Lates calcarifer (barramundi perch): 108893783
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Entry
108893783 CDS
T04895
Name
(RefSeq) PDZ and LIM domain protein 4
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108893783
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108893783
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
108893783
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
108893783
NCBI-ProteinID:
XP_018547645
UniProt:
A0A4W6E8V2
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Position
LG20:complement(17217023..17262106)
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AA seq
368 aa
AA seq
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MPNMPQTVTLKGPSPWGFRLVGGRDFSTPLTISRVTPGSKAAQGDLCPGDTILAINGDST
EHMTHMEAQNRIKTCTQQLTLSISRSGSGDRVWSPTVSEDGKTSPYTEPDSQNFRPITSG
YGGYSRKPSYTPEPQSPQPAQPAQPAHLNNGHSRPNNGHSYGYGNGTGHAQYNNPAGLYG
GSNGDRSLPSKMGGLSISATHSPEPPIHSPVGRNGFDTQSDVYKMLQDYEEPVSEPKQSG
SFKYLQGILEAEDGGVSPTERMRNLKSPVRSPIPKLGSPIPSPMSGLQKLPQCTRCCNGI
VGTIVKARDKLYHPECFMCDDCGVNLKQRGYFFIEDNLYCETHAKARVQPPEGYDVVAVY
PNSKVELV
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgccaaacatgccccagaccgtgacactaaagggaccctctccttggggttttcgactg
gtgggaggacgggatttcagcacaccgctaaccatctccagggtaacaccaggcagtaag
gcagcccaaggtgacctttgtccaggtgacaccatcctggctatcaatggcgacagcacg
gagcacatgacacacatggaggctcagaacaggattaaaacctgcactcagcagctcaca
ctcagcatcagcaggtcgggatcaggagacagagtgtggtcgccaactgttagcgaagac
ggcaagacaagcccttacacggagcctgactcacagaatttccgtcccatcaccagcgga
tatggcggttacagccgtaaaccttcctacacccccgagccccagtctccacagcccgcc
cagcctgcccagcccgctcacctgaataacggacactccagacccaacaacggtcatagc
tacggatacggaaacggaaccgggcacgctcagtacaacaatccggcgggactttacggc
ggcagcaacggagacaggtctctgccgagcaagatggggggcctcagcatcagtgccaca
cacagcccagagcctcccatacactcccctgtgggtcgtaatggtttcgacacgcagtca
gacgtctataagatgctgcaggactacgaggagcctgtctctgaacccaagcagtctggc
tccttcaaatatctccagggaatcctggaggctgaggatggaggtgtgtcaccaacagag
aggatgagaaacttaaagtctccagtcagatctccaatccccaaactgggaagccccatc
cccagccccatgtctggtcttcagaagctaccccagtgcacacgctgctgtaatggcatt
gttggcaccatcgtgaaggccagggacaagctctaccaccccgagtgcttcatgtgcgac
gactgcggcgtcaacctcaagcagagaggctactttttcatcgaggacaatctgtactgt
gagacccacgccaaggcacgcgtccagcccccggagggctacgacgtcgtcgcggtgtac
cccaactccaaggtggagctggtctga
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