Lates calcarifer (barramundi perch): 108894071
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Entry
108894071 CDS
T04895
Symbol
msx2b
Name
(RefSeq) homeobox protein MSH-D
KO
K09341
homeobox protein MSX
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108894071 (msx2b)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
108894071 (msx2b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
LodA_C
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
108894071
NCBI-ProteinID:
XP_018548153
UniProt:
A0A4W6EYY1
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Position
LG20:complement(19017507..19020173)
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AA seq
290 aa
AA seq
DB search
MRPGRKMASREDLGCSNSSEEDSNRAALAEGTAEEKKTTTSPAAVRRHHPFSVEALMAGR
KTNSRGGESTCCKPAEGGPVAVSPAGLNSLYICRDACSPPEGSRMSLTTAPSSPVKSEAS
ESEDCAPWVTNSSFSTQPRHISPACQLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSI
AERAEFSSSLTLTETQVKIWFQNRRAKAKRLQEAELEKLKMAADAKTAAVAAAAAGALHP
GFTLPLSLGAVSLYGQSYSAYHNHHHRPILPISPLGLYAAPLGYSMYHLS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagacctggaagaaagatggcctcacgggaagacttgggttgcagcaattcgtccgag
gaggacagtaaccgcgcggccttggcagagggaacagcggaggagaagaagacgacgaca
tctccggcagcggtgcgtcggcatcacccgttcagcgtggaggcgctcatggccgggaga
aagacgaacagccgcggcggagagtccacctgctgtaaacctgcagagggaggtcccgtg
gcggtgtcccctgcgggtttaaactctctgtatatatgtcgagatgcgtgcagccctccc
gaggggagccgaatgagcttgacgactgcgccttcgtcgccggtaaaatccgaggcatct
gagtcagaggactgcgcaccctgggtcaccaacagttcgttttccacacagcctcgtcac
atcagtcctgcctgtcagttgaggaaacacaagaccaaccgaaagccccgcacgccattc
accacgtcccagctcctggccctggagaggaagttcaggcagaagcagtacctgtccatc
gctgagcgggccgagttctcctcctccctgaccctgacggagacccaggtgaagatttgg
ttccagaatcgccgggcgaaagccaagaggctccaggaggccgaactggagaaactcaag
atggccgctgacgccaagacggcggcggtggcggctgccgctgctggagctttacaccct
ggctttacgttaccgctgtcgctgggggccgtgtcgctgtatggacagtcgtactctgcc
taccacaaccaccaccatagacccatactgcccatatcacctttaggactgtacgccgct
ccactgggctacagcatgtaccacttatcataa
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