Lates calcarifer (barramundi perch): 108893755
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Entry
108893755 CDS
T04895
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-2 isoform X1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
lcf04082
Neuroactive ligand signaling
lcf04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108893755
04082 Neuroactive ligand signaling
108893755
04519 Cadherin signaling
108893755
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108893755
Ion channels [BR:
lcf04040
]
Ligand-gated channels
GABA-A
108893755
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
PH_24
Motif
Other DBs
NCBI-GeneID:
108893755
NCBI-ProteinID:
XP_018547595
UniProt:
A0A4W6EM68
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Position
LG20:17885079..17935152
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AA seq
476 aa
AA seq
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MVMMASPNIASKCSTAMAKPSLPLKLFLWVFIVVNLPTSSFQTDDDDEVSNKTWVLTPKV
YESDVTHILNSLLDGYDNKLRPDIGVKPTVIHTDMFVNSIGPVNAINMEYTIDIFFAQTW
YDRRLKFNSTMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYT
LRLTIDAECQLKLNNFPMDEHSCPLEFSSYGYPREEIVYKWKRSSVEVGDIRSWRLYQFS
FVGLRNTSEIVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAV
PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALIEYGTLHYFVS
NRKPSAKKDKKKKNPLLRLFSSKQTPTVDIRPRSATAIQMNNATHMQERDEEYGYECLDG
KDCTSFFCCFEDCRSGAWRHGRLHIRIAKIDSYARIFFPTAFGLFNLVYWVSYLYL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgatggcttcacccaatatagcctccaaatgctcgacagcaatggcgaagcct
tccctccccctgaagctgtttctctgggtctttattgtcgttaatctccctacaagctcc
ttccagactgatgacgatgatgaggtgtctaacaagacgtgggtgctgactcccaaagtg
tacgagagtgacgtcacacacatcctaaatagcctactagatggatatgacaacaaactc
agacctgacatcggagtcaaaccaacagtgatccacacagacatgtttgtcaatagcatc
ggcccagtaaatgccatcaacatggaatacaccatcgacatcttttttgcccagacctgg
tatgacagaaggttaaaattcaacagcacaatgaaggttctgcgtctcaacagcaacatg
gttgggaagatctggatcccagacacttttttccgcaactccaagaaggctgatgctcac
tggatcaccactcccaatcgaatgcttcgaatctggaatgatggccgaatactctacacc
ctcaggttgaccatcgatgctgagtgccagcttaaactgaacaacttcccaatggatgag
cactcatgtcccctggagttttcaagctatggctaccccagggaggagattgtgtacaag
tggaaaaggagctcagtggaggttggggacattcgctcctggaggctctaccagttctcc
tttgtgggcctgaggaacacctctgagattgtcaggactgtctcaggagactatgtggtg
ctgaccgtcttctttgacctgagcaggagaatgggctacttcaccatccagacctacatc
ccatgcaccctgattgttgtcctctcctgggtctcattctggatcaacaaggatgcagta
cctgccaggacatcattaggcatcaccactgtgctgaccatgaccacgctgagtactatt
gccaggaaatccctcccaaaagtgtcctatgtgaccgccatggacctgttcgtgtctgtc
tgcttcatcttcgtctttgccgcacttatagagtacggcacactgcactactttgtcagc
aacaggaagccaagtgccaaaaaggacaagaagaagaaaaacccgctcctccggctcttt
tcctcaaagcagacacccacggtagacatccgtccacgctcagccacagccattcaaatg
aacaacgccacacacatgcaggagcgagacgaggagtacggctacgagtgtctggacggg
aaggactgcaccagcttcttctgctgtttcgaagactgccgttccggagcctggcggcac
ggcaggttgcacatccgcattgccaagatagactcgtacgcacgcatcttcttccccact
gcattcggtctcttcaacctggtctactgggtctcctatctctatctctag
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