KEGG   Lates calcarifer (barramundi perch): 108893846
Entry
108893846         CDS       T04895                                 
Name
(RefSeq) probable ribonuclease ZC3H12B
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcf03019]
    108893846
Messenger RNA biogenesis [BR:lcf03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     108893846
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 zf-CCCH_4 UBA_N4BP1_C
Other DBs
NCBI-GeneID: 108893846
NCBI-ProteinID: XP_018547770
UniProt: A0A4W6FC90
LinkDB
Position
LG20:11190322..11205254
AA seq 847 aa
MTAWSMVEKLKMEKRPCREENIDSSEAQHATDESEDGSSSESESEEQQRQRVQVNSSSSG
KKREPLAVTKPHRQLCRSPCLDRPSFSQSSTVQDFREDETSAGPGIKPASDREYQTKMDF
ALKLGYSGEQVETVLNKLGAAALINDVLAELVRLGNKVEPESQPCSSTATLISRSPCVKE
TVSPEVSVEDESVDTFDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVEWFREKGHKDIT
VFVPAWRKEQSRPDALITDQEILRKLEKDKILVFTPSRRVQGRRVVCYDDRFIVKLAYDS
DGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRP
VVPEHKKQPCPYGKKCTYGHKCKYYHPERVNQPQRSVADELRAFAKLSAVKTMSEGALAK
CGTGPATAKGDSNSEAKRVAPKRQSDPSIRSVACEPPEALSVIRKSETNSVPSLVSALSV
PTMQPAKSHAAGALNTRSASSPVPGSLQFAHSSLEHMSSVQYPPILVTNSHGASVTYSEQ
FPKYDSVSDHGYYSLHSDFSNMSMSSMHNVDSFCSMEHEHGVYQRNPSHCPESCLSHSNS
DSFSSYGDLYPSSVDSSLEESMKGQQQSPAQGRMQAFSHGFRHEALTRVQSYGPEEPKQG
PRKQSGSHLAPHIQHATVGARSSCPGDYPLTQNVLPPLSSQPTRSLGMTRMDSISDSRLY
DSNPMRQRRPPLCREQHASWDPLPCGNESYGYHSYPLSNSLMPCCERVMVRSMPDKMEQI
WSSPWETPSAAEHQERYVIPDHQYQTYRNLCNIFPAYIVHSVMEKNPHLTDPQQLAAVIV
TKLRSSH
NT seq 2544 nt   +upstreamnt  +downstreamnt
atgacagcatggtccatggtggagaaactcaaaatggaaaaacgcccatgcagggaggag
aacattgactcaagcgaggcccagcatgccactgacgagtctgaggatggaagcagttca
gagagcgagtcggaagagcagcaacgccagagggttcaggtgaacagcagcagcagcggt
aagaagcgggagcctttggctgtcacaaaaccccatcgacagctctgtcgctctccatgc
cttgaccgccccagtttttcccagagtagcactgtgcaagattttcgtgaggatgagacc
agcgcaggacctgggatcaagcctgccagtgacagggagtaccagaccaagatggacttt
gctttgaagttgggctattcgggagagcaggtggagactgtgctcaacaagttgggggcg
gctgctttaattaacgacgttcttgctgagttagtgaggcttggaaacaaagtagagcct
gaaagtcaaccgtgcagcagtacggccacattaatatcacggtccccctgtgttaaagag
actgttagtcccgaagtgtcagtagaagatgaatctgtggataccttcgataacctcagg
cccatcgtcatcgatggctcaaacgtggcaatgagccatggaaacaaagaggtattctct
tgtcgtggtatccaacttgctgttgaatggtttcgggagaaaggacacaaagacatcact
gtgtttgtcccagcatggaggaaggaacagtcgaggcctgatgccctcatcacagatcaa
gaaatcttacgcaagctggaaaaagacaagatcctggttttcaccccgtctcgaagagtt
caaggcaggagggtggtgtgctatgatgatcgcttcatagtgaagctggcttatgattct
gatggaattattgtgtcaaatgacaactacagggacttgcaaaatgagaagccagagtgg
aagaagttcatagaagagcgtctcctaatgtactcatttgtcaatgacaagtttatgcca
cctgatgatccactgggaagacatggtccaagtctagaaaatttcctccgtaagcgtccc
gttgttccagagcacaaaaaacagccctgcccctatgggaaaaagtgcacatatggacac
aagtgcaagtactatcatccagagcgtgtcaaccagccgcagcggtcagtggctgatgag
ctgcgagcctttgccaaattgtctgcagtgaagacaatgagtgagggggctttagccaaa
tgtggtactggtccagcaactgcaaagggggacagcaactctgaggccaaacgtgtggcc
cctaaacgtcagtctgaccccagtattcgttcagtggcctgtgaacctccagaggcactg
tccgtcattaggaagtctgagacaaattcagtgccttccctcgtgtctgctctcagtgtg
cccaccatgcagcctgccaaaagccacgcagctggggccttgaacacacgatcagccagc
agcccagtgccaggttctttgcagtttgcgcacagttctctggagcatatgtctagtgta
cagtatcctcctattttagttactaatagtcatggcgcttctgttacatacagtgaacag
ttcccaaagtatgactcagttagcgaccatggatattattcactgcacagtgatttttca
aacatgagcatgagcagcatgcataatgttgatagtttctgtagcatggagcacgagcat
ggtgtgtatcagagaaatcccagccactgccctgaatcctgtctcagccattcaaacagt
gactcgttctcctcttacggggacctgtacccaagctctgtggacagtagcttagaggag
agcatgaaggggcagcagcagtctcctgcacagggtagaatgcaggctttctctcatggg
tttcgtcatgaagcactgactagggtacagagctacggaccagaggagcccaagcagggc
ccccgtaaacaatctggatctcatctagcaccacacatccaacatgctacggtgggagcc
aggtccagctgccctggagactatcccctgactcagaatgtcctaccacccttgtcctca
cagcctacacggtctcttggtatgactcgtatggacagtatatcagattcaaggctatat
gacagtaacccaatgagacagaggcgacctccattgtgccgcgagcagcatgcaagctgg
gaccctctgccttgtggtaatgagtcctatggatatcattcatacccgctgagcaacagc
ctgatgccgtgttgcgagcgggtgatggtccgcagcatgccagacaaaatggaacaaatc
tggagctcaccatgggagaccccatctgcagctgaacaccaagagcggtacgttatccca
gaccaccagtatcaaacatatcggaacctttgtaacatctttcccgcttacatagttcac
tcagtaatggagaagaaccctcatttgacagatccacaacaacttgcagctgttattgtt
acaaaactgaggtcaagccactga

DBGET integrated database retrieval system