Lates calcarifer (barramundi perch): 108894044
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Entry
108894044 CDS
T04895
Name
(RefSeq) Meckel syndrome type 1 protein isoform X3
KO
K19332
Meckel syndrome type 1 protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108894044
Cilium and associated proteins [BR:
lcf03037
]
Primary cilia and associated proteins
MKS complex
108894044
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Gene cluster
GFIT
Motif
Pfam:
B9-C2
Motif
Other DBs
NCBI-GeneID:
108894044
NCBI-ProteinID:
XP_018548116
UniProt:
A0AAJ8BKX9
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Position
LG20:complement(15203445..15213991)
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AA seq
564 aa
AA seq
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MADCWNTDTGEAVYRSRDAVKNLKIKVRIERVTSTAALSQHLQQEVLSQQDRGAIELETL
TSQGQTGDNEEELVVGWQEKLFSQYEMELFQNESACQTPLDRQYHTEVKALNRAKGRRNH
RIFTYTDHDRYTNCLPFHQLQHSTDLLTTTKSSPTFLAERMASVRHRRQDRRTMDCSIPK
SKIINWEPTEEFVKNSHVVNNSMQTMHIMGDLGPSGRLGQKENESLLVTIKTDGTGTVIV
KPDFNKGKEPYRIVTEGEKREVWRLTVENVSTTMKPEEKDREQNMYKDLYVRHKEYLTSL
VGQDFEMPPVGILRYLMNGEIVSAKGFEYDNLYIHFFMELPNNWSSLPFQSLSGVTQTCR
TKTLGKENVAFFSYPFSFEAFYMSEKESEESIPQWPVLYFKVLSLDSWQCYRTEGYGYLL
FPAMPGKHTITCHTWRPLQTGTVSALRRFFIGGSPELEDHSYVRIPGTFKGERLSRFGFC
TETTGSVTFNLHCIQQAKSFVDAAKMKKRRQKVFDHLGGFSQEGAVCTILEAFQRARRKM
QEARESLPRDLVTTTSQLQIESSA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcagactgttggaacacagacaccggagaagctgtgtatcggtcccgggatgctgtc
aaaaacttgaaaataaaggtgcgtatagagagggtgacctccacagcagccctctcgcag
cacctccagcaagaagttctgtcccagcaagacagaggagctattgaactggaaaccctc
acctcacaaggccagacaggggataatgaggaggaactggtggtgggctggcaggagaaa
ctcttcagtcagtatgagatggagctgttccagaatgagtcagcatgtcagacccctctg
gaccgacagtaccacacagaggtcaaggcactgaacagagctaagggccgacgaaatcac
aggattttcacatacactgatcatgatcgctacaccaactgtcttccattccaccaactg
cagcactccactgatttactgaccacaaccaaatccagccccactttcctggctgaaagg
atggccagtgtcagacacagacgacaggacagacgcaccatggactgtagtatccctaag
tcaaaaatcatcaactgggagcccacggaggagtttgtgaagaacagtcatgtggtgaat
aattcaatgcagactatgcacatcatgggagacctgggcccatctggaaggcttggacag
aaagagaatgaatctctgctggtaaccataaaaacagacggcactggaactgtcattgta
aaaccagatttcaacaaaggcaaagagccctacaggattgtaacagagggggaaaagaga
gaagtttggcgtctgactgtggagaacgtatccacaaccatgaaaccagaggagaaggac
agggagcagaacatgtacaaagatctgtacgtaaggcacaaggagtacctcactagcctc
gttggacaggactttgaaatgcctcctgtaggtattctgcgttaccttatgaacggagag
atagtctcagctaaaggctttgaatatgataacttatacatccacttcttcatggaacta
cccaacaattggtccagcttgccgttccagtctctctcaggggttacccagacctgcaga
accaaaacactagggaaggaaaatgtagctttcttcagttacccattcagctttgaggct
ttctacatgagtgaaaaagagagtgaggaatcaattccccagtggccagtgctctacttc
aaggttctatctctggactcctggcagtgctatcgaactgaaggctacggctatctgctt
tttcctgctatgcctggtaaacatacaataacatgccatacgtggagaccccttcagacg
gggacagtctctgctctgagacgcttctttattggagggtctccagagcttgaagaccac
agctacgtccgaataccagggaccttcaagggagagaggctgagtcgctttggcttttgc
actgaaaccacaggaagtgtcacctttaatctgcactgcatccagcaagccaagtccttt
gttgatgccgccaagatgaagaagaggaggcagaaagtctttgaccatttgggaggattt
agtcaggaaggagctgtctgcaccatcctggaggccttccagagggccaggagaaagatg
caagaggccagagaaagtcttcccagagaccttgtcaccaccacctcccaactccaaatc
gaatcctctgcgtag
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