Lates calcarifer (barramundi perch): 108893841
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Entry
108893841 CDS
T04895
Symbol
zgc:165604
Name
(RefSeq) immunoglobulin superfamily member 11
KO
K06791
immunoglobulin superfamily, member 11
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
108893841 (zgc:165604)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108893841 (zgc:165604)
Cell adhesion molecules [BR:
lcf04515
]
Immunoglobulin superfamily
CTX family
108893841 (zgc:165604)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
ig
Ig_2
V-set
I-set
Ig_VEGFR-1-like_5th
C2-set_2
C2-set_3
DUF2254
Motif
Other DBs
NCBI-GeneID:
108893841
NCBI-ProteinID:
XP_018547762
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All DBs
Position
LG20:complement(14174583..14180778)
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AA seq
325 aa
AA seq
DB search
MPSFFGHHQLCTQGGEKAASLCFLSAMGSSGRWMLWTLCACFTAPENVALRVTMSKASVE
VVQGDFVILPCSFFTSSPLSRLNVIWTLAPFSSPETPIQVIVYDHGQVIEDPSLTGRVGF
TGIPWSADIVLNDTRVTDAGIYRCMVNNPPEAADPGIGELVLSVLVPPSLPVCQWDGDID
MGGSVTLSCSVAQGVPTPEIRWDKLNPEEISLPVNMEGDLSGSVQIVNVSSQTSGLYRCS
ASNVLGTENCYVNLSIYSTPDSSSGILQGVLLTLSMSLVLLALLVLVLWLHRTGQDGRWR
EGKEEEEECYNEIRYTPSLMKRSFV
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcctagtttttttggccaccaccagctctgtactcaggggggagagaaggctgcctct
ctatgtttcctctcagctatgggctcttctggaagatggatgctctggaccctgtgtgca
tgtttcaccgccccggagaatgttgcactcagggtgaccatgagcaaagccagtgtggag
gtggttcagggggattttgtcatcctgccctgctccttcttcacctccagccccctctcc
agactcaacgttatctggactctggctcccttctccagcccagaaaccccgatacaggtg
attgtgtacgaccatggacaggtgattgaagacccctccctcactggcagggtgggtttt
acaggtattccttggagtgcggatattgtcctgaatgacacacgagtaacagatgctggt
atttaccgctgcatggtcaataacccaccagaggcggcagatcctggcataggagagctg
gtgctcagtgtcctggtgccaccttcgctgcctgtgtgccagtgggatggagatattgac
atgggaggaagtgttacactgtcctgctcggtggcacagggcgtccccactccagagatc
cgctgggataaactcaatccagaggaaatctcacttcccgtgaacatggagggggatctg
tcaggctccgtccaaattgtcaacgtgtcttctcagacgtccggcctctaccgctgctct
gcgtctaatgtcctgggaacagagaactgctacgtcaatctgtccatctacagcacccca
gacagttcctcgggcatcctgcagggggtgctgctgactttgtccatgagcctggtgctg
ctggctttgctggtgcttgtgctgtggctccatcgcactgggcaggatgggaggtggagg
gaagggaaagaagaggaggaggaatgttataatgagatacgatacactccgtctctgatg
aagcgctcgtttgtttga
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