Lates calcarifer (barramundi perch): 108893866
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Entry
108893866 CDS
T04895
Name
(RefSeq) latent-transforming growth factor beta-binding protein 3 isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108893866
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
108893866
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
FXa_inhibition
EGF_MSP1_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
108893866
NCBI-ProteinID:
XP_018547801
UniProt:
A0A4W6CD55
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All DBs
Position
LG20:complement(12842613..12875042)
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AA seq
1246 aa
AA seq
DB search
MPSLIAHLLVIWLSVHRLVWCTERSSTRERFKVVIAPLICKRICLKGQCQDTCEQGNNTT
LIAENGQAADTLIGQGFRVVVCPLTCMNGGVCSSRKHCLCPPGFTGRLCQFPLQQTQQAQ
AARGNKQPVYPLSLKPDGQKLVEQSGIGRTQLTQTHSVFTLPLSPVGHHSSEVQINVRVH
HTPDTSVVIQPLDQSDVKPPHKTGPRPIPARHKPKGRCFQETTPKQACNSTPLPVLTNQE
DCCGSVGNSWGQNKCYQCPKLPNASVKQTIVEDYGSTCPQGYKRFNSTHCQDINECSIQG
VCQNGDCLNTLGSFKCSCKAGLVLDRNRCVESPAEQAHCFLMASEARGCEHPLPTHLTQE
MCCCTVGKAWGRNCERCPQVGTVAFSKICPAGKGYFLQNIRETVAFPPIIFPRKPDKEEP
KRPERPPETTTPVQTPTSTSSPRVPVVKPTPPTIIRMTPGNDPFETQTKVLPETDECRLS
RNICGHGECETSLNGHICHCHPGYHLNPQRNICEDDNECESEPCGHGRGLCVNIEGSYKC
LCRQGYKHMVQHGRLKCVDVNECSKQDICGVGGQCMNLPGSYKCECHSGFRSKSHRHPAC
EDINECLNPDTCPNEQCENTPGSYECVPCLPGHEARSGTCYDINECQKPGICPNGRCENL
PGTYRCLCNEGFLPSADSKGCSDIDECEDVRLCAYGHCINTEGSFQCQCYPGYQRTQEGS
HCEDINECERPSNCQRGHCINSMGSYHCECQKGYTLVGGRRCQDIDECATDRSLCQPYGS
CENRPGSYVCVCNHGYVLSEDKHSCEVVRVLTDEKKECYLNLDDTVFCDSVLATNVTKQE
CCCSIGVGWGDHCEIYPCPVSQSAEFHFLCPNGQGLYYEEGLQYSLPAYHDIDECSLFAD
EICKKGRCENTLPGYECYCQQGFYYDSNLLECIDVNECHDESLCTNGHCVNTEGSYYCNC
KRPWTPDASKKKCVMVTVADVNECEDPANCKNGHCVDTPGSYYCICSPPWTLATDRNSCV
TPEEQADVNECQDPSYCKNGRCENTPGSFHCFCDPPRTFSAALKQCVYDDRTAAHKDVCF
LQVDEGLICSEPRNGMVVTYSECCCHYGRGWGPECNTCPPRNSEMFSRLCEMHLETESDG
EQDFLAAFANYNPGDSSEEDSDECSCANGRCVRSYLGTMCECNTGFRLDHSRTRCIDIDE
CAEPGARVSPCKNARCVNTAGSYKCFCKHGFMATRRPNICVRRRTR
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgccctctctgatcgcccatctgcttgtcatctggctgagcgtccacaggctggtgtgg
tgcacggagcgctcctccacacgggagcgcttcaaggtggtcatcgctcctctcatctgc
aagcggatctgcctgaagggacagtgtcaggatacgtgcgagcagggcaacaacaccacg
ctgatcgcggagaacgggcaggcggccgacactctcatcggacagggcttcagggtcgtt
gtgtgtcccctgacgtgtatgaatggaggagtatgcagctcgaggaagcactgcctctgc
ccgcctggcttcactggtcggctctgccagtttccactccagcagacgcagcaagctcag
gcagcgcggggcaacaagcagcctgtctaccccttatctcttaagccagacggccagaaa
ctggtggagcagtcaggcatagggcgtacccaattgacgcaaacacactcagtttttact
ttacctttgtcaccagtggggcaccactcgtctgaagtgcagattaacgtgcgcgttcac
cacacgccagacacctccgtagtcattcaacccctcgaccaatcggatgtcaagcctcct
cacaagacggggccgcgcccgatccctgccagacacaaaccaaaggggcggtgcttccag
gagaccacacccaaacaagcctgcaatagcaccccacttcctgttctgaccaatcaggag
gattgctgcggcagtgtggggaattcatggggacaaaacaagtgttatcagtgccctaaa
ctaccaaatgcatcagtcaaacagaccattgtggaagactatggctctacctgtccacaa
ggctataaaagattcaacagcactcactgtcaagatatcaacgagtgctccatacagggt
gtctgtcagaatggagactgtctgaacacactgggcagcttcaaatgttcctgtaaggcc
ggtttggtgctggacaggaatcgatgcgttgagtctccagccgagcaggctcactgcttc
cttatggcgtccgaggccaggggttgcgagcacccgctgccaacccacctcacccaggag
atgtgctgctgcacggtgggcaaagcctggggccgtaactgtgaaagatgtcctcaggtg
ggcacagtggccttcagtaagatctgccctgctgggaaaggctactttctccagaatatt
agagagaccgttgccttccctcccatcatcttcccccgcaagcctgataaggaggagcca
aagcggccggagaggccaccagagacgacgacccctgtgcagactcccaccagcaccagc
agtcctcgtgtacccgttgttaaacccactcctccgacaatcatccgaatgacaccgggc
aatgaccccttcgaaacacagacaaaagtcttgcccgagacagatgaatgtaggctaagc
aggaacatttgtggtcatggagagtgtgagaccagcctgaacggccacatctgtcactgc
caccctggctaccatctcaacccgcagaggaacatctgtgaggatgataatgaatgtgag
tctgagccgtgcggccacggcagaggcctttgcgtcaacatagaaggaagttacaaatgc
ctctgtcgtcagggatataaacacatggtgcagcatgggagacttaagtgcgtagatgtg
aacgagtgctctaagcaagatatctgtggtgtcggaggccagtgcatgaacctgcccggt
tcttataaatgtgaatgtcacagcgggttcaggagcaagtcacaccgtcatccagcctgt
gaagacataaatgagtgtttgaatcctgacacctgtcccaacgagcagtgtgagaacaca
ccaggctcctatgagtgtgtcccttgcttgcctggtcacgaggcccgctccggcacctgc
tatgacattaatgagtgtcagaagcctggcatctgtccgaatgggcggtgtgagaacctt
cctggtacttaccgttgcctgtgcaacgagggtttccttccatctgcagacagcaaaggg
tgcagtgacattgatgagtgtgaggacgtcaggctgtgtgcttacggccactgcatcaac
acagagggctcgtttcaatgtcagtgctacccgggataccagcgcacacaggaaggcagc
cactgtgaagatatcaatgagtgtgagaggccatcaaactgtcagaggggccactgtatc
aacagcatgggctcataccactgcgagtgccagaaaggctacacactggttggaggcagg
agatgccaagacatcgacgaatgtgccacagacagaagtctctgccagccctacggctct
tgtgagaacagaccaggctcgtatgtgtgtgtctgcaatcatggttatgtcctctcagag
gacaaacacagctgtgaggtggttcgagttctgacagacgagaagaaggagtgctacctg
aacctcgatgacactgtgttctgcgacagtgtcctggccaccaatgtcaccaagcaggag
tgctgctgctccattggagtgggatggggagaccactgtgagatctatccctgccctgtg
tcccagtcagctgagttccacttcctgtgtccaaacggccaaggtctctactatgaagaa
ggactccagtacagcctgcctgcctaccatgatatcgacgagtgttctttgttcgccgac
gaaatctgcaagaagggtcgctgtgagaacacactgccaggctacgagtgctactgtcaa
cagggcttctactatgacagcaaccttctcgagtgcatcgacgtgaacgaatgccacgac
gagtctctgtgcactaatggtcattgcgtgaacaccgagggttcctactactgcaactgc
aagcggccctggactccagatgccagcaagaagaagtgtgtgatggtgacagtagcagat
gtgaacgagtgtgaggacccagccaactgtaagaatgggcactgcgtggacactccgggg
tcgtactactgcatctgctctccgccctggaccctggccaccgaccgcaacagctgcgtg
actcctgaggaacaggctgatgtgaatgagtgccaggacccctcgtactgtaagaatggg
aggtgtgagaacacgcccggctcctttcactgtttttgcgaccctccccgcaccttcagt
gcagcgctgaaacagtgcgtctatgacgatcgcactgcagcccacaaggacgtgtgtttc
ctgcaggttgacgagggcctgatctgcagcgagccgagaaatggcatggtggtgacttac
tccgagtgctgctgtcactacggtcgcgggtgggggcccgagtgtaacacctgtccaccc
agaaactcagagatgttcagtcgtctgtgcgagatgcacctggagactgagtctgatggg
gaacaggatttcctggcagctttcgccaactacaacccaggtgacagctcagaggaggat
tcagacgaatgtagctgtgcaaacggccgctgtgtccgctcctacctgggcaccatgtgt
gaatgtaacacaggctttaggctggaccactcccgcacccgctgtatagacattgatgag
tgtgcagaaccaggagctcgtgtcagtccgtgcaagaatgctcgctgtgtgaacacggct
ggctcgtataagtgcttctgcaaacacggcttcatggccacacgcaggccaaacatatgc
gtccgtcgcagaactcggtaa
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