Lates calcarifer (barramundi perch): 108893741
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Entry
108893741 CDS
T04895
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25 isoform X1
KO
K11849
ubiquitin carboxyl-terminal hydrolase 25 [EC:
3.4.19.12
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108893741
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108893741
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108893741
Peptidases and inhibitors [BR:
lcf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108893741
Ubiquitin system [BR:
lcf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108893741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP_UIM_N
UBA_8
UIM
UBA_4
PhnI
Selenoprotein_S
UIM_2
Motif
Other DBs
NCBI-GeneID:
108893741
NCBI-ProteinID:
XP_018547560
UniProt:
A0A4W6E338
LinkDB
All DBs
Position
LG20:complement(6329939..6355218)
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AA seq
1168 aa
AA seq
DB search
MTVEQNVLQQHSQKHQQTLLNQLREITGTTDIQLLQQALQVSNGDLAEAVAFLTEKNAKV
PQQDETTYYQTSQVASDRYISVGSQADTNVIDLTGDDKDDLQRAIALSLEESSRAFRETG
ITDEEQAISRVLEASIAENKASLKRTHTEVWSDSPNPHDRKRIDNCPVGLKNVGNTCWFS
AVIQSLFNLLEFQRLVLNYSPPARVHDLPRNQKEHRNLPFMQELRNLFSLMVGSKRKYVD
PSRAVEILKDAFKSSESQQQDVSEFTHKLLDWLEDAFQMKAEEDREGEKPKNPMVELFYG
RFLAVGVLEGKKFENTEMFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSAENSARSGQE
HWFTELPPVLTFELSRFEFNQALGRPEKIHNKLEFPSMLYMDRYMDRNREITRIKREEIR
RLKEHLTLLQQRLERYLSYGSGPKRFPLADVLQYAMEFASSKPVCTSPVEDIDSSAPPGG
TTGQQLPPPNTAEQDSLAPLESSGPASGPTTAPTAAQQQRVPIHKPFTQSRLPPDLPMHP
APRHITEEELRVLEGCLHRWRSEVENDTRDLQGSITRIHRTIELMYSDKSMMQVPYRLHA
VLVHEGQANAGHYWAYIYDPHQRSWMKYNDISVTKSSWEELVRDSFGGYRNASAYCLMYI
NDKKPFLIEEEFDKETGQILSGMDKLPPDLKQYVKEDNELFDKEIEEWDTMQARKAQQEK
LALATAATAASAASSTSTSSSSPQPMSIESSPPDNAVPQQDPEYMEQPSPTNDSKHLQED
TERAISRAAAEQEERSPEALLNASLPSPTSPQPEVQLSTPSTPPPDLVMEDESPGQRTVE
VAIPNVGTFVIESEEGGYDDEAMMTPNMQGIIMAIGKSSSVYEKNGPEAAFFKAIKLEYA
RLLRFAQEDTPPENDYRLQHIIVYFIQNQAPKKILERTLLTQFADRNLAFDERCKSIMNV
ARAKLDLIKPEEVNMDEYEIWHQDYRNFRETTIFMTTGLELFQKTNYVEALMYLIYSYQY
NKELLSKGLYRGHDEELLGHYRRECLLKLNEQAAAMFESGEEPEVTTGLGIMNELVVPCI
PLLLIHDTERDLLAVEDMRNRWCSYLGQEMESNLQEKLTDFLPKLLDCSTEIKSFHDPPK
LPSYSTLELCERFSRIMAALGRVPTEGR
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtggagcagaatgtcctccagcagcattctcagaagcatcagcagacgctacta
aaccagttgagggagatcacgggcaccacagacattcagctgcttcagcaggctctgcag
gtgagcaatggagacctggccgaggctgtagcctttctgacggagaagaatgctaaggtt
cctcagcaagatgagacaacctactaccagacatcccaggtggccagcgacagatatatc
agcgtgggcagccaagcagacacaaatgttattgacctgactggggatgataaagatgac
ctgcagagggctatcgccctcagcctggaggagtccagccgggcatttagggagacgggc
atcactgatgaggagcaggccatcagcagagttttggaggccagcatagcagagaacaag
gcaagtctgaagcgaacccacacagaggtatggagtgattcacccaatccgcatgacagg
aagaggatagataactgccctgtggggctgaaaaatgttggcaatacctgctggttcagt
gctgtcatacagtctctgttcaacctgctggagttccagaggctggtgctcaactactct
ccaccagccagagtccatgacttgcctcgcaaccagaaagagcacaggaacttgcccttc
atgcaggagctacggaacctcttttccctcatggtcgggtccaagaggaaatatgtggat
ccgtcacgagctgtggaaatcctcaaagacgcctttaagtccagtgagtcacagcagcag
gatgtgagcgaattcacccacaagctgctggactggctggaggacgccttccagatgaag
gctgaagaagacagggagggtgaaaagccaaagaaccccatggtggagcttttctatggt
cgtttccttgctgtgggtgtcctggaaggtaaaaaatttgaaaacacagagatgtttgga
cagtaccccctgcaggtgaatggcttcaaggatctccatgagtgtcttgaggctgcgatg
atcgagggtgagatcgagtccctgcactcagcagagaactctgccaggtctggacaagag
cattggttcacagaactccctcctgttttgacctttgaactgtcaagatttgaattcaac
caagcactaggacgacctgagaagatccacaacaagctcgagttcccctctatgctctac
atggacaggtacatggacaggaacagggaaataaccaggatcaagagggaggagatcagg
aggctgaaagagcatctgacactgctccaacagcgactggagaggtatctgagttatggc
tcaggccccaagaggtttcctctggcagatgtcctccagtatgccatggagtttgcctcc
agtaagccagtttgcacttccccagtggaggacattgactcatcagcaccccctggtggc
acaacaggacaacagctacccccaccaaacacagccgagcaggactccttggctccttta
gagagctcaggccctgcctcaggtcccaccacagctcccactgcagcccagcaacagaga
gtacccattcataaaccctttacccagtcccggcttcctcctgacctccccatgcaccct
gccccacggcacatcactgaagaagagctgagggtgctcgagggctgcttgcatcgttgg
agaagtgaagtggaaaatgacactcgtgatctgcagggcagtataaccagaatccacaga
accattgagctaatgtactctgacaaatctatgatgcaggtgccataccggcttcatgca
gtgctggtccatgaaggccaagccaatgcaggccactactgggcttatatctacgaccca
catcagcgtagctggatgaagtacaatgatatctctgtcacaaagtcatcatgggaggag
ctggtcagggactcatttggaggctaccgtaacgccagtgcctactgtctcatgtacatc
aacgacaagaagccctttctcatagaagaggagtttgataaggaaacaggacagatactc
agtggcatggacaaactgcctccagacctgaagcagtatgtgaaggaggacaatgagctg
tttgacaaggagattgaggaatgggacaccatgcaggcccgcaaggcccaacaggagaag
ctggcactggcaacagcagccactgctgcctcagcagcatccagcacctccacttcctcc
tcttcccctcagcccatgagcattgaatccagccctccagacaacgcagtaccccagcag
gacccagagtacatggaacagccatcacccacgaatgactccaagcacttgcaggaggac
acagagagagccatctctagggctgctgctgaacaggaggagagaagcccagaagcatta
ttaaatgcttcgcttccctctcccacttcccctcagcctgaggtccagttgagcaccccc
tccacccctcctcctgacctggtcatggaggatgagtcccctggccagcgcacggtagag
gtggccattcctaatgtggggacctttgtcattgagtcagaagagggggggtatgatgat
gaggcgatgatgacccccaacatgcagggtataataatggccattggcaaatccagcagc
gtatatgaaaagaatgggcctgaggcagccttttttaaggccataaagctggaatatgct
cgtcttctgaggtttgcccaagaggacacaccacctgagaatgactaccgacttcagcac
atcattgtctacttcatccaaaaccaggcacccaagaagatcttggagaggactctgctc
acacagtttgctgacaggaacctggcctttgatgagagatgtaagagcattatgaatgtg
gcacgtgccaaactggacctaattaagcctgaggaggtcaacatggatgaatatgagatc
tggcatcaggactacaggaatttccgagagacaaccatctttatgacgactggcctggag
ctctttcagaagacaaattacgtggaggctctgatgtatctgatctattcttatcagtac
aacaaagagcttttgtcaaaggggctgtatagagggcacgatgaagagcttctcggccat
taccgtcgagagtgtttgctgaaattaaacgagcaagcagctgccatgtttgaatcagga
gaagaaccagaggtgaccacgggccttggcatcatgaatgagcttgtggtgccctgcatc
cctcttttactgatccacgacactgagagggacctgctggcagtggaggacatgaggaac
cgctggtgctcttacctgggccaagagatggaatccaacctccaggaaaagctcactgac
ttcctccctaagttactggactgctcaacggagatcaaaagcttccacgaccctcccaag
ctgccctcctactccactctggagctgtgcgaacgattcagccgcatcatggccgccctc
ggcagggtgcccaccgaggggagatga
DBGET
integrated database retrieval system
