Lates calcarifer (barramundi perch): 108894225
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Entry
108894225 CDS
T04895
Symbol
fhod1
Name
(RefSeq) FH1/FH2 domain-containing protein 1 isoform X1
KO
K23938
FH1/FH2 domain-containing protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108894225 (fhod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108894225 (fhod1)
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
108894225 (fhod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
FH3_FHOD1-3
Formin_GBD_N
Motif
Other DBs
NCBI-GeneID:
108894225
NCBI-ProteinID:
XP_018548321
UniProt:
A0AAJ7VDN0
LinkDB
All DBs
Position
LG2:14791326..14838452
Genome browser
AA seq
1414 aa
AA seq
DB search
MASITCRVQYLEDSDPFICTNFPEPRRPPTVNLEENLPLSEQIAGIHKLLEAPLKLEECT
LQLSPSGNYLDLDSSLAEQRDELEIFYEDVAKGKKPILILRTQLSVRVHSILEKLYNSHG
PELRRSLFSLKQLFQDDKDLVPEFVASEGLTCFIKVGAEADHNYQNYILRALSQIMLFVD
GMNGVINHSETVQWLYTLTGSLSRLVVKTALKLLIVFVEYSESNSPLLINAVNTVDEQRG
MKPWSYMMDILEEKNGSDTELLMFAMTLINKTLAVLPDQDSFYDVTDSLEQLGMETIIHK
HMNNKGTEPDLRTQFTIYETALRYEDGDVDDSSPHLRKERRKMATGDQEGRKSRRTSSQN
LPDLLSSSAGSSPSTSPLPPAFLSPSTTANNPLSPAISSASSTSPTAGLSSRASSPLTSD
AGSPASSPSGSQRGSPVPPHTAPNGTMTTEQETKTPSSPSRSFLSHHMSALGLSRKSRLF
SKTSSISEEPSAACSSPSSPSDASLQEKSSQSNPEQSGTKTETKTGFNSGEADWLFCPDD
CNVNQDKPVLKRFEGNFLRNLAATQWEKKRRSKHLSQSRLSSSDDLITPGPQLTAEEGRG
VPAAETSLHTSSSSDPNGLSDSQNDPAAASSVQRQCSTLSNDKKFLLDMLYSKTAAAAPL
SPTAAAPDTTEEEGNFQSGGGDLGGRGRVLERLSSFKARSAESSGSSESSASRRAELEGL
EGSAQAALARLAEERQQNRHLRQQSSIDVESHARRLETTQMTPLGPGGPTDAWDQLQPSA
AALRIKDLDFSDLLDEEDIDVLDMDTFDSSSSSSCFSGIPPPPPPPPGLAGGPPPPPPPP
PPPPPGGLAPPPPPPPPPGAPPPPLFSSSAAAVFAQKKKKTVKLFWKELKQADRPQKCRF
GRGTVWASLDKVAVDTARLEHLFESKAKELPVAKKGPEMKKSEILVLDPKRSNAINIGMT
VLPAVHVIKTAILNFDEFAISKEGIEKILTMTPTEEEKQKIQEAQLANPDVPLGTAEQFL
FSLASISALTPRLQLWAFKLNYEALEKEIAEPLFDLKLGMEQLASNQTFRRILATLLAIG
NFLNSSNAKGFELGYLEKVVEVKDTVHRQSLLHHTCNLVVENYPESSDVYSEIPAITRSA
KVDFELLSENLVQLERRCKASWDNLKVVAKHETKAVLKNKMTDFLKDCTQRIIILKVVHR
RVINRFHSFLLFLGQPSSSVRDIKVTSFCRIISEFALEYRTTRERVLTLKRKRAAHRERT
KTRGKMITETEKFSGAVPRPDSPSPVSQAAEADAGQEEEHENMKNLLISNNNSLSADHRG
LRRSRAVRSMGRVSPSQMTIAKEDGTSSQDDATDEIMDRLVKSVTQNPSDRASSPKTRKR
SRLNRKSLRRTLKSGLSLDVVQALGLNNKTGDKV
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atggcctccatcacttgccgggtccagtatctggaggactcggatccgttcatctgcaca
aacttccctgaacctcggagacctccgacggtgaacctggaggagaacctgccgctcagt
gagcagatcgccgggatacacaagctgctggaggcgccgctgaagctggaggaatgcacc
cttcagttgtctcccagtggaaactatctggacctggactcgtctctggccgagcagagg
gatgagctggagatcttctatgaagatgtggcaaaaggaaagaaacccattctgatcctg
aggactcagctctctgttcgtgtccactccatcctcgagaagctgtataactctcatggt
ccggagctcagacggtctctcttctctctcaaacagctcttccaggatgataaagacctt
gttccagagttcgtggcgtctgaaggtttgacatgtttcattaaagttggagcagaggcc
gaccataactaccagaactacatcctgagagctctcagtcagatcatgctgtttgtggac
gggatgaacggagtgataaaccacagcgagacggtgcagtggctctacacactgacagga
agtctgtcccgtctggtggtgaaaacagctctgaagctgctcatcgtgtttgtggagtat
tcagagtccaacagtcctctgctcatcaacgctgtaaacacagtggacgaacagagaggt
atgaaaccgtggagttacatgatggacatcctggaggagaaaaatggctccgacacagaa
ctgctcatgttcgccatgacactcatcaacaagactctggcggtgctcccagaccaggac
tcgttctacgatgtgacagacagtctggagcagctggggatggagaccatcatccacaaa
cacatgaacaacaaggggacggagcctgacctccgaactcagttcaccatctatgagaca
gctctgaggtacgaggatggagatgtggacgactcctcccctcacctccgcaaagagaga
agaaagatggccaccggtgatcaggagggacgaaagagccgccgcacatccagtcaaaat
ctccccgacctcctgtcctcctccgcgggctcctccccctccacctcccccctccctcct
gccttcctctccccttccaccactgccaacaacccactctcccctgccatctcctccgcc
tcctcaaccagtcccacggccgggctcagcagcagggcctcgtccccgctgacctctgac
gccggcagccccgcctccagtccgtccggatcccagagagggtctcccgtgccccctcac
accgcccccaacggtaccatgaccacagagcaggagacgaagacaccgtccagcccgagt
cgctctttcctcagccaccacatgtcagctctgggtctgagcaggaagtccaggctcttc
tccaaaaccagctccatctctgaggagccttcagccgcctgcagctcgccctcctccccc
tccgacgcctctctccaggagaagtcgtcccagtcgaacccagagcagtcgggaaccaag
acagagactaaaaccggtttcaactctggggaggccgactggctcttctgcccagatgac
tgtaatgtaaatcaggacaagccggttctgaagaggtttgaaggtaatttccttcgtaac
ctggcagccacacagtgggagaagaagagaaggagtaaacacctcagccagtccaggctg
tcctcgtctgatgacctcataaccccgggcccacagctaacagcggaggagggcaggggc
gtcccagctgcagagacgtcgcttcacacatccagcagttcagacccaaacggactctca
gactcccagaatgacccagcagcagcatcgtctgtgcagcgtcagtgcagcacgctttct
aacgacaagaagttcctgctggacatgctctactccaagacggccgccgcagcgcctctg
agcccgacggccgctgctcccgacaccaccgaggaagaagggaacttccagtctggtggt
ggagatctgggtggacggggtcgtgtgttggagcgtctgtccagcttcaaagcacgctcg
gcggagtcctccggctccagtgagagcagcgcctctcgcagggcggagctggaggggctg
gaaggctccgcccaggcagcactggccagactggctgaagaacggcagcagaaccgtcac
ctccggcagcagagcagcatcgatgtggagagccacgcccgccgcctggagacgacccag
atgaccccgctgggccctgggggccccactgacgcctgggaccagctgcagccaagcgcc
gccgcactgcgcatcaaagacctggacttctccgacctgttggacgaggaggacatcgac
gtcttggacatggacaccttcgactcctcttcctcctcctcctgcttctctggcatccct
ccccctcctcctcctcccccaggcctggctggtggtcctcctcctcctcctcctcctccc
ccacctcctccacccggcggtctggctcctccaccacctcctccccctccaccaggcgct
cctcctcctcccctcttctcgtcctcagcagcggcggtgttcgctcagaagaagaagaag
acggtgaagctgttctggaaggagctgaagcaggcggacagacctcagaagtgtcgcttc
ggtcgggggacggtgtgggcgtctctggacaaggtggctgtggacactgcccgactcgaa
cacctgtttgagtctaaggccaaggagctccccgttgccaagaaaggacctgagatgaaa
aagtcagagattctggttctggatccaaagaggagcaacgccatcaacattggtatgact
gtgctgccagccgtccacgtcatcaagactgccatcctcaacttcgacgagtttgccatc
agcaaggaggggatagagaagatcctgaccatgacccccacagaggaggagaagcagaag
atccaggaggctcagctggccaatcctgacgtccctctgggcacggcggagcagttcctg
ttcagcctggcctccatcagcgccctgaccccccgcctccagctctgggcctttaaactc
aactacgaggctctggagaaggagatcgcagagccgctgtttgacctgaagctgggcatg
gagcagctggcctccaatcagaccttcaggagaatcctggcgacgctactcgccatcgga
aacttcctcaacagctccaacgctaaaggctttgagctgggttacctggagaaggtggtg
gaggtgaaggatacagttcaccgtcagtctctcctgcatcacacctgcaacctggtggtg
gaaaattacccagaatcctcggacgtctactctgaaattcccgccatcacccgctccgcc
aaagtggactttgagctgctctcagagaacctggtccagctggaacgacgctgcaaagca
tcatgggacaacctgaaggtggtggccaagcatgaaaccaaagctgtgctgaagaacaag
atgacggacttcctgaaggactgcacacagaggatcatcatcctgaaggttgtccacagg
agggtcatcaacaggttccactccttcctgctgttcctgggtcagccgtcctcctcggtc
agagacatcaaagtcaccagtttctgtcggatcatcagtgagttcgcgctcgagtatcgc
accaccagagagcgagtcctcaccctcaaacgaaaacgagccgctcaccgagagagaacc
aagaccaggggcaagatgatcaccgagacggagaagttttcgggagcggtgcctcgtcca
gacagtccctccccagtctcccaggcggcggaggcagatgcgggtcaggaggaggaacac
gagaacatgaagaacctgctgatcagcaacaacaacagtctcagtgctgaccatagaggc
ctgagacgctccagagccgtccgcagtatgggcagggtgagtccgtctcagatgactata
gccaaagaggacgggaccagctcccaggatgacgccacagatgagatcatggaccgactg
gttaaatccgttacccagaatccgtcagacagagcatccagtcccaagacccgaaagcgg
tccagactcaacaggaagtcattgaggaggactctgaagagcggtctcagtctggacgtg
gttcaggctctgggactcaataacaagaccggagacaaagtctga
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