Lates calcarifer (barramundi perch): 108893922
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Entry
108893922 CDS
T04895
Name
(RefSeq) ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1
KO
K18410
ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108893922
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Gene silencing
piRNA pathway
108893922
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
Ank_3
SAM_2
SAM_1
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
108893922
NCBI-ProteinID:
XP_018547912
UniProt:
A0A4W6C0L6
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Position
LG10:2963025..2985900
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AA seq
482 aa
AA seq
DB search
MGSFMDYAFPAGDESDASNDDWDIGCCSDKKSSCTKDVDAVVPHEEDSVLVLKRAISKGD
TGTVEQLLDDGMDVETRLGFEWTPLMCAVSVANYDLARLLLDRGASANFSKDHWTVLMAS
CTASASEDKIARCVELLLSRNADPNMVDRSQMTCLMLAARDGYSKVINLLVSHGADINVQ
DGKGYTALCIAVQYGREEAVLKLLHLGADKTIRTKAGKNPADLAVMFKHPQITRILASSS
YISSVQAFSSMEETLSKFFQTNSEPPPSKESVTKLDDLELLLHGLDLGYLADILTENDIT
WSYLLTMEKEDLEKIGITDPEHQQKVLSAVQQMHLDKVDLDTVSQLGAADSGSEELHNFL
ISVRQQCCYLTEIIQDVINRFPRQASQLVFSLDSKREAQAICNQLVVQTKDLQTEVTCLR
NLLCQMDEAGDCCQLPPPGSHGNRRSRYLARVALSTLGAAFLFLLCRAARGKVDLQMYRN
VC
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcttcatggattacgcctttccagctggagatgaaagcgatgccagcaatgac
gactgggatatcggatgctgttccgataaaaaatcttcttgcactaaggatgtggatgcg
gttgtgccacatgaagaagacagtgtgttggtgttgaaaagagccatcagcaaaggagac
actgggactgtcgaacagctgttggacgacggcatggacgtggagaccaggcttggcttt
gagtggactcctctcatgtgtgctgtcagtgtggctaattacgacctggccagactgcta
ctggaccgaggggcgagcgccaacttcagcaaagatcactggacggtgctcatggccagc
tgcactgcgtctgccagcgaggacaaaattgctcgctgcgtggagctcctgctgtccaga
aacgctgatcccaacatggtagacaggtcacaaatgacctgcctgatgctggcagccagg
gacggctacagtaaagtcattaacctgctggtgtcccatggagcagacatcaatgtccag
gatggcaaaggatacacagctttgtgtatagccgtgcagtacggcagagaggaggcagtg
ctaaagctcctccaccttggagcagacaaaaccatcaggaccaaggctggcaaaaaccct
gcagacctggccgtgatgttcaaacacccacagataacaaggatcctggcctcttcttcc
tacatctcctccgtgcaggccttcagctccatggaggagaccctgtctaagttcttccag
accaactctgaacctccaccttccaaggaaagcgtcaccaaactcgacgacctcgagctc
ctcctgcacggcctcgacctcggctacctcgctgacatcttgacagaaaatgatatcacc
tggagctacctgttgaccatggagaaggaggacctggagaagattggtatcacagaccca
gagcaccagcagaaggtgctgagtgctgtgcagcagatgcacctggacaaagtggacctg
gacacagtcagtcagctgggagctgcagacagcgggagtgaggagctgcataacttcctg
attagcgtgcgacagcagtgctgctacctgacagagataattcaggacgtcatcaaccgt
tttcctcgccaagcctctcagctggtcttctctctggactcgaagagggaggcccaggcc
atctgcaaccagctggtggtccagaccaaagacctgcagacggaagtcacctgccttcgc
aatctgctctgccagatggacgaggccggagattgctgtcaacttcctccacctggttcc
cacggcaaccggaggtcgcggtacctggccagagtcgcactgagcacgctcggagccgcc
ttcctcttcctcctgtgcagggcggctcgcggaaaggttgacctgcagatgtacaggaat
gtctgctaa
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