KEGG   Lates calcarifer (barramundi perch): 108894177
Entry
108894177         CDS       T04895                                 
Name
(RefSeq) ras-related protein Rab-11A
  KO
K07904  Ras-related protein Rab-11A
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108894177
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108894177
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcf04147]
    108894177
   04031 GTP-binding proteins [BR:lcf04031]
    108894177
Membrane trafficking [BR:lcf04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    108894177
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   108894177
  Exosomal proteins of colorectal cancer cells
   108894177
GTP-binding proteins [BR:lcf04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab11/25 [OT]
    108894177
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU RsgA_GTPase AAA_22 PduV-EutP AAA_16 ABC_tran AAA_14 TniB NTPase_1 Gtr1_RagA YtzH FeoB_N AAA_24 DUF3289 AAA_21 FAD-SLDH
Other DBs
NCBI-GeneID: 108894177
NCBI-ProteinID: XP_018548219
UniProt: A0AAJ7VDH0
LinkDB
Position
LG2:complement(13220142..13227122)
AA seq 215 aa
MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTV
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
LVGNKSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQ
MSERQESDMSPSNNVVNIQVQPTENKPKMQCCQNI
NT seq 648 nt   +upstreamnt  +downstreamnt
atgggcactagagacgacgagtatgactatttgttcaaagtggtccttatcggtgactca
ggtgtgggaaagagtaacctgctgtcccgtttcacccgcaacgagttcaacctggagagt
aagagcaccattggagttgagtttgccacgcgcagcatccaggtggacggcaagacggtg
aaggcccagatctgggacacagccggacaggagcgctaccgtgccatcacatcagcgtac
taccgcggggcggtgggggctctcctggtctacgacatcgccaaacatctaacttacgaa
aacgtggagcgctggctgaaggaactgagagatcacgccgacagcaacatcgtcatcatg
cttgtgggcaacaagagcgacctgcgtcaccttcgggctgtccccaccgacgaggcccgg
gcttttgccgagaagaacggtttatcttttctggagacatcggctctggactccaccaac
gtagagacggccttccagaccatccttacagagatctaccgtatcgtctctcagaagcag
atgtcggagcgtcaggagagcgacatgtcccccagtaacaacgtggtcaacatccaggtg
cagcccactgagaacaaaccaaagatgcagtgctgtcagaacatctag

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