Lates calcarifer (barramundi perch): 108893822
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Entry
108893822 CDS
T04895
Name
(RefSeq) plastin-3
KO
K17336
plastin-3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108893822
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108893822
04147 Exosome [BR:
lcf04147
]
108893822
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
Check point factors
Other check point factors
108893822
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
108893822
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108893822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CH
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
CAMSAP_CH
EF-hand_FSTL1
Motif
Other DBs
NCBI-GeneID:
108893822
NCBI-ProteinID:
XP_018547729
UniProt:
A0AAJ7Q675
LinkDB
All DBs
Position
LG20:complement(11436796..11452140)
Genome browser
AA seq
622 aa
AA seq
DB search
MSGKITKEEMEEMREIFGKIDLDNDEYICDYELHELLKEAGHQLPGYMVREIIQKLDRNK
DNKISFEEFLAIVQELRGSEIAKTFRKVINRKEGILAIGGTSELSSEGTQHSFSEEERYA
FVNWINTALEKDPDCQHVLPMDPNTDSLFTSVGDGIVLCKMINLSVPDTIDERTINKKKL
TPFTIQENLNLALNSASAIGCHVVNIGALDLKEGKPHLVLGLLWQIIKIGLFADIELSRN
EALAALLRDGETLEDLMKLSPEELLLRWANFHLENAGWQKINNFSSDIKDSRAYFHLLNQ
ISPKGTDENQPRIDINMAGFSEKDDMKRAEAMLQQADRLGCRQFVTPADVVSGNPKLNLA
FVANLFNKYPALTKPENEDIDWGLLEGETREERTFRNWMNSLGVNPTVNHLYGDLQDAMV
ILQLYEKIKVPVDWNNKVNKPPYPKLGTNMKKLENCNYAVELGKTAKFSLVGIGGQDLND
GNATLTLALVWQLMRRYTLNVLEELGDGEKVNDDIIVKWVNKTLAEAGKSTKISSFKDKE
ISSSLAVLELIDAIQPGSINYELVKTGSLSEDDKLENAKYAISMARKIGARVYALPEDLV
EVKPKMVMTVFACLMGRGMKRA
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaaagataacgaaagaggagatggaggagatgagggagatctttgggaaaatt
gatctggacaatgatgaatatatctgtgattatgaactccatgagctccttaaagaggcc
ggccaccagctacctggatacatggttcgagagatcatccagaaactcgatcgcaacaag
gataacaagatcagctttgaagagtttttggcgatcgtccaggagctcaggggcagtgaa
atagcaaaaactttccgcaaggtcatcaacagaaaagaaggcatcctggctattggaggg
acgtctgagctgtcgagtgaaggcacacaacactcattctctgaggaggagcgatatgcc
tttgtgaactggatcaacactgctctggaaaaagatcctgactgccaacatgtcctgccc
atggatcccaatacagactcgctcttcacgtctgtcggagatggtatagtactctgcaaa
atgatcaacctgtcagtgccagacaccatcgatgagagaaccataaataagaagaagctg
acgccatttacaatacaggagaatctgaacctggccctgaactcagcctctgccatcggc
tgccatgtggtgaacattggtgctctagacctgaaagaggggaagccccatctggtgctg
ggcctgctgtggcagatcatcaagatcggtctgtttgctgacatcgagctcagcagaaat
gaagcactggcagcattgctgagagatggggaaacactagaggacctgatgaagctgtct
ccagaggaactgctgttacgctgggcaaactttcacctggaaaatgctggctggcagaag
atcaacaacttcagctctgacatcaaggactcaagggcctatttccacctcctgaatcag
atctctccaaaaggcacagatgaaaaccagcctcgcattgacatcaacatggcgggcttc
agtgagaaggacgacatgaagagggcggaggccatgctgcagcaggctgacaggctcggc
tgtcgacagtttgtcaccccagctgatgtcgtcagtggaaaccccaaactcaaccttgcc
tttgtggccaatctgttcaacaaatatccagcgctgaccaaacctgagaatgaggacatt
gactggggactgttggaaggtgaaacaagagaagagaggacgttccgaaactggatgaac
tccctgggagtgaacccaactgtcaatcatctgtacggagacctacaggatgccatggtc
atccttcaactctatgagaagattaaagtgcctgttgactggaacaacaaggtcaacaag
ccaccttaccccaagctgggaaccaacatgaaaaagttggagaattgtaactacgcagta
gaactgggcaaaacagccaagttctcccttgttggcatcggcgggcaggacctgaacgat
ggcaacgctaccctgactctggcactggtgtggcagctgatgagaagatatacgttgaat
gtactggaggaactgggagacggagagaaagtaaatgatgacatcattgtaaagtgggtc
aacaaaacgttggcagaagctggaaaatcaactaagatttcaagctttaaggacaaggag
atcagcagcagtttggcagtattggaactgatagacgccatccagcccggcagcatcaac
tacgagctggtaaaaaccggcagcctctctgaagacgacaagctggagaacgccaaatat
gccatctctatggcaagaaagatcggagcccgagtctacgctctcccagaagaccttgtg
gaggtcaaacccaaaatggtgatgacagtctttgcctgcttgatgggtcgggggatgaag
cgggcctaa
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