Lates calcarifer (barramundi perch): 108893774
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Entry
108893774 CDS
T04895
Symbol
stag2a
Name
(RefSeq) cohesin subunit SA-2a
KO
K06671
cohesin complex subunit SA-1/2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108893774 (stag2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108893774 (stag2a)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
108893774 (stag2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STAG
SCD
DUF3835
Motif
Other DBs
NCBI-GeneID:
108893774
NCBI-ProteinID:
XP_018547628
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All DBs
Position
LG20:11750455..11767391
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AA seq
1274 aa
AA seq
DB search
MIAAQDLHTEFQFPQEAESQLSSDTDLEDPDGKNAKARKGMAAKKGRKVLGDKAKGGGGG
RVPGLGWVNGHHQENGMENMTLFEVVKMGKSATQSVVDDWIEAYKHDRDVALLDLINFFI
QCSGCKGAVSGEMFRHMQNSEIIRKMTEEFDEDSGDYPLTLSGPQWKKFRISFCDFIAVL
VRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMD
NTQRQYEAERNKVIAKRANDRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDAIA
EIRAICIEEIGVWMKLYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNRELSP
RLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSDEVLTAEDCESVYHLVYSAHR
PIAVSAGEFLFKKLFSHRGPEEEGLPRRGRQSLNGSLIKTTVFFFLESELHEHGAYLVDS
LWECASELLKDWESMISLLLDEPMPGEEALTDRQETALVEIMLCAVRQACECHPPVGRGT
GKRVLTAKEKKTQLDDRTRITEMFAVALPLLLAKYCVDIDKVTNLLQIPKYFDLDIYTTG
RLEKHLDALLRQIWEVVDKHTDTEVLEACSTTYHYLCNEEFTIFNRVDIARSQLLDELVD
KFNRLLEDFLQEGEEPDDDDAYQVLSTLKKISAFHNAHDLSKWDLFTSNYRLLNTGLQNG
DMPEQIVIHAMQCTHYIIMWHLAKVSDGGSLKGDMVTLRKQMRAFSLMCQRYLNSINTAV
KEQAFTILCDLLLIFSHQIMSSGREQLEPLVYTPDASLQAELLNFILDQVFIDQDDDNNS
TDGQPDDEASKIEALHKRRNLLAAYCKLIIYNVVEINTGADIFKQYMRYYNDYGDIIKET
MSKTRQIDKIQCAKTLILSLQKLFNEMLSELGFNFDRSSSAFCGIKELARRFSLTFGLDQ
LKTREAIAMLHKDGIEFAFKEPSPQGEGSPPLNLAFLDILSEFSSKLIRQDKRTVHMYLE
RFMTFQMALQREDCWLPLISYRNSLQTGGDDDTMSVISGISSRGSTIRSKKSKPAAASKR
KLPEEENSCSSSDAVWMNREQNVQTPVMIHSPHLTSTVLRDPKKMRPEDSFTAAYTMPAE
QHQPVPTQQQPHHHHQASIDYNTQVTWMLTQRQQAEARQQQERVSMHYAKMRNHMQQAIR
RGSGLMEDDEEPIVEDVMMSSEDRLEDINEGMDFDTMDIDLPASKNRRERTELKPDYFDP
SSIMDDSVLNVSMY
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagcgcaggatttgcacacagagtttcagtttcctcaagaggcagaatctcag
ttgtcttcagatactgatcttgaggatcctgatggcaaaaatgcgaaggctagaaagggc
atggcagccaagaaagggaggaaggtgcttggagacaaggccaaaggtgggggagggggg
agggtccctggtctcggctgggtgaatggccatcaccaagagaatgggatggagaacatg
accctgttcgaagtggttaaaatgggcaagagtgccacacagtcggttgttgatgactgg
attgaggcgtacaaacacgacagggacgttgctctcttggacttaatcaacttcttcatt
cagtgctctgggtgtaaaggcgctgtgagtggagagatgttcagacacatgcagaactcc
gagatcattcgaaaaatgacagaggagtttgatgaggacagcggtgactatccattaact
ctgtcagggcctcagtggaagaaattcaggataagtttctgtgacttcatcgctgttctg
gtgcgtcagtgtcagtacagcatcatctacgatgagtatatgatggacactgtcatctcg
ctgctcaccggcctgtctgactcacaggtcagggcatttagacacacaagcacactcgca
gccatgaagttgatgacagccctggtgaacgtcgctctgaacttgagcatcaacatggac
aacacacagagacagtatgaggcggagaggaacaaggtcattgcaaaaagggccaatgat
aggttggagctcctgttacagaagcgtaaagagcttcaagaaaatcaagatgagattgaa
aacatgatgaatgcaattttcaaaggagtgtttgttcacagatatcgtgatgccatcgct
gagatccgagcgatctgtattgaggaaattggggtgtggatgaagctgtacagcgatgcc
ttcctcaatgatagttacctgaagtatgttggctggacaatgcacgacaagcaaggtgag
gtgcgacttaagtgcctgactgccctgcaaggcctctactacaacagagagctcagtcct
cgactagagctcttcacaagtcgcttcaaggaccgcattgtgtctatgactctggataag
gaatatgatgtcgcagtgcaagccattaaacttctgacacttgtcttacagagtagtgat
gaggttctgacagcagaggattgcgagagtgtttatcacctggtttactcagcacatcga
cccatcgctgtttcagcaggagaatttctcttcaagaagctcttcagtcatcgaggtcca
gaggaggaggggttacccaggaggggcaggcagagcctcaatggcagcctcatcaagact
actgtcttcttcttcctggagagtgagctccatgaacacggggcctacctggtggatagc
ttgtgggagtgtgcgtcggagctgctgaaggactgggaatctatgattagcctgctgctg
gatgagcccatgccaggggaagaggctctgactgatcgccaggagacggctctggttgag
atcatgctctgtgccgttcggcaggcttgtgaatgccaccctccagtaggcagaggcaca
ggaaagagggtcctgactgcaaaggagaagaaaacacagctggatgatcggacacggatc
acggagatgtttgccgttgcgttgcctttgttactggcaaagtactgcgttgatattgat
aaggtgaccaatttgctacaaataccaaagtactttgatcttgacatctacacaacaggc
cggctagagaagcatttggacgccttgttgcggcaaatctgggaagtggtggataagcac
acagacactgaggtcctggaggcctgctctaccacctaccactatctctgcaacgaagag
ttcaccatcttcaaccgagtggacatcgcccgctcccagcttctcgacgagctcgtagac
aagttcaataggctcctggaggacttcctgcaagagggtgaagaaccagatgatgatgat
gcctaccaggttttatctacactcaagaagatcagcgctttccacaatgcacatgacctc
tccaagtgggatctcttcaccagcaactacaggctactcaacacaggtctgcagaatgga
gacatgcctgagcagattgtgattcatgcaatgcagtgcacacattacatcatcatgtgg
catctagcgaaggtttcagatggcggttcattaaagggcgatatggtgaccttgagaaag
caaatgagagccttttccttaatgtgtcagcgttacctaaacagcatcaacactgcagtc
aaagagcaggccttcaccatactatgtgatctgctattgatcttcagccaccaaattatg
tcttcaggccgggaacaactggagcctctggtctatacgccagacgcttctttgcaggcg
gagctgctcaacttcatcctggatcaagtgttcattgatcaggatgatgacaacaacagc
acagatggacagccagatgatgaagccagtaaaattgaagctctgcacaagcgaagaaac
cttctagctgcctactgcaaactaatcatttacaatgttgtggaaataaacactggagca
gatatatttaaacagtatatgaggtattacaacgactacggagatatcatcaaggagact
atgagtaaaacgagacaaattgacaaaatccaatgcgcaaagacactcatattgagcctg
caaaagttattcaacgagatgctgtctgaacttggcttcaatttcgaccgctcatcgtca
gccttctgcggcattaaagagcttgccagacgcttctcgttaacttttggcttggatcag
ctgaagaccagggaggctattgccatgcttcacaaggatggaattgaattcgccttcaaa
gaacccagtccccaaggagaggggagtccaccccttaatctagcatttttggatattctg
agtgagttctcaagcaagctaattcgacaggacaagagaacagttcacatgtacctggag
cgattcatgacgtttcagatggctctgcagagagaggactgctggctgcccctcatctcc
tacaggaactccctgcagactggaggggatgatgataccatgtctgtcatcagtgggatc
agcagtcgggggtccaccatcagaagtaagaagtccaagccagctgcagctagcaaaaga
aaactgcctgaagaagagaacagctgcagcagtagtgatgctgtctggatgaaccgtgag
cagaacgtgcagacgccagtgatgatacactcaccccaccttacctccactgtactgagg
gatccaaagaagatgaggccagaggacagcttcacggctgcatacaccatgccagcagag
cagcatcagcctgtgcctacccagcagcagccacaccatcatcaccaggcatccattgat
tacaatacccaggttacttggatgttgacacagaggcaacaagctgaggcccgtcagcag
caagagcgggttagcatgcactatgccaagatgaggaaccacatgcagcaagcaattcgt
cgaggctctggactcatggaggatgatgaggagccaatagtggaggatgtgatgatgtca
tcggaggaccgcctggaggacatcaatgagggcatggattttgacacaatggacatcgat
ttgccggcatcaaagaatcgcagagaaagaactgaactgaagccggactactttgatcca
tcttccatcatggatgattcggttctcaatgtctcaatgtactga
DBGET
integrated database retrieval system