Lates calcarifer (barramundi perch): 108893800
Help
Entry
108893800 CDS
T04895
Symbol
slc47a1
Name
(RefSeq) multidrug and toxin extrusion protein 1
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108893800 (slc47a1)
Transporters [BR:
lcf02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
108893800 (slc47a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
108893800
NCBI-ProteinID:
XP_018547678
UniProt:
A0A4W6DAC0
LinkDB
All DBs
Position
LG20:14471181..14483730
Genome browser
AA seq
641 aa
AA seq
DB search
MEKLGSPEPAQPSQGAEPVAGVSVAKTAEAEGDEAVAAVSSKLFRCACVRRWLPLDYREE
LYHVLRLTGPLLLSRILNFLLPFVITIFCGHIGNAELAGYALASATINVTTTATGFGLAM
ACDTLISQTFGSKNMKRVGVILQRSSLILLLFCLPCWALLINSQNILLILYQEDEVARIA
QLYVMAFLPAVPAMFLHQLQVAYLQNQGIILPQMYTAAAANIFNLGINYVLIFSLKLGVI
GSAIANSLSQITICLLLFGYIRWRKLHQNTWEGWSTACLQDWGSYMKLAVPSVFMVWFEW
WIWEVGGFLAGVLGEVDLAAQHVLVEIGTIIYMFPLGIHAAACVRVGNALGAGDTSRAIV
TCKVTLVLSGMLAVLQGIVIAGCKSVVGYIFTSDDNIVEIVSENLTVCTFLQFFDALLCV
CSGILVGSGMQKIAALSNLVSYYFIGLPVGIALMFAAQLRILGLWLGLFICVFIQTCFFL
LVIFKLNWKKVTHKAQLRAGNKVVVIPKRPASMALSEVMMPDISDRPNTAQLDSEEQSKA
NGYSPVNTQDQELKVGHSADGNNANAGGTDGDTKQLSVTQLILRRGLTLLVSVLILAIGV
AFHIAFPVPEPSAQSRANFTLNWANASTPTPLAPLDLTPNP
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggagaagctgggttccccggaacctgcgcagccctcgcagggtgcagagcccgttgcc
ggggtttctgttgctaagacggcagaggccgagggagacgaggctgtggcagcggtcagc
tccaaactgtttcggtgtgcgtgcgtgagacgttggctaccactggactacagagaggaa
ctctaccatgtcttacggctcacgggcccactgctgctgtcccggattctgaacttcctc
ctgccgtttgttatcaccatattctgcggtcacatcggcaatgcagaactggctggatac
gcactggcctcagcgaccattaacgtgaccacaacagcgacaggctttggccttgctatg
gcttgtgacacactgatttctcagacgttcggcagcaagaacatgaaacgcgtgggagta
attctccagaggagttcactgatcctgctgctgttttgtctgccctgttgggcccttctc
atcaactcgcaaaacatactactcatcctgtaccaagaggatgaggtggcgagaattgcc
caactctacgtgatggcctttctaccagctgttccagccatgttcctgcaccagctgcag
gttgcctacctacaaaaccaggggattattctgccccagatgtacacagcagctgcagca
aacatttttaacttggggatcaactatgtcttaatcttcagcctcaagttgggtgtcatc
ggatcagcaatcgccaacagcctctctcagatcaccatctgcctgctgttgtttggctac
atcagatggaggaagctccatcagaacacgtgggagggctggtccaccgcctgtttgcag
gactggggctcctacatgaaactggctgttcccagtgtattcatggtctggtttgagtgg
tggatctgggaggttggcggtttccttgctggtgtacttggcgaggtggatcttgctgcc
cagcatgtgctggtggaaataggaaccattatatatatgttcccgctaggaatccacgca
gctgcctgtgtgcgtgttggcaatgctctgggagctggggacacttccagggccatagtc
acctgcaaagtgaccctggttctctcaggaatgcttgctgtgctccagggtatcgtcatt
gctggctgtaagtccgtcgttggctacatatttacctctgatgacaacattgtggagatt
gtctcagagaaccttacagtctgcacatttctgcagttctttgatgcacttctgtgtgtc
tgctcagggattcttgttggatctgggatgcagaaaattgccgccttgtccaacctggta
tcttactacttcatcggtctgccggtgggaatagctctgatgtttgctgcccagctcaga
atattaggcttgtggctgggtctttttatctgtgtattcattcagacgtgtttctttctt
cttgttatcttcaaactcaactggaagaaagtcacacacaaggctcaactgcgagctgga
aataaagtggtagtgatacccaaacgtcctgcaagtatggcactgagtgaagtgatgatg
cctgacatctctgaccgccctaacacagcccagttggacagtgaagaacagtctaaagca
aatggctacagtccagtcaacactcaggatcaggagctgaaagtgggtcactcagctgac
ggcaataacgcaaatgcaggaggtacagatggagacactaagcagctttctgtcactcag
ctgattttacgtcggggactcaccctcttggtttcagttctcattttggccataggtgtt
gctttccacattgccttccctgtgccggagccctctgctcagagcagggccaactttact
ctgaactgggccaatgcctccactcccacaccactggctcctctggacctgaccccaaac
ccctaa
DBGET
integrated database retrieval system
