Lates calcarifer (barramundi perch): 108893882
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Entry
108893882 CDS
T04895
Symbol
sptbn4a
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04517
IgSF CAM signaling
lcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108893882 (sptbn4a)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108893882 (sptbn4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108893882 (sptbn4a)
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
108893882 (sptbn4a)
Intermediate filaments
Intermediate filament-binding proteins
108893882 (sptbn4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
PH_4
UPF0508_N
Motif
Other DBs
NCBI-GeneID:
108893882
NCBI-ProteinID:
XP_018547837
UniProt:
A0A4W6DZ08
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All DBs
Position
LG20:complement(6157972..6182834)
Genome browser
AA seq
1537 aa
AA seq
DB search
MLMARDTARDEAQKLHRKWLKHQAFMAELARNKEWLAKIEQEGQELIQEKPELRSVVQQK
LEEIRECWSDLESTTKAKARQLFENNKPEPAVKSYSDLDNQLSHLEQQPPQLEQAHHLPT
FNEQLQKFQAMESQIGDFYKDVGELGSLQGVCLPQRGMMAGDREGGEHSGMVETRIVRLI
EPLKERRRILLASKEMHQVAQDLEDEILWIQERLPLASCKDYGNNLQSVQQHVKKNQTLQ
RELTGRRARVEEVLDRAGIIASLRTPEVEFVREGAGHVRQLWEVLQLETERRSVLLDAAL
QAQQYYSEAAKVESWLSGQKLHLVSEEKGTDESSTLQLLKAHLALEQTVETYAETVGMLS
QQCQRLLELGHPESEQITKQQSHIDRLYVSLKDMVEHRKTKLEQQYWLYQLNKEVEELEK
WITEREAVASSTELGQDLEDVTVLQERFTKFASETNNIGQQRMEQVNKMVNEMIDCGHSD
AATIAEWKDGLNESWADLLELIETRRQMLAASHQLHKFFTDCKEVLAQIAGKMKQLPEVR
ACQANITNPATLQRLMHSFEHALQLLVAQVRQLQENAAQLRTIYAGEKAEAIMVKEQEVM
EAWKELLSSCEASRVQVTSVTDKVQFFSVVRENLMWMEGIMGQIGWDDPRDLTALEVMMK
QHQELKAKIDGRSKTIQQCADLGKILIAAGNPASEEIKEKLDSLLSKQKDLVEKWDKHQE
KLQHKQEKFQFAQETVKAEAWLKAKEPLITSKEPEGGEAQAQTDEAEQLILRHEAFRKAA
VTWKERFSSLRQLSAAEKKKEEEKKTTPLSSRRMFPLSCLTPNVPSTSATSSFLRQTVQA
HMEPKPLQTSLDLGASTATQRLSSTLASYNPVLNGSGYHGLEQQSSGKLVSSSYLGMNHQ
AVGGGNDSGFSALTSQSGGADTCTYLGINHQTAGSAESSGYFGLTTGCVGGMQNHLGTGR
LGSSGNLAQQPSSGGMGSPGFLPQQSMGSSGYLAQTQNLGSPGYLGQQPNLGSSGYLAQQ
PMGSSGYLAQQPNMGSSGYLAQQPNMGSSGYLAQQPNMGSSGYLAQNYQSSGGLGSSGIL
AQNHYSSGSLGSSGYLAQSGGIMDPKMAYAWQHLKADFMQPRINHIHKAINPLLEASRVQ
REQFGDIPMADMVGPESGLELLHGRLQRDPRGSRSDPQMDHLRREREYKLGRQTSSEQEI
QARLNELPMIVRQERYRRRLERQSSSEQEGSGKQRLQRQDSSDLEGSVKEGSDKRSGEKR
STMAEIVEQVQEREAAHARGEPYRPPSSLSAPVTRFDGRPRARDRPKPRRRPRPKEPEET
RRSRSAPATGAPTTPQPPSHTAHNEGFLYRKKATSSDLEAQQRSPNSKSWVNVYCVLKEG
KLTFYKDARNHTTTYNGEPPVDLSNCSFDPSMGYKKKKNVFILQINDGNNFVFHAKDEED
LKAWTSNITTCISEHEAMAKWDKPGTSSMDPDRSERKEKSEGDADARSERSELAEGEERS
EKERSEKGDGSEKLDTSEIADKIEGGAGGSSTSGKSK
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atgcttatggcccgagacacggcgcgggacgaggctcaaaagctacacaggaagtggctg
aagcaccaggcctttatggcagaactggcccgcaataaagaatggctggccaagatagaa
caggagggtcaggagctgatccaggagaagccagaactgcgttcagtcgttcagcagaag
ctggaggagatcagagagtgctggtccgacctggagagcacaaccaaggccaaggcccgc
cagctctttgaaaacaacaagcccgagccggcggtaaagagctactcggacctcgataac
cagctctcccacctggagcagcagcccccgcagctggaacaggcgcaccatctgcccaca
ttcaacgagcagctccagaaattccaggctatggagtctcagataggggacttttacaag
gatgtgggagagctggggagtttgcagggggtctgcctaccccagcgagggatgatggca
ggtgacagggagggcggcgagcactcaggcatggtggagacacgcatcgtccgcctcatt
gagcccctgaaggagagacgccgcatcctgctggcttccaaagagatgcaccaagtcgcc
caagacctggaggatgagatactgtggattcaggagaggcttcccttggcctcctgtaag
gattatgggaataatctccagagtgtacagcagcatgtaaaaaagaaccagacactccag
agggagctgacaggaaggcgggctcgtgttgaggaggttctagaccgggcgggaattatc
gcttcgctgaggacccctgaggtggagtttgtacgtgaaggggcggggcatgtgcgccag
ctgtgggaggttttacagctggagacagagaggaggtccgtgctgctggatgctgccctg
caggctcagcagtactacagtgaggcagctaaagtggaatcctggctgtcaggtcagaag
ctccatctcgtcagtgaagaaaaaggcacggatgagtcaagcaccctgcagctgctgaag
gcccacctggctctggagcaaacagtggaaacatatgcagagacagttggcatgttatcc
cagcaatgccaacgtctactagaactgggacacccagaaagtgagcagatcaccaagcag
cagtcccacatagatcggctgtatgtgtcactgaaggacatggtggaacacaggaagacc
aagctggagcaacagtactggctctatcagctcaacaaggaggtggaggagttagagaag
tggatcacggagcgcgaggcggtggccagttccaccgagctgggccaagatctcgaggat
gtcacggtgcttcaggagaggttcaccaagtttgcctcagaaaccaacaacattggccag
cagcgcatggagcaggtgaacaaaatggttaacgagatgattgactgtggccattcggac
gcagccaccattgctgagtggaaggacggactgaatgagtcatgggctgacctcctggag
ctaatagagacccgcagacagatgctggcagcatcacaccagctgcacaagttcttcact
gactgcaaagaggtcttggctcagatcgcagggaagatgaagcagctgccagaggtgagg
gcatgccaagccaacatcaccaatccagccaccctgcagagactcatgcactcctttgag
catgcccttcaactgctggtcgcacaggtgaggcagctgcaggagaatgctgcccagctg
aggaccatctatgctggtgagaaggctgaggccatcatggtcaaagagcaggaagtgatg
gaggcatggaaggagctgctgagctcctgtgaggccagtcgtgtccaggtcacctcagta
accgacaaggtgcagttcttctcagtggtgcgtgaaaacctgatgtggatggaaggcatc
atgggccagataggatgggatgaccccagggatttgacagctttggaggtgatgatgaaa
caacaccaagagctgaaagccaaaatagacggccgcagcaagaccatacagcagtgtgca
gatctcggcaagatcctgatagctgcaggcaacccggcatccgaagagataaaagagaag
ctggacagccttctgtctaagcagaaggatcttgttgagaaatgggacaaacaccaggaa
aagttacagcacaagcaggaaaagttccagtttgcccaggagacggtaaaagcggaagcc
tggctgaaagccaaggagccactgatcacctccaaggagccagaaggaggagaggcccag
gcccaaacagatgaggctgagcagctcatccttcgccatgaggccttccgcaaagctgct
gtaacctggaaagaacgcttcagctccctccgccagctttctgcagctgagaagaaaaaa
gaggaggagaaaaagacaaccccactctccagccgaaggatgttcccattgtcttgtctg
actccaaacgttccctcaaccagtgctacctcatctttcttgaggcagacagtacaggcg
catatggaacccaaacccttacaaaccagtctggatctgggtgcctccactgcaacccag
agattgtcctcaacgctagccagctacaacccagttttaaatggatcaggttaccacgga
ctggaacagcagagcagtgggaagttagtgagctcctcataccttgggatgaaccaccag
gcagtcggaggtggaaatgattccggtttctcagcgttgacctcccagagtggtggagca
gacacttgtacttaccttgggataaaccatcaaactgctggcagtgcagaaagctctggg
tactttggactgactactgggtgtgtgggtggtatgcaaaaccatcttggcactggcaga
ttaggaagttcgggtaacctagctcagcagccaagcagtggaggtatgggaagccctggc
tttctccctcagcagagtatgggcagttctggatatttggcccaaacacaaaatttggga
agtcctggatacttgggacaacagcctaatttagggagttcaggatatttggcacagcag
cctatggggagttctgggtatttggcacaacagcctaatatggggagttctgggtatttg
gcacaacagcctaatatggggagttctgggtatttggcacaacagcctaatatggggagt
tctggatacctagcacagaattatcagagtagtggggggttgggtagctcaggcattctg
gcacaaaatcattacagcagtggaagtctgggcagttctgggtacctagctcagagtggt
ggcatcatggaccctaaaatggcatatgcatggcagcacctaaaagctgacttcatgcag
cccagaatcaatcacatccacaaggccataaaccccctcctagaagccagcagagtgcag
cgggaacagttcggggacatcccgatggcagacatggtggggccagagtccgggctggag
ctcctccatggccgtctccagagggatccccgtggtagccgctctgaccctcagatggac
catctgaggcgagagagggagtacaaactcggtagacagacctccagcgaacaggagata
caggcccggctgaacgagctgccaatgattgtccgtcaagagcgctaccggaggcgcctg
gagaggcagtcgtccagtgaacaggaagggagcggcaagcagagactgcagagacaggac
tcaagtgacctggagggctccgttaaggagggctctgacaaacgctcaggggagaagaga
tctaccatggcagagattgtagaacaggtccaggagagagaggcagcacatgcacgagga
gaaccttatcggcctcctagcagcctctcagcaccagtgactcgttttgacggacgtcct
cgcgcccgagaccgtccgaaaccaaggaggaggccccgtccgaaagaaccagaggagaca
cgacgttctcgctctgccccagcaactggagccccaacgacaccccagccgccttcacac
actgcccataacgaaggcttcctctaccgcaaaaaggccactagctctgatctggaggct
cagcagaggagccccaacagtaagtcctgggtgaatgtatattgtgtgctgaaagaggga
aagctgaccttctacaaggatgctaggaaccacaccacaacatacaatggagagcctccc
gttgaccttagtaactgctcatttgatccttcaatgggatacaagaagaagaaaaacgtt
ttcattcttcagataaacgatggaaacaactttgtattccatgcaaaagatgaggaggac
ctgaaggcttggacttcaaatatcaccacctgtatatctgagcatgaggccatggccaag
tgggacaagcctggcacctcgtccatggaccctgaccgctcggagaggaaggagaagtcg
gagggggacgcagacgcaaggtcagagaggtctgagctcgccgaaggggaagagaggtct
gagaaggagaggtcagagaaaggggatggctctgagaagctagacacatcagaaattgcc
gacaagattgagggtggggcagggggctccagcacgtctggaaaaagcaaatga
DBGET
integrated database retrieval system
