAJ7Q601
LinkDB
All DBs
Position
LG10:2543643..2551407
Genome browser
AA seq
663 aa
AA seq
DB search
MEEVTRLVSTGDCVKLWDAVSMAPLEQFNPHSTSHPVAQACWSSNNHYLVSSSSSGDKLV
VSSLKSTPVPLVELAEGKKQTRVCLSSSSQFLVSGGLDHCVHIWDLKTKRLHRSLKDHKE
EVTCVSFNANDSYIASGSTSGDLVLHSLTTNLSSKPFGHGSNQPIHDLRLSMLKRSLLGS
VSDSGTVVLWDSNTQKELHVFDSAHKAPGSGLAFSPASELLVVSVGLDKKIVCYDTASKI
VLRSIRVDSPLTSVDFTLDGTGLVVGSTQGKIYQYDLRNSSAPTRVTVAHKTSVTCLRFQ
SNTSRHKSSKLGSTKIASAKRSSTKVTSNQQDPAPSTGPAPQRQVMGTAGGAGVEVMSRE
AEGQQGTEQPAAVEKFSSVGRSSLDMFSPAREDLRTPGTAGDTPFGRTHVTSLEMLSREG
EGQPVIGRASLDIFSPVREDFHSGPNSHRKTPLGTPLVASAGRCFSPLSVFQTPPTIKEE
EPVAAAAAEPCDPRKSDKASSSSLEGEVQTTPTSSQQTSHSQPAPPFFTPEPSLRRANGI
QAQLSYDSPVHGAPPSAAAGPALSAAVSSSLSQNIADVVGQGGAAPLTSLQIHFIQNMIH
ETLEDFRDACHRDIVNLQVEMVRQFYIQLNEIHGLIEKYSVNESLVEEIEKLKEENRRLR
TNY
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtgacccgcttggtgtcgacaggagactgtgtgaagctctgggatgcggtt
tccatggcgccgctggagcagtttaacccacacagcaccagccaccctgtcgcacaggcc
tgctggagctccaacaaccattacctggtcagttccagcagcagcggagacaaactggtg
gtttccagcctcaagtcgactcctgttccactggtggaactggccgaggggaaaaagcag
acccgcgtgtgtctgagttcatcgtctcagtttctggttagtggaggtctggatcactgt
gttcacatctgggacctgaagaccaagaggctccaccgctcccttaaggaccataaagaa
gaggtgacctgtgtgtccttcaacgccaacgacagctacatcgcctccggctccaccagt
ggagatctggtcctccacagtctgaccaccaacctgtccagcaaacccttcggccacggc
agcaaccagcccatccacgacctgaggctgtccatgctgaagcgctccctgctgggcagc
gtgtctgacagcggcaccgtggtcctgtgggactccaacacccagaaggagctccatgtt
ttcgacagcgcccacaaggccccgggctccggcctggccttctcccccgccagtgagctg
ctggtggtcagcgtcggcctggacaagaagatcgtctgctacgacaccgccagcaagatc
gtcctgaggtcgatccgtgtggacagtcctctgacatcagtggacttcactctggacggt
actggtctggtggtcggatccactcaggggaagatctaccagtacgacctgaggaactcc
agcgcccccaccagggtcaccgtggcacataaaacctcagtcacctgccttcgcttccag
agcaacaccagcagacacaagtccagtaaactgggctccaccaagatcgccagcgctaag
agatcctcaaccaaagtgaccagcaaccagcaagaccccgcccctagcacaggccccgcc
cctcagagacaggtgatgggtacagcagggggcgccggtgtggaggtgatgtcccgggag
gccgagggccaacaggggacggagcagccggccgccgtggagaagttcagcagcgttgga
cgaagcagtctggatatgttttctcctgcacgggaagacctgaggacacctgggacggct
ggagacacgccgtttggaagaactcacgttaccagtttggagatgttatccagagaaggg
gagggtcagccggtgatcggtcgggccagtctggacatcttctccccggtcagagaagac
tttcactcgggtcccaactctcatcgtaagacccccctgggaacccctctggtggcctct
gcgggtcgatgcttcagcccgctgtccgtcttccagacccccccaacgatcaaggaagaa
gagccggtcgctgctgcagctgctgaaccgtgtgaccccaggaagtctgacaaggccagc
agttccagtctggagggggaggttcagaccacgcccacgtcatcccagcagaccagtcac
agccagccagccccacccttcttcactccggagcccagcctccgcagagccaatggcatc
caagctcagctgagctacgactcacctgtccacggagctccgccctctgcagcagcaggt
ccagctctgtcggcggccgtctcctcctctctctcccagaacatcgcagacgtggtcgga
cagggaggagctgctcctctcacctccctgcagatccacttcatccagaacatgatccat
gaaaccctggaggacttcagggacgcctgccacagagacatcgtcaacctccaggtggag
atggtccgacagttttacatccagctgaacgagatccacggcctgatagagaaatactct
gtgaacgagtctctggtggaggagatcgagaagctgaaggaggagaaccgcaggctgagg
accaactactga
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