Lates calcarifer (barramundi perch): 108894226
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Entry
108894226 CDS
T04895
Name
(RefSeq) transcription termination factor 1
KO
K15225
transcription termination factor 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcf03021
]
108894226
Transcription machinery [BR:
lcf03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
108894226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
108894226
NCBI-ProteinID:
XP_018548331
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MNPTADSFCPSPQKRRRSESLEESPPPVDTTERTERKKKKKKRRQEEEEVSPPLPPPPAV
GETNRENEKKKKKKGKEKQEEGGAEEEVELETSETEKKKKKKKKKKQKNGLSEVNIVMLT
DHSNRETDAMVSMETNNIRTEKKKKTKKIEERRMRGGGKERERERAAVKHDECDGEQELQ
ELQEFIPDVRKKSVGQISKLLRYDLQRFKNFKQQGVSLRWGRYSKQENQQIRKNISDFLA
LTGISSANQLLFPQRYKEQEAEIKKLRVQHHFLERIAEGIPRTCDQVYVRARKIFDDRNH
RGRFSEEELHSLVKLQNLHGNDWKTIAQKMERSIYALEKRFANIAEGHGSWSSDEESRLK
VALKAHLEAVVQQSPTGPRLTRDQLWNNLPWKEISQQVGTRSWTQCRLKWFSILKVKLSS
GGSTFNRGSEGLQAKINLINTLYNMRVDDAGDIDWDEVALSVGKTTPVCVQKSFHRLKVS
RVPDWARLSYGEIIDFLQQREVPLLKKKLSQFNRREVQHEQQEEEMYLLSDIFTSQDEED
FQEVDNSQLTFSQSGHRRM
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctactgcagactccttctgtccctcccctcagaagaggaggaggtcagaaagt
ctggaggaatctcctcctcctgtcgacacaactgagagaacagagaggaagaagaagaag
aagaagaggagacaagaggaggaggaggtgagtcctcctcttcctcctcctcctgctgtt
ggagagacaaacagagagaatgaaaaaaagaagaagaagaagggaaaggagaagcaggag
gagggaggagcagaggaggaggtggagttagaaacaagtgagactgaaaaaaagaagaag
aagaagaagaagaagaaacagaagaatggactgagtgaggtcaacatcgtcatgttaaca
gaccacagcaacagagaaacagatgccatggtttccatggaaaccaacaacatcaggact
gagaagaagaagaaaactaagaaaatagaggagaggaggatgagaggaggagggaaggag
agagagagagaaagagcagctgtgaaacatgatgagtgtgacggggaacaggagctgcag
gagctgcaggagttcatcccagacgtcaggaagaaatcagtcggtcagatcagtaaactg
ctgagatatgacctgcaacgcttcaagaacttcaaacagcaaggtgtatctctgcgttgg
gggcggtactctaaacaggagaatcagcaaatcagaaagaacatttcagacttcctggct
ctgacaggcatcagctcggccaatcagcttctgtttcctcagagatacaaagagcaggag
gcggagatcaagaagctgagagtacaacatcacttcctggagaggatcgctgagggaatc
cctcggacgtgtgatcaagtttatgtcagagccaggaagatttttgacgacaggaaccac
aggggaaggttctcggaggaggagttgcattctctggttaagttgcaaaaccttcatggt
aacgactggaagacgattgctcagaagatggaacgcagcatctacgccttagagaaacgc
ttcgccaacatcgctgagggtcatggatcctggagttcagatgaagagtccaggttgaag
gtggctctgaaggctcacctggaggccgtggtccaacagagtcctacaggtcctcgtctg
accagggaccagctgtggaacaacctaccctggaaggagatcagtcagcaggttggaacc
agatcctggacccagtgtcgcctcaagtggttctccatcctaaaggtgaaactgtcctca
ggtggcagcaccttcaacagaggaagtgaaggacttcaggctaaaatcaatctcatcaac
acgttgtacaacatgcgtgtagacgatgcaggcgacattgactgggacgaggtcgctctg
agtgtcggtaaaacaactccagtgtgtgttcagaagagtttccacagactgaaggtttcc
agagttcctgactgggccaggttatcatatggagaaattattgacttcctgcagcagagg
gaggtacctctcctgaagaagaaattgagtcagttcaacagacgggaggtgcagcacgag
cagcaggaagaggagatgtacctgctgtctgacatcttcacctctcaggatgaggaggac
tttcaggaagtggacaacagtcagctgacattcagccagtcaggacacagaaggatgtaa
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