Lates calcarifer (barramundi perch): 108893763
Help
Entry
108893763 CDS
T04895
Name
(RefSeq) calpain-5
KO
K08574
calpain-5 [EC:3.4.22.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108893763
Peptidases and inhibitors [BR:
lcf01002
]
Cysteine peptidases
Family C2: calpain family
108893763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
C2
Motif
Other DBs
NCBI-GeneID:
108893763
NCBI-ProteinID:
XP_018547605
UniProt:
A0AAJ7Q5T0
LinkDB
All DBs
Position
LG20:13063739..13073744
Genome browser
AA seq
643 aa
AA seq
DB search
MFSSAVPYKNQHYAELKKNCINDKTLFEDPEFPATNASIYFRKPPAGFVEWKRPGEISDD
PHLFVEGISSHDLNQGVVGNCWFVAACSCLALKPHLWKKVIPDWKEQEWDPKHPENYAGI
FHFQFWVFGEWVDVVVDDRLPTINGELIYCHSKTNNEFWSALLEKAYAKLSGCYESLEGG
NTGDAVVDFSGAVAEAINLEAEAYYKDQKKQDQLFEDLLKVYDRGGIISCSIKAQPHEIE
AKMANGLVKGHAYSVTAVKKVRLGHGLLAYFKNETIPLIRMRNPWGKIEWKGAWSDSSEE
WSQVGDMERGNLGITVEDDGEFWMSFTDWCKYFTDADVCRLINTSLISIHKTWNEVVHFG
SWTKNAEPLLNRCGGCANHKQTFLQNPQYLFDVTKEEDEVLVSLQQRDMKIHRRIGQGEN
LTIGFSLFKVELNRKYRMHDILTQPCVATSTYINARTVFLRSMLPKSRYVIIPTTFKPLT
LGDYMIRVFTDVDSGCRELVEDKPKVRCWSSFLGYPQAVTHVYVHGAEGLQNQDSTGGAD
PYVIISCEGKSVQSTIKKDTLQPEFATSGIFYRKKPRKPLTVEVWNSNAVKDEFMGQVVL
SGSVKDTTEPQKLQLRKQGRQMADEMPGYISLRIITSTQLTAM
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgttctcctccgctgtcccatacaaaaaccagcactacgctgaactgaagaagaactgc
atcaacgacaaaacgctgtttgaggatccagaatttccagccaccaatgcatcaatatat
tttaggaaaccacctgctggttttgtggagtggaagcgaccaggggagatcagcgatgat
ccccatctgtttgtggaaggcatcagctcccatgacctgaaccagggagttgtggggaac
tgctggttcgttgctgcctgctcctgtctggctttgaagccacacctctggaagaaggta
attcctgactggaaggagcaggaatgggatcccaagcacccagaaaactatgcaggaatc
ttccacttccagttctgggtgtttggagaatgggtggatgtggtggtggacgaccggctg
cctacgatcaacggagaactcatctactgtcactcaaaaaccaacaatgaattctggagc
gctctactggagaaggcttatgccaagctctctggctgctatgagtcacttgagggggga
aacacaggagatgctgtggtggatttcagtggagcggtggccgaagccatcaacctggag
gcagaggcctactacaaagaccagaaaaaacaagaccagctgtttgaggatctactgaag
gtctacgaccgtggaggaatcataagctgctccattaaggcacagcctcatgaaattgag
gccaagatggcaaatgggctagtgaaaggccatgcatattcagttactgcggtgaagaag
gtgcgcctgggtcatgggctgctggcctacttcaagaacgaaaccatccctctgatccgc
atgaggaacccctggggcaagattgagtggaaaggagcctggagtgatagctctgaggaa
tggtcacaggttggtgatatggagaggggaaaccttggcatcacagtggaggatgatgga
gagttctggatgtcatttacagactggtgcaagtacttcacagatgcagatgtttgccgt
ctcatcaatacttccctgatcagtatccataagacatggaacgaggttgtgcactttggg
agctggaccaaaaacgcagagccgctgttaaaccgctgcggcggctgtgctaaccacaag
cagacattcctgcagaacccacagtatttgtttgatgttaccaaggaggaggatgaagtt
ctagtctctttgcaacaaagagacatgaagatccacagaagaattggtcaaggagaaaat
ctgaccatcgggttcagtctctttaaggtggaactgaacaggaagtatcgaatgcatgac
atcctgacacaaccatgcgtggcgacgtccacctacatcaacgctcggacagtgtttttg
agaagcatgctgccaaagagccgctacgtcatcatccccaccaccttcaagcctctcaca
ctgggggattacatgattcgagtttttactgatgtggactcagggtgcagggagctggta
gaggataagccaaaagtacgatgctggagttcatttctgggatacccacaggctgtgact
cacgtctacgtccacggagcagaggggctgcagaaccaggacagcaccggaggtgcagac
ccctacgtgatcatatcctgtgagggtaaatcagtgcagtccaccatcaagaaggacacc
ctgcaaccagaatttgcaaccagtggcatcttctacaggaagaagcccagaaagccccta
actgtggaggtgtggaacagcaacgcggtgaaggacgagtttatgggccaagtggtgctg
tctgggtcggtgaaggacaccaccgaacctcaaaagcttcagctgaggaagcaaggtcgg
cagatggccgacgagatgcccggttacatcagcctgaggatcatcacttcgactcagctg
accgccatgtga
DBGET
integrated database retrieval system