Lates calcarifer (barramundi perch): 108893776
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Entry
108893776 CDS
T04895
Name
(RefSeq) steroid hormone receptor ERR1
KO
K08552
estrogen-related receptor alpha
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108893776
03029 Mitochondrial biogenesis [BR:
lcf03029
]
108893776
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lcf03310
]
108893776
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
108893776
Mitochondrial biogenesis [BR:
lcf03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
108893776
Nuclear receptors [BR:
lcf03310
]
3. Estrogen like
3B. Estrogen-related receptor
108893776
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
108893776
NCBI-ProteinID:
XP_018547631
UniProt:
A0A4W6EYU3
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Position
LG20:complement(9432042..9448205)
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AA seq
433 aa
AA seq
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MSSRERRSDVYIKAEPSSPEGGGGGRTSPGGASSDSSQSGGGGTRGDSTKRYSPPLYTPA
LRCHFKDEGGDGAEEGSTGNGAGRCKYALSTLPKRLCLVCGDVASGYHYGVASCEACKAF
FKRTIQGNIEYSCPASNECEITKRRRKACQACRFTKCLKVGMLKEGVRLDRVRGGRQKYK
RRPEVENATYQNAPLPLTKESEKGSSNIIVSHLLVAEPEKLFAMPDPLQPDTAQRTLTTL
CDLADRELVVIIGWAKHIPGFLSLSLADQMSVLQSVWLEVLVLGVAYRSLGCEDEVVFAE
DFVLDEEMSRVAGLTELNAAISQLARRFRALNVDREEFVMLKAIALTNSDSVYIEDMEAV
QKLRDLLHQALLELECQRRPDDPQRAGRLLLTLPLLRQTAGRALTTFYSIKTRGGVPMHK
LFLEMLEAMMDSP
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccagggagcgtcggtcagatgtctacataaaggcggaacccagtagtccagag
ggaggtgggggaggtcggaccagtcctggtggggcctcctcagactcctctcaaagtgga
ggtggaggaaccagaggagacagcacaaaacgttactccccaccactctacacaccagct
ctgcgttgccacttcaaagacgaaggtggtgatggggcagaggagggctccactggaaat
ggagctgggcgatgcaagtacgccctgagcacgctgcccaagaggctctgtttagtatgt
ggagatgtggcttcaggttaccactatggcgtggcgtcatgtgaggcctgcaaagcattc
ttcaagagaaccattcaaggtaacattgaatacagctgtccagcttcaaatgagtgtgag
atcaccaaaaggcgcagaaaggcttgccaggcatgccgcttcactaagtgcctcaaagta
ggcatgctgaaagagggagttcgtctcgacagggttcgaggtggaagacagaagtacaaa
aggcgtccagaagtggagaatgcaacataccagaatgcccctctaccactgacaaaggag
agtgaaaaaggttcctccaacatcattgtgtcccacctcctagtggcagagccagaaaag
ttatttgccatgcccgaccctctgcagcccgacacagcccagcggacgctcaccaccctt
tgtgaccttgctgaccgagagctggttgtcatcattggctgggccaaacacattccaggc
tttctgtcactgtccctagcagaccagatgtctgtgctgcagtcagtatggctggaggtg
ctggtgctgggtgtagcgtaccgctcgcttggctgcgaggacgaggtcgtgtttgcagag
gattttgtccttgatgaggagatgtcacgtgttgcaggactgacagagctaaatgcagca
attagtcaacttgctcgccgcttccgtgcacttaatgtcgaccgggaggaatttgtcatg
ctaaaagccatcgcactcactaactcagactctgtttacatcgaggacatggaagctgtg
cagaagctgcgggacctcctccaccaggccctgctggagctggagtgtcagcggcgccct
gatgacccccagcgagctggacgcctccttttaacgttgcctctcctccgacagactgct
ggtcgtgctcttaccaccttctacagcatcaagacccgtggaggtgtacccatgcacaaa
ctattcctggagatgctggaagccatgatggactctccctag
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