Lates calcarifer (barramundi perch): 108894252
Help
Entry
108894252 CDS
T04895
Name
(RefSeq) zinc finger protein 536 isoform X1
KO
K27242
zinc finger protein 536
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108894252
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108894252
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_assoc
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-H2C2_5
zf-C2H2_15
zf-Di19
zf-C2H2_7th_ZNF462
zf-C2HE
zf-C2H2_16
DUF7838
zf-C2H2_6
HSD3
Zf-C2H2_ZNF451
Motif
Other DBs
NCBI-GeneID:
108894252
NCBI-ProteinID:
XP_018548374
UniProt:
A0A4W6D785
LinkDB
All DBs
Position
LG2:16515207..16734321
Genome browser
AA seq
1506 aa
AA seq
DB search
MEDSSLCLGVSSAVPDADAHLSSAVLNGRYPISQKLHQLTAQLGHAFPDLHRPQQIPEEK
AATPLDEKTHHAALASQPISSQMALLANQLNRDIDAGALSGLNGRVDLQQFLNGQNLGIM
SQMNDIEDDARKNRKYPCPLCGKRFRFNSILSLHMRTHTGEKPFKCPYCDHRAAQKGNLK
IHLRTHKLGNLGKGRGRVREENRLLHELEERAILRDKQMRGSGSLLQTPQTPHLGLNSSS
NTHQQQLGSACGLLPPSGLATSDTISQPSSSPKPASTQDEQSLNPTTGFRCTFCKGKFKK
REELDRHIRILHKPYKCTLCEFAASHEEELISHVEKAHITAETTQGQGAGGAGGMQMATE
FRCDVCGQVFSQAWFLKGHMRKHKDSFEHCCQICGRRFKEPWFLKNHMKVHLNKLAIKSK
PPQPSEQDMAAVNSMSNLAQEAHANLYSRYISCLQGGFLSPDKQGLSEQHQMLAKAGIAM
KEKEMLGKLLGPMAGGMGHGLGENEKRSLLGCLNLVPPLKSSCMERLQAAAKVAEMDSLS
SYQAWQIMARGMAMERAFMPKEQQQHQHHIPPGQEDEMGGAGALASFSKDKQDYSLISSN
DSSKQKQLSEALQGSKASSGAMMSMKEDGRGFDSHRDLMSHHGNAEASGALAGLGSPNID
YSLSSLSGLKEKPSECPDCGRIFRTYHQMVVHSRIHGKDRRGIEEALQQQGLDERRGSAS
DPESQSISRSTTPGSSNVTEESGAGGGHSQTGSVQDDSPHPSSPSSDVGEDLGKAAGNIQ
PPLSQHRERSLGSSSKDCPYCGKSFRTSHHLKVHLRIHTGEKPYRCPHCDYAGTQSASLK
YHLERHHRERQNGSTTSAPSSGHTPSSDHKEDHGKTAGGGVFARPDVLRNVFKGMPPNLD
FRAGPLLPHQWASAGMMSAHDRDRERADRRFDSASSAENMKTADGASSLVSTATDSPASF
SDLSRAYQSMMGNGVHFQGSLQAFMDSFVLSSMKKDMKDNQSSSQLQAQLYHDNGEPKAK
RAISVDQEREDKAEAKQNSEPGKPGSQYEPLDLSVSVRPESASGSLPGSSVTIHDNVAWH
GCLFCSFSTSSFELMALHLQANHLGKAQLQRSDASKELHGETSPTTSTIHSSNTKTSGGP
LDKDGDRDGEKSQGGWNNHMDQPYNPFQSDFYRRFGGLYDGSPRAHHGLQGYIAPAEQGL
DLPSQAFGGASSARDDQIGERGSRGDAEEDQVGSDEEVVKAGAHSASETPSTTPKRQQQQ
NHSDEEEEEGGVAEEEEERDEDGQMDMEREEEGSPASDHLQNHSKNLQDNSPLPPRSGAG
LASSSTMTPLSLVSQPQNQALPLEKQWQQGLGLLSPGGPPGLLKAEQQTHLEQQMNMLSV
LRAYSNDNIPAFNGLGGGAGGAPTGGMKRPDAPGQRPFKCSYCPYSASQKGNLKTHVLCV
HRMPFDNTQYPDRRFKRSRPESDSPDKSPTYAVGGFASNQPVTEVDVSHGSNFVPFAREA
SPCHQE
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atggaggactctagtttgtgtcttggtgtgtcgtcagcggtgcctgatgctgatgcccat
ctgagcagtgcagtcttgaatggccgctaccccataagtcaaaagcttcaccagcttact
gcccagctaggacacgcctttcctgacctacaccgcccacaacagatccctgaagagaaa
gcagccacgcctttggacgagaaaacccatcacgcagccctggctagtcaacctattagc
agtcagatggccctactagccaatcagctcaaccgagacattgatgcaggggcactaagt
gggctgaacgggcgagttgacctgcagcagtttctcaatggccagaatttgggcatcatg
tcccagatgaatgatattgaagatgacgcccgtaagaataggaagtatccctgtccattg
tgtggcaagcgcttccgttttaacagcatcttgtcgctgcacatgcgcacacacacagga
gagaagcccttcaagtgtccctactgtgaccaccgagcggctcaaaagggcaacttgaag
atccacctccgcacccataaactggggaatcttggtaagggccgcggccgtgtcagagag
gagaataggctgttgcacgagttggaggagagggccattctgagggacaagcagatgaga
gggagtggtagtctcctccagacacctcaaacaccccacctgggcctcaacagcagctct
aatacccatcagcagcaactaggatcagcctgtggcctccttcccccctctggccttgcc
acttcagacacaatttcccagccctcttcttcacccaagccagcaagcacccaggatgaa
cagtccctgaacccaactacaggcttccgttgtaccttctgcaaggggaagttcaagaag
cgtgaggagctggaccgccacattcgcatactccacaagccctacaaatgtaccctgtgt
gagtttgctgcctcccatgaagaggagctgataagtcatgtggaaaaggcccacatcaca
gcagaaaccacacaaggccagggtgctggtggtgctggcggaatgcagatggccaccgaa
ttccgttgtgacgtgtgtggacaggtgttcagccaagcttggttcctcaaaggccacatg
cgcaagcacaaggactcctttgaacactgctgccaaatttgtggccgtcgtttcaaggaa
ccttggtttctcaagaaccatatgaaggtacacctcaacaagttggccatcaagagcaag
ccaccccagcccagtgagcaggacatggctgctgtcaatagcatgagcaatctggctcag
gaagctcacgccaacctttattcccgctacatctcctgtcttcagggaggcttcctttca
ccagacaaacagggcctgagtgagcagcaccagatgttggctaaagcagggatagccatg
aaggaaaaagagatgttaggaaagctgctggggccaatggcaggaggtatgggccatggg
ctaggtgaaaacgagaagcgctcactcctgggttgtctaaaccttgtgccaccactcaag
tcaagctgtatggagcgcctgcaggcagctgcaaaagtggcagagatggattccctcagt
agctaccaagcctggcagataatggctcgtggcatggctatggaaagggctttcatgcct
aaggagcagcagcagcaccagcatcatatacccccaggacaggaagatgagatgggtggt
gctggggctttggcttctttctcaaaggataaacaagactactccttgatttcttccaat
gatagctccaagcagaagcagctctcggaggccttgcaggggtccaaggcctctagcgga
gccatgatgtccatgaaggaggatggaagaggttttgacagtcaccgtgacttgatgtct
caccatggtaatgctgaggcctctggagccctggctggcctgggaagcccaaacattgac
tacagcctctctagcctctctggcctaaaggagaaaccttcagagtgccctgactgtggc
cggatcttcagaacctaccatcagatggtagtccactcccgcatccatggcaaagacagg
agaggcatcgaggaagcgctccagcaacaaggtctggacgaacgccgtggatcagccagt
gacccagagtcccagtccatcagccgctcgaccactcctggttcatccaatgtgacagaa
gagagtggagctggaggaggacactcccagacaggaagcgtccaggatgatagcccacat
ccctcctcaccatcttcagatgttggggaagacttggggaaggcagcggggaatattcag
ccgcctctgtcccagcatcgtgagcgcagtctgggctcatcctccaaggattgcccctat
tgtggcaagtccttccgcacctcccatcatctcaaagttcatctgcggatacacacagga
gagaaaccctaccggtgccctcattgtgactatgccggcacacagtctgccagtttgaag
taccacctggagcgccaccaccgtgagcgtcaaaatggctctaccacctcagccccatcc
tctggccacaccccttcttctgaccacaaagaggatcatgggaagacagccggcggtggc
gtctttgcccgaccagatgtcctccggaatgttttcaagggaatgcctcccaacctagac
ttcagggcaggtccattgctgccacatcagtgggcgtcggctggcatgatgtccgcgcat
gacagagatcgtgagcgcgcagaccgtcgttttgactctgcctcctcagctgagaacatg
aagactgctgatggcgcatcctcccttgtctcaacagcgacagatagtcctgccagcttc
tctgacctaagcagggcttaccaaagcatgatgggaaatggagtccactttcaaggttct
cttcaggctttcatggacagctttgtcctcagctccatgaagaaggatatgaaggacaac
cagagttcaagccagctccaggcccagctctaccatgataacggtgagcccaaagccaag
cgggccatctcagttgaccaggagagagaggataaggctgaggccaaacagaactcagag
cctggcaaacctgggtcacagtatgaaccacttgatctatctgtgtcagtccggcctgag
tctgcatctggatctcttcctggctcctcagtcaccatccatgataatgtggcgtggcat
ggctgtctcttctgctccttctccacctcctcattcgagctcatggctctgcacctccag
gccaaccacctgggcaaggcccagctgcagcggtctgatgcaagcaaggagcttcatgga
gagacttctcccaccacttccaccattcactcctccaacaccaagacctctggtgggccc
cttgacaaagatggagacagagatggagaaaaaagccagggaggctggaacaaccacatg
gaccagccctacaaccctttccagagtgacttctacagacgatttggtggcttgtatgat
ggatcaccaagggcccatcatggccttcaagggtatatagccccagcagagcaaggtctg
gacctacctagccaggcttttggaggagcatcttcagccagggatgaccagattggtgaa
aggggctcccgtggagatgctgaagaggaccaggtaggatcagatgaagaggttgtaaag
gctggggcgcacagcgccagtgagaccccctcaaccacccccaaaagacagcagcagcag
aatcactccgatgaagaggaagaggagggaggagtggctgaagaggaggaggaaagagat
gaggatgggcaaatggacatggaaagagaggaagagggaagtccagcttcagaccacctc
caaaaccactccaaaaatcttcaagacaactcccctttgcccccaaggagtggagctggt
ttggcatcttcctctaccatgacaccactttcgctggtttcccaaccccagaaccaagct
ttgccactggagaagcagtggcagcagggcctgggcctcctgtctcccggaggtcctcca
ggactgttgaaggctgagcagcagacccacctagagcagcagatgaacatgctgtctgtc
cttagagcctacagcaatgacaacatccctgcattcaacggcctgggaggtggagcagga
ggagcacccacaggaggcatgaagaggccagatgcacccggccagagaccattcaagtgc
agttactgcccctacagtgcctcccaaaagggcaacctgaagacccacgtgctgtgcgtg
caccgcatgcccttcgacaacacccagtaccctgaccgacgcttcaaacgctcccgtccc
gagtccgacagcccagataagagccccacctatgccgtcggtggctttgcatctaatcaa
ccagtgacagaagtagatgtaagccatgggagtaactttgtgccatttgccagggaggcc
tcaccttgtcaccaggagtga
DBGET
integrated database retrieval system
