Lates calcarifer (barramundi perch): 108893954
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Entry
108893954 CDS
T04895
Name
(RefSeq) BUD13 homolog isoform X1
KO
K13106
pre-mRNA-splicing factor CWC26
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108893954
Spliceosome [BR:
lcf03041
]
Complex B
Other components
RES complex
108893954
Complex C
108893954
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Gene cluster
GFIT
Motif
Pfam:
Bud13
Motif
Other DBs
NCBI-GeneID:
108893954
NCBI-ProteinID:
XP_018547973
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All DBs
Position
LG20:14313756..14317677
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AA seq
513 aa
AA seq
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MMAAFAGSSKGPELSKAEYLKRYLSADEDAKKSKGKLKKKRRKVPERGLKIVDDDIDWRQ
MVNEEKAVEEDEDEAPVIAEVIDDRPDEVKQLEAFRTSNRWRVIGADEDKDTGGSHHDSP
ELSSKRGGHDSPVRKTRHDSPDVSPPRRGRHDSPDVSPPRRGRHDSPDVSPPRRGRHDSP
DISPPRRGRHDSPDLSPPQHSGKSGKVQSKDSSPTRRKPSASLSSKKRSPDPHRSPPAKR
SQNRHDSDSDQSPPRKKTLKGGASDSDQSPPRRRSKQTRGSDSDQSPPRRRPQSGKDSDG
DLSPPRRPGQSQGHRMLSGGKAGLVSVDVLRKEQEENRRRERNNQPLEDESRNAQTVFRD
KSGKRRDLDSEREEQKRKAGEKAAKDEKYAQWGKGLAQSQMHQQKLEDALHEAQKPLARH
YDDEDLDRMLREQEREGDPMAAMLRRKKDRSAKTQEKPRYKGPAPPPNRFNILPGYRWDG
VDRSNGFEQKRYTRIADKKAVQEAAYKWSVEDM
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgctttcgctggtagcagtaaaggaccagagctatccaaagctgagtaccta
aaacgttatttatccgccgatgaagatgccaagaaatcaaaggggaagcttaaaaagaaa
cgacgtaaggttcctgaaagaggacttaaaatagtagacgatgacatagactggagacag
atggtcaatgaggagaaggcggtggaagaggacgaagacgaagctccagtgattgctgag
gtgattgatgatcgaccagatgaggtgaagcagctggaggccttcagaaccagcaacaga
tggagagtgattggagctgatgaagataaagacacaggagggagtcaccatgactcacca
gagctgtcatcaaagagagggggacatgattctcctgtcagaaagacccgacatgactct
ccagacgtatcccctcccaggagaggtcgccatgactctccagacgtatcccctcccagg
agaggtcgccatgactctccagacgtatcccctcccaggagaggccgccacgactctcca
gatatatcccctcccaggagaggtcgtcatgactcgccagacttgtcacctcctcaacat
tcagggaaatcaggaaaggtgcaaagtaaagattcatcccccaccagaaggaagcccagc
gcatcactgtctagtaaaaagcgttcacctgatcctcatcggtcaccaccagcaaagagg
tctcagaacaggcatgactcagactctgaccagtcacctccacgcaaaaagacgctaaag
ggaggagcctcagactccgaccagtctcctccgaggaggcgttcaaaacaaacacgaggc
tctgattctgaccagtctccacccaggaggcggccgcagagtggaaaggactcagatgga
gatctgtcaccacctcgtagacctggccagtcacagggccataggatgctttctggtggg
aaggcaggtctggtctctgtagatgttttaaggaaagagcaagaagagaatcgacgcaga
gaaagaaacaaccagccactagaagatgaatcccgcaacgcccagactgtgttccgagac
aagagcggtaaaaggagggatttggattcggagagggaagaacagaagagaaaagctgga
gaaaaagcagcaaaggatgagaaatatgctcagtgggggaaagggttggcccagagccag
atgcatcagcaaaaacttgaagatgcactgcatgaagcccagaagccgctggcacgtcac
tacgatgacgaggatcttgaccggatgttgagagagcaggaaagggagggagatccgatg
gctgcgatgctaagacggaaaaaagatcgcagtgcaaagacacaagagaagcctcggtat
aaaggcccagcaccacctccaaaccggttcaatattctaccaggctatcgctgggatgga
gttgacaggtcaaatggttttgaacaaaaacgctacacgcggatagcagataaaaaagct
gtccaggaggcagcttataagtggagcgtagaggacatgtaa
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