Lates calcarifer (barramundi perch): 108894109
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Entry
108894109 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: protein O-mannosyl-transferase TMTC3
KO
K23424
protein O-mannosyl-transferase [EC:2.4.1.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108894109
Glycosyltransferases [BR:
lcf01003
]
O-Glycan biosynthesis
O-linked Man type
108894109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_17
TPR_1
TMTC_DUF1736
TPR_8
TPR_16
TPR_11
TPR_19
TPR_14
TPR_12
TPR_CcmH_CycH
TPR_9
TPR_7
TPR_6
ARM_TT21_C
ANAPC3
TPR_10
ARM_TT21_N
ARM_TT21
ARM_TT21_5th
TPR_MalT
HAT_Syf1_CNRKL1_N
TPR_21
ChAPs
Coatomer_E
FAT
TPR_INTS8
Motif
Other DBs
NCBI-GeneID:
108894109
NCBI-ProteinID:
XP_018548168
UniProt:
A0AAJ7VDG1
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All DBs
Position
LG10:complement(3467342..3490973)
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AA seq
934 aa
AA seq
DB search
MAIVSWKEILLLTGLVVGCYWNSLSCGFVFDDVSAILDNKDLRPSTPIRNLFLNDFWGTP
MAEERSHKSYRPLTVLTFRLNYLFSELSAASYHLLNVVLHAVVCVLFLRVCRLFLDKTSS
LVAALLFAVHPIHTEAVTGVVGRAELLSSIFLLAAFLAYTKSTSADHSIVWAPIALTVVL
VAAATLCKEQGITVVGICCVHEVFVAQGFTLPMLLDTLRQVLQGKDGFPYAVLQTLLKLI
VLVISTLLLVIIRVQVIQSQLPVFTRFDNPAAVSPTPTRQLTFNYLLPMNAWLLLNPSEL
CCDWTMGTIPLVESFLDLRNLATLVFYTFLGLLAYHSLRYRHSSAKTVIMALSLIVLPFI
PASNLFFPVGFVVAERVLYVPSMGFCVLVAHGFKIVSHKGHWKKISWLMIGVLLTTHAVK
TFNRNWDWESEYTLFTSALKVNKNNAKLWNNVGHALENQNNYARALRYFLQATRVQPDDI
GAHMNVGRTYKNLNKSKEAEDAYLVAKSLMPQVIPGKKYATRVAPNHLNVYINLANLIRA
NESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKLTEARDAYLRALELDRTNADLW
YNLAIVNIEMKDPSEALRNFNHALELNPRHKLALFNSALLMQESGEPKFWPEANRRFLTY
VEEEPEDANGYFNLGMLAMDANENAAAERWMRKAIGLQAGFRSALFNLALLYSQSKREMD
ALPVLDELLRHHPEHIKGLILKGDILMNHKKDTRGAKTCFERILRMDPTNVQGKHNLCVV
YFEERDLPRAERCLEETLALAPNEEYVRRHLSIVRSKMAAMSAAGQLLTSADTMTAKEEK
PKRVEEGTKEVAQGEEEGRGADAIGKGAGAEKNVRKSSPESLGGVGVDQSESLDSSQSDK
RTKGKSTKEIKDIEEKRAAALKRLEEIERILSGD
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggctatcgtgtcatggaaggagattttacttttgactggactggtggtgggatgttac
tggaacagtttgtcatgcggctttgtgtttgatgatgtctcagcaatccttgacaacaag
gacctacggccctcaacccctatccgcaacctattcctcaatgacttctggggaacgccc
atggctgaggagcggagccataaatcttaccgaccgctcactgtactcacctttcgactg
aactacctcttcagtgagctgagcgcagcttcataccatctgctcaatgtggttttacac
gctgtagtatgtgtgctcttcctgcgagtgtgtcggctgttcctggacaagacttccagc
ttggtggcagctttgctctttgctgtgcatcccatccatactgaagctgtcacaggtgtg
gttggcagagctgaacttctttcttcaatcttcctcctggctgctttcctagcctacaca
aaatcaacaagtgcagaccactccattgtttgggctcccatcgctctgacagttgttcta
gtggctgcagcaacactgtgtaaggagcagggaatcactgttgtcggcatctgctgtgtc
catgaagtatttgttgcacaagggtttaccttgcccatgctgttagacacactgcggcaa
gtcctgcagggtaaagacggtttcccctatgccgtgctgcaaactctgctgaagctcatt
gtcctcgtcatcagcaccctgctgcttgtcatcatcagggttcaggtcattcagtcccag
cttcctgtcttcaccagatttgataacccagcagcagtcagccccactcccaccagacaa
ctgactttcaactacctacttcctatgaacgcatggcttctgctgaatccctcagagctg
tgctgtgactggactatgggcaccattcctctggtggagtcattcctagacctccgtaac
ctggccacactggtgttctacacttttctgggcctgctagcttaccacagcctgcgctac
agacacagctctgccaagaccgtcatcatggccctgtctttgatcgtcctgcctttcatt
cctgcatccaacctcttcttccccgtgggttttgttgtggcagagagggtactttatgtg
cctagcatgggcttctgtgttcttgttgcacatgggttcaagattgtctcacataaaggt
cactggaagaagatttcctggctaatgattggagtgcttttaactacacatgcagtgaaa
actttcaacaggaattgggactgggagtcagagtatactctattcacctctgccctgaag
gtcaacaagaacaatgccaagttgtggaataatgtcggccatgctctagagaatcaaaat
aattatgcgagggctctgcggtattttctccaggccactcgtgttcagccagatgacatt
ggtgctcacatgaatgttggaagaacctacaagaacttgaacaagtccaaagaagcagaa
gatgcctacttggttgccaaatctcttatgccacaggttattcctggtaagaaatatgca
acacgtgtggctccaaaccatctaaacgtttacataaacctggccaatctgattcgggcc
aacgagtcacgcctcgaggaggccgaccagctctaccgacaagcaatcagcatgagacca
gacttcaaacaagcctacatcagcagaggggagctactgctgaagatgaacaagctcaca
gaggcccgggatgcctacctccgagccttggagcttgaccgcacgaacgctgacctttgg
tataacctggctatcgtcaacatagagatgaaggacccatcagaagccctgagaaacttt
aaccacgccctggagctcaacccacgccacaagctggcgctcttcaactcagcacttctc
atgcaggagtctggtgagccaaagttctggcctgaggctaaccgtcgcttcctcacctac
gtggaggaggagcctgaagatgccaacggctacttcaacctcggcatgttggccatggat
gccaatgaaaacgcagcagctgaacggtggatgcgtaaagccattggtttgcaggccggc
ttccgcagtgccctgtttaacctggcactgctttactctcagtccaaacgcgagatggat
gcgctgcctgtgttggatgagcttctgcgccaccatccagaacacatcaagggcctaatt
ctgaagggcgatatcctcatgaatcacaagaaagacacccgtggtgctaaaacctgcttt
gaacgcattttacgcatggaccccaccaatgtgcaaggcaagcacaacttgtgcgtggtc
tactttgaggagcgtgacctgccacgggctgagcgctgcctggaggaaacactggcccta
gcaccgaacgaggaatatgtgcgtcgtcacttgagcattgtgcgaagtaaaatggctgcc
atgagcgcagccgggcagctgcttacttcggcagacaccatgacagcaaaggaggaaaag
ccaaagagagttgaggaggggacaaaggaggttgctcagggtgaggaggaagggaggggt
gctgatgccattggaaagggggctggggctgagaagaatgtgcggaaatcctctccagaa
agccttggaggtgtgggcgtggaccaatcagagtctttggacagtagccagtctgacaag
cggactaagggtaagtccactaaagagattaaagatatagaggaaaaaagggcagccgcc
ttgaagagactagaggagatagagcgcatattaagtggtgattga
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