Lates calcarifer (barramundi perch): 108893877
Help
Entry
108893877 CDS
T04895
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108893877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108893877
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
108893877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
108893877
NCBI-ProteinID:
XP_018547833
UniProt:
A0A4W6FPR8
LinkDB
All DBs
Position
LG20:21333557..21336595
Genome browser
AA seq
277 aa
AA seq
DB search
MAAGFKTAEPLEYHRSFLKENCRPDGRELSEFRTTTLNIGSISTADGSALVKVGNTTVIC
GIKAELANPTVEAPGKGYIVPNVDLPPLCSSRFRPGPPGEQAQAASQFIADVIESSEVIQ
TEDLCIERGKLCWVLYCDMMCLDYDGNVLDACVVALLAALKNTQLPEVTVNTETCTPGVT
LEKRHGLRINKHPVATSFCIFDDSILIVDPTAEEESLATAQLTVVTDEEDRLYSLHKPGG
TSLSGQKLQECISRATARQREIQKLINKVIHSVKTAQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggtttcaagactgctgagcctctggagtaccacaggagctttctgaaagaa
aactgtcgacccgatgggcgggagctgtcagagttcagaaccacaacactgaacataggg
tccatatcaacagcagatggctcagccctagtgaaggttggaaacaccacagtcatctgt
gggatcaaagcggagttggcaaacccgacagtggaagcacctggtaaaggttacattgtc
cctaatgtggacctgccgcctctgtgttcatctcggtttcgaccgggcccaccaggagaa
caggcccaggctgccagccagttcatcgctgatgtaatcgaaagctctgaagtgatacaa
acagaggacctgtgcattgaaagaggaaagctctgctgggtgctctactgtgacatgatg
tgtctcgactatgatgggaacgtgttggatgcctgtgttgttgccctgctggctgccctg
aagaacacacaactcccagaggtcactgtcaacacagagacatgtacaccaggggtgact
ttagaaaagaggcacgggctgcgcattaacaaacatccggtcgctacctctttttgtatc
ttcgatgactccatactgattgtagaccccacagccgaggaggagagcctggcaacagct
cagctcactgtggtgacagatgaggaagatcggctctactctctacacaaaccaggtggg
acgtcactctcaggacagaagctgcaggagtgcatcagccgagcaacagcgcgacagaga
gagatccagaaactcattaacaaagtcatacacagcgtgaagacagcgcaatga
DBGET
integrated database retrieval system
