Lates calcarifer (barramundi perch): 108893863
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Entry
108893863 CDS
T04895
Symbol
nectin3b
Name
(RefSeq) nectin-3-like protein isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04514
Cell adhesion molecules
lcf04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108893863 (nectin3b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
108893863 (nectin3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108893863 (nectin3b)
04090 CD molecules [BR:
lcf04090
]
108893863 (nectin3b)
Cell adhesion molecules [BR:
lcf04515
]
Immunoglobulin superfamily
Nectin family
108893863 (nectin3b)
CD molecules [BR:
lcf04090
]
Proteins
108893863 (nectin3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
ig
C2-set_2
Ig_2
I-set
TM_ErbB1
MINT_RID
Zip
Motif
Other DBs
NCBI-GeneID:
108893863
NCBI-ProteinID:
XP_018547796
UniProt:
A0A4W6FLC4
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Position
LG20:complement(11502988..11532073)
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AA seq
552 aa
AA seq
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MLPPSHRSYFRQQGKVVLIHLLCSITGVWGSQVVVPQRVSAVLGKNMTLECRVEVGANLT
LTQSSWERRLPSGSVTVAVYNPEFGISIPPEFGHRLYFRSPSSHDATIVLENVGFADVGI
YTCKVATFPLGNTQASTTVNVLVEPKVYVSAGSTALIDGGNETVVATCIAERARPPAEVS
WESNLFGQSEVQLFDEVNGTTSTQVRYLWQPTRHVQGHTLTCVVRHPALQSDFRIPYQLN
VQFAPDISVVGYDGDWYVGRENVQMTCKANANPPAHHFRWIRLDSEMPEGVEIVNSTLLF
LRPLHRNDSGVYRCEVANDINLRSRDVRILIQDPPTMPSTITAPVLTGSASSTLVDDKGH
VLLSSPTLEALPESNLGSIVGGAVGGALFLLLLLSVVGVCYLRKQQTFHGNYYTKQYLGP
NDLQKAPTQHELHPTKAGSSSYQRDHDREEWGDRQLKQERDRRHHSNYNGEEYPSNGYTR
AMRESSHHSHQQNHHREHTQYSSPRQARYPHSPKHQGNGAPYLSDDCYDSGPEGDYVSHT
DGSVISRREWYV
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgccttctcaccggagttacttcagacagcagggcaaggtcgtgttaattcac
ctcttgtgcagtattacaggtgtgtggggcagtcaggtggtggtgcctcagagagtgagt
gctgtgctgggaaagaatatgacactggagtgtagggtggaggtgggcgcaaaccttact
cttactcagagctcctgggagcgccgtctgccttcaggctctgtcacagttgccgtctac
aacccagagtttggcatctccatccctccagagtttggccaccgcttgtattttcgttca
ccctcctctcacgatgccaccattgtactggaaaatgtgggctttgctgacgttgggatc
tatacctgtaaggttgctacatttcctctgggaaacactcaagcctccactactgtcaat
gtgcttgtggagccgaaggtctacgtgtctgcagggtcgactgccttgatcgacggtggc
aatgaaactgtggtggccacctgtattgctgagcgggcccggcctcctgctgaggtgtcc
tgggaatccaatctttttggccagtcagaagtgcagctatttgatgaggtcaacggcacc
accagcacgcaagtgcgctacctctggcagcccacacgccacgtccaaggccacacactc
acctgtgtggtccgccatcccgctctgcagagtgacttcaggatcccctaccagctcaat
gtgcagtttgctcctgatatctcagttgtgggctatgatggagactggtacgtgggtcgg
gaaaacgttcagatgacatgcaaagccaacgcaaacccaccagctcatcacttcagatgg
atcagattggacagtgaaatgccagagggggtggaaatagtgaacagcactttgctcttc
ctgcgtcccctccaccggaatgactctggagtttacaggtgcgaggttgccaatgacatc
aaccttcgcagccgggatgtgcgcattctcatacaagatcctcccaccatgccttccacc
attactgctcctgtcctaactggctctgcctcctccaccttagtggatgataagggccat
gtcctcctcagctcccccacacttgaagccctgcctgagagtaatcttggttccatagtg
ggtggggctgtgggtggggccttgttcctcctactgctgctgtctgtggttggtgtgtgt
tacctccggaaacagcagaccttccacgggaactactacaccaagcagtacctgggcccc
aatgacctccagaaagcccccacgcagcatgagctccatcccaccaaagctggcagcagc
tcctaccaacgggaccacgaccgagaagagtggggcgaccgccagctcaaacaagagcgt
gaccgccgtcaccatagcaactataatggagaggaatatccctctaatggctacactagg
gcaatgagggagagcagtcaccacagccatcagcagaatcaccaccgtgaacacacacag
tattctagtccacggcaggccagataccctcattcaccaaagcaccagggaaatggcgcc
ccctacctgtcagatgactgctacgatagtgggcccgagggtgactatgtgtctcacaca
gacggctcagtcatctcacgtagggagtggtacgtttga
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