Lates calcarifer (barramundi perch): 108894145
Help
Entry
108894145 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: mucin-5AC
KO
K22023
mucin-6/19
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108894145
Membrane trafficking [BR:
lcf04131
]
Others
Mucins
Secretory mucins
108894145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWD
C8
Mucin2_WxxW
TIL
VWC
VWF
Motif
Other DBs
NCBI-GeneID:
108894145
NCBI-ProteinID:
XP_050934287
UniProt:
A0AAJ8DX45
LinkDB
All DBs
Position
LG2:complement(15455050..15482483)
Genome browser
AA seq
2093 aa
AA seq
DB search
MAKEWLLWLTLSAIVAAWQSEAKSAVNTFSSMSQIPEKLTGVSPIHNGQVCSTWGNFHFK
TFDGDVFQLHSTCNYVLTSSCRSSYKDFNIQIRRQQVNGHPTIKNIIMKLEGSVVELSKG
SVVVDGKVAVLPLSHSGVFIEKTPTYIKIKANLGLAAIWNEEDSFLVELDLKYKNQTCGL
CGDFNGLQLHNEFYSHGSKISPVDFANFWKMDGPTESCSDYTLESTQSCNDMKPLCEQIL
TGPAFNSCHSLLDVDAFTSACVADLCQCGSDVDEHADPFCLCNTVSEFSRQCVHAGGKPH
NWRTKELCWKSCPYKMEYKECGSPCADTCSNPEASRTCENHCIDGCFCPAGMVLDDLNGK
GCVPLNECSCSYNKKIYGHGESYSSNCKKCVCESGQWKCMEKNCPGTCSVEGGAHVNTFD
GKVYTFHGDCSYILAKDCSGTQFVVQGELVQCGLTESETCLKSVTLGLSGGANVITIQPS
GKVFVNGIYAQLPFSAAGISTFRASSFYLLVQTSVGVLLEVQLQPVMQIYITVTSDYQAK
TCGLCGNFNSNQADDFLKLSGVPDATAAGFVNSWKTHAGCTDVKSNFENPCSLSLDNEKY
AMHWCSMLNDPQGVFASCHSEISPDSYKENCMYDSCNCEKSEDCMCAAVSSYVHACAAAG
IQIKNWRKTICGKYASSCQNNMVYSNNITSNSHTCRCLGTTDLSCHATFPPIDGCICTKG
TYLDDSGNCVPSKACPCYDKGSVVPPGQVVNKDGVMCTCKEGKFSCIGEFIAQPAACAPP
TVFFNCSTNGPAAKGTECEKSCNTLDMACVATECVSGCMCPSGMVSDGKGGCIKPEACPC
VHNGISYHPGETTRVDCNTCTCKDRKWICTNNQCDGTCSVYGAGHYMTFDQKRFTFDGNC
EYILTQDYCGSAESNGTFRVITENVPCGTTGTTCSKTIRIFLESAEVILTEGSYQLLSSG
NEETVPFRYSTMGNYLVIEANNGLIVMWDRKTSLFIKLSPKYKGRVCGLCGSYDSNANND
FTTRCHAVVVSPLVFGNSWKDLPSCPDAQSITSPCRDNPFRQSWAQKQCSIIQSDVFSAC
HSTVDPAPYYEACVFDSCACDTGGDCECFCTAVAAYAESCNQAGVCIQWRTPKICPIFCD
YYNPPGECEWHYMPCGSPCMKTCRNPSGSCSTQIPPLEGCYPKCPSAQPYFDEDTMTCVV
QEQCGCYDKEGKHYNNGDKVPTTENCHTCTCSAMTIKCQYDAQACTCTYHGNKYPPGNTI
YNTTDGHGNCITAVCGKNGTIDRRTYPCLVPTPSTHATTTTTSQSPTTFVFTSTTPGMWK
CMPNKAYSIVTSKINHRTPSDTYNYKTCYPNILSGNNLLLTTTTQPPTTTTTTPQPTTPA
PCPDGHDMICSWSDWINLGKPTTGPNGGDNESIQKIISAGYHVCSTPIEVQCRAALYPGL
SISQVGQAVTCNKNVGLICNNKQQGLQQECFDYEIKFKCCECPPTPTQPSTTTTETTTTQ
PPTTTTTTTTTQPPTTTTTTTQPPTTTTTTTQPPTTTTTTPQPTTPAPCPDGHDMICSWS
DWINLGKPTTGPNGGDNESIQKIISAGYHVCSTPIEVQCRAALYPGLSISQVGQAVTCNK
NVGLICNNKQQGLQQECFDYEIKFKCCECPPTPTQPSTTTTETTTTQPPTTTTTTTQPPT
TXTTTTTTHHTTTETTTTQPPTTTTQPPTTTTETTTTQPPTTTTTTPQPTTPAPCPDGHD
MICSWSDWINLGKPTTGPNGGDNESIQKIISAGYHVCSTPIEVQWSTVYNVTDHDGHCFI
GYCNETCHVVAKHHQCPPNNECVDVNPPRKDGESWKESKCSVGTCINGKVTYTHTPCPIQ
KPVVCANNFPAIEVWDDDGCCSHYECQCICYGWGDPHYVTFDGTYYGFQGNCSYWLVKEI
LPKYNFSVMIDNYYCGAPDGLSCPQSITVFYQSYKIFITQKDINGIFTNQISVNDRPVSP
AYQNADFRIATTGIDTVLVIPKIHAKVTFSGLIFSIYLPYGEFASNTEGQCGTCDNNRTD
DCMLPSGKIDPSCPHMAHEWHANNSYCEPPSHPTPTPKPDTCNTTICDIIKSR
NT seq
6282 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggagtggctgctatggctgaccctgtctgccattgtagctgcctggcaaagc
gaggcaaagtctgctgtgaacactttctcctcaatgtcccagattcctgaaaaattaaca
ggtgtgagtcccatccacaatggccaagtttgcagtacatggggcaacttccacttcaag
acctttgatggggatgttttccagttgcactccacctgcaactacgtcctgacgtcttca
tgcaggagcagctacaaggacttcaacatccagataagaagacagcaggtcaatggccat
ccaaccatcaaaaacatcatcatgaagctggagggttcagtggtggagctctccaaaggc
tcagtggtcgttgatggcaaagttgctgtgttaccacttagtcattcaggagtgttcatt
gaaaaaactcccacctacatcaaaatcaaagcaaacctgggattagccgctatctggaat
gaggaggactcttttctggtggagctagacctgaagtacaagaaccaaacctgtggtctt
tgtggagactttaatgggcttcagctccacaacgagttctacagtcatggttcaaaaatt
tccccagtggattttgccaacttctggaaaatggatggtccaactgaaagctgttcagac
tacacactggaatcaacacaaagctgcaacgacatgaaacctctgtgcgagcagatcctc
acagggccggccttcaacagctgtcacagtctgctggatgttgatgccttcacctctgcc
tgtgttgcagacctttgccagtgtggcagtgatgtagatgaacatgcagaccccttctgc
ctgtgcaacactgtgtctgagttctccagacagtgtgtccatgcgggtggcaagccccac
aactggagaaccaaagagctctgctggaagtcatgtccctacaaaatggagtacaaagag
tgtggaagtccctgtgctgatacctgctctaacccagaggccagccgcacctgtgaaaat
cactgtatcgatggatgcttctgcccggcaggcatggtgctggatgacttaaatggcaag
ggttgtgttccactcaatgagtgctcctgcagctacaacaagaagatctatggacatgga
gagtcctactcaagtaactgcaaaaaatgtgtgtgtgagagtggtcaatggaaatgtatg
gagaagaactgtccaggaacctgctctgtggagggaggagctcatgtcaacacttttgac
ggaaaggtctacaccttccatggggactgctcctacattctagctaaggactgcagtgga
actcagtttgtggtacagggagaactagtgcagtgtggactgactgaaagtgaaacctgc
ctgaagtctgttaccttgggtttgtctggaggggctaatgtcatcaccatccagcccagt
ggaaaggtttttgtgaacggcatctacgcccagttacctttttctgctgctggcatctcc
accttcagagcatcctctttctacctgctggtccagacatctgtcggtgttctgctagag
gtgcagctccagccagtcatgcagatctacatcacagtgaccagtgactatcaggccaag
acctgtggtctgtgtggtaacttcaatagtaaccaagctgatgacttccttaagctcagc
ggtgttccagatgccacagcagctggttttgttaacagctggaagacacatgctggttgc
acagatgtgaaaagcaactttgagaacccctgcagtctcagtctggataatgagaagtac
gccatgcactggtgctccatgctgaatgatccccagggagtgtttgcttcctgtcactca
gaaatcagtcctgactcttacaaagagaactgcatgtatgacagctgtaactgcgagaag
agtgaggactgcatgtgtgctgcagtctcctcttacgtccatgcctgtgcagcagcagga
atccagatcaagaactggaggaagaccatttgtgggaaatatgccagctcttgccagaac
aacatggtctactccaacaacatcacatcgaacagtcacacctgccgctgccttggcacc
acagatctcagctgccacgccacctttccgcctattgacggctgtatctgtacaaaggga
acctatctggatgactctgggaactgtgtcccatctaaagcttgtccatgttatgataaa
ggctccgtggtgcctcctggacaggtcgtcaacaaggatggggtcatgtgcacctgtaaa
gagggcaaattcagctgcattggagagtttattgcacagccagcggcctgtgctcctccc
actgtgtttttcaactgctctactaatggtccagctgcaaaaggaacggagtgcgagaag
agctgcaacacattagacatggcttgtgtggccacagagtgcgtatctggctgtatgtgt
ccatctgggatggtatctgatggtaaaggaggctgcattaagccagaggcctgtccttgt
gttcataatggcatctcctaccaccctggtgagaccactagggtggactgcaacacctgc
acttgtaaagataggaaatggatctgtaccaacaatcagtgtgatggaacctgctctgtc
tatggtgctggacactacatgacttttgatcagaagcggttcacctttgatggcaactgt
gaatacattctcactcaggactactgtggcagtgctgagagtaatggaaccttcagagtg
atcactgagaatgttccgtgtggaaccacaggaaccacctgttccaagaccatcaggatc
ttcttggagagtgcagaagtgattctaacagagggaagctaccagctgctttcaagtgga
aatgaagaaactgttccattccggtacagcactatgggcaactacctggtaattgaagcc
aacaatggactcattgtcatgtgggacaggaagaccagcttgttcatcaagctcagtcca
aaatataaggggcgtgtttgtgggctgtgtggcagctatgacagcaatgcaaataatgac
ttcactacacggtgccatgctgtagtggtcagtccattggtgtttggcaatagctggaag
gatttaccaagctgtcctgatgctcagagcatcaccagcccctgtagagacaacccattc
agacagtcgtgggcccagaaacagtgcagcatcatacagagtgatgtcttctctgcctgc
cactccaccgtggatcctgctccatactatgaggcatgtgtgtttgactcatgtgcttgt
gacactggtggagactgcgagtgtttctgcactgctgtggctgcttatgcggaatcctgt
aatcaagctggtgtctgtatacaatggagaacaccaaagatctgccctatcttctgtgat
tactacaatccccctggtgaatgtgaatggcactacatgccatgtggatctccctgtatg
aaaacctgcaggaacccctcaggcagctgctccacacagatacctcctctagaaggttgc
tatccaaaatgtccttctgctcagccatacttcgatgaggatacaatgacatgtgttgtg
caagaacaatgtggctgctatgataaggaggggaaacactataataatggtgacaaagtc
ccaacaactgaaaactgtcatacatgtacatgcagtgcaatgaccatcaaatgccagtat
gatgcccaagcctgtacttgcacatatcatggaaacaaatatccccctggcaataccatc
tataacacaacagatggacatggaaactgcatcacagcagtgtgtgggaagaatggtacc
attgacaggaggacatacccatgcttagtgcctacaccaagtacacatgcaaccactact
acaacaagccagtctccaaccacctttgtttttacatcaaccacaccaggtatgtggaag
tgcatgcccaacaaagcctactccatcgtcacctccaagatcaaccacagaacccccagt
gatacctacaactacaaaacatgttaccccaacatcttgtcaggaaacaatctgctcttg
acaactacaactcaaccacctacaactacaacaactacacctcagccaactacacctgca
ccttgccctgatggacatgatatgatatgtagttggtcagactggattaatctgggaaag
ccaacaacaggccctaatggtggagacaatgaatccatccagaagataatctctgcaggg
taccatgtttgctcaactcccatagaagtccagtgtagagctgctctttatccaggtcta
tcaatttcacaggttggacaagctgtgacttgcaataaaaatgtgggtctcatatgtaac
aacaaacaacaagggcttcaacaagagtgttttgattatgagattaaattcaaatgctgt
gagtgtccaccaactccaactcagccatctacaactacaactgaaacaactacaactcaa
ccacctacaactacaacaactacaactacaactcagccacctacaactacaacaactaca
actcagccacctacaactacaacaactacaactcaaccacctacaactacaacaactaca
cctcagccaactacacctgcgccttgccctgatggacatgatatgatatgtagttggtca
gactggattaatctgggaaagcccacaacaggccctaatggtggagacaatgaatccatc
cagaagataatctctgcagggtaccatgtttgctcaactcccatagaagtccagtgtaga
gctgctctttatccaggtctatcaatttcacaggttggacaagctgtgacttgcaataaa
aatgtgggtctcatatgtaacaacaaacaacaagggcttcaacaagagtgttttgattat
gagattaaattcaaatgctgtgagtgtccaccaactccaactcagccatctacaactaca
actgaaacaactacaactcaaccacctacaactacaacaactacaactcaaccacctaca
actngaacaactacaactacaactcaccacactacaactgaaacaactacaactcagcca
ccaacaactacaactcagccacctacaactacaactgaaacaactacaactcaaccacct
acaactacaacaactacacctcagccaactacacctgcgccttgccctgatggacatgat
atgatatgtagttggtcagactggattaatctgggaaagcccacaacaggccctaatggt
ggagacaatgaatccatccagaagataatctctgcagggtaccatgtttgctcaactccc
atagaagtccagtggtccacggtctacaatgtgacagaccacgatggccactgtttcata
gggtactgcaatgagacctgtcatgttgtggccaaacaccaccaatgtcctccaaataat
gagtgtgttgatgtaaatcctccaagaaaggatggtgaaagttggaaggaaagtaaatgt
agtgtaggaacatgtattaacggcaaggttacctatacccacacaccatgtccaattcag
aagcctgtagtatgtgcaaataacttccctgctattgaagtctgggatgatgatggatgc
tgctcacactatgaatgccaatgtatctgctacggatggggagacccccattatgtcacc
ttcgatggaacctactatggttttcaaggcaactgttcctactggctagttaaagagatc
ttgcccaaatacaacttcagcgttatgatcgacaactactactgtggtgcacctgatggt
ttgtcctgtcctcagtccatcacagtcttctaccaaagctataagatttttattacacag
aaggatattaatggcattttcacaaaccagatttctgtgaatgacaggcctgtgagtcct
gcataccagaatgctgatttccgtatagccaccactggtattgatacagtgctcgtgatc
ccgaaaattcatgccaaggttaccttctctgggctcatattcagtatctacctgccctat
ggtgaatttgctagcaacaccgagggacagtgtggcacgtgtgacaacaaccggacagat
gattgcatgttgcccagtggcaaaattgatccgtcatgtcctcatatggcacacgagtgg
catgctaacaacagttactgtgaacctccaagtcaccccacaccaacacctaagcctgat
acctgtaatacaactatctgtgacatcatcaagagcaggtga
DBGET
integrated database retrieval system
