Lates calcarifer (barramundi perch): 108894381
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Entry
108894381 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: golgin subfamily A member 4
KO
K20283
golgin subfamily A member 4
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108894381
Membrane trafficking [BR:
lcf04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
108894381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GRIP
Motif
Other DBs
NCBI-GeneID:
108894381
NCBI-ProteinID:
XP_018548531
UniProt:
A0AAJ7Q7A8
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All DBs
Position
LG16_LG22:complement(5179561..5202035)
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AA seq
2130 aa
AA seq
DB search
MFKKLKQRINEEQSPQRNAQSPQQAQMGPGDRRSSQTPPFHHDGSPSPSDREMLAGMIAE
PAFLSEYTIFALDHSKRPKTAQVASVGASKGPARSPRGSINGDGSVSPLREEPQSFAQKL
QLKVPSMESLIRGGASRAENLFRSPSKENLVRSPSRDSLTPLGENETPGAPTYDPPSDIE
SEAEEPPGSAESLSKEQLLHRLLRVERSLGKYRGKYSELVTAYRTVQRDKEKTQAILSQS
QDKALRRIGELREELQMDQQAKKHLQDEFDAALEEKDQMITVLQTQVALLKKRVKGVSDG
ALPPEGDIPQSDDTADPTSATQSPSKGQGVESEVTEGEGNSDPTKLMEALQKRVKRQENL
LQKCKEMMRTHKERSAQLGSENETLQEQLQERLQELEKMKELHTTEKTKLITQLRDAKNL
IEQLEQDKGMVIAETKRQMHETLEMKEEEIAQLRSRLQQATAQKEELQDQKEKAEKSAFE
ELERALGVAQRAEEARKQLQVQLEEHVTQVEKASEEERKSLQQELTRVKQEVVTIMKKSS
EETVAGLEKLHSEALAAKEAEISDRINKAVEQCKEEFAQLAKEREQQASLALEDAELQKT
ALRTEADTKVKEIQLELESARTRILELESSLEKISQDGSSLSHELSSQLGELKDKHKQQI
SALEEKHQEQLEKHKVSLTQQHDAAIEELKEKHRAEVETLLKDKELQFQAHIEDMNQKTL
EKLDAKQAELEALSSELSEALTNKKLLEEKLVAAEEAQSLAHKEHEKSFQDQVAKHNVEL
ANIKQEHEQSLGGIEKTLKEELNALKIVLREREKEIQEHILREKTLQEESHSTVQELNVK
VKEVEELQQSLSQSQVENGSLKESSAQLSKISEDLDQCKKDLTDLEHQLEVAKNDCQQKE
KSLQELEQQLQQTKKELSEQEKSFNAELSSKQEEQTRLKKQLEDEKAAHEKKLKNTKTEL
ENKLKTQETKMEKFKQKAKEMQENFKKKLQQNEENMKKELAKKETELQQKEQQVQEKILE
MAQKSSQGLSSAMSELQANHKEEVEKLHETHKHEIEELERRWQEKLEQQEEEIMEKHSLT
LQEKAQELEELSQQLGRSRDENEQIMCEIKNLKEDLAIRETTVQKLQEELNEAAVKLESL
SQGEALLKEQMESVERNLNQAMNERNALQDKLTTTEEESREKLKTLSDKLEETEKHLRAV
EGSRFKENENLQSKVEETAIQLQAKEAEFQQKLIMISNQMEHYCKEVQSKVECGSNELSQ
RVECKVKELKDRLLCSQKKVGHLRNIILTKVDRICTLEATLHQQTEENKNLCISLEQMTA
QVNAHTEHIKALIHEKENHSQSISEKAQKIEELSEANRIISDSMKTNEKHISDLESIISD
LKNKLASSIEEKEEAINQLNQQYKEEGQQAALQMKETIERLEQERKSALEQADELRNSLS
EYENKAETKLAQNDNTIASLHIRLGELEQEISEKNEALQRLTASIDNQSISKSEMDQVLS
EKEQKVSGLTSELESCISRLSELQEQLALKTKECEQLTADLKQQHSIRESEKRELVEQLQ
QTQMQCAQNGNLEQEMVSKLHSLKEDNQKCKRELESQKEEFERMKDEIIKSKEESLKATE
EKLSAESARKVSELKKKAEQKIGQIKKQLTSQLEEKEQTIKALQTSLEEIKSSETSRNQH
IETLEERAKTLEEALVKLKEEQEKQLEQSLSNERLEKEKSVEELKNMYEEKLSLLQKDAA
EQGQLKETKSVLHEIEAKLKEAEEQNGNLLAEIDRLKEEIREKEAQLDQHQATIKQVQNQ
SVVEAEMKVECRSVQQTMSVMENEMENHSPMEEVSSDSLESLKSKLSQVKNEKEKIHKDF
IRLQKDIRSLRKEHEQDLEYMKKELLEEKEKKLKLELEDMEMKHNSAIKQLMREFNTQMA
LKERELDTAVKEAIAKAQSVEAELISSHREEASQLRKVIAQKEDDLHRTVQKYEQVIQSR
EEEMGDRVWQVQKELEELQTKTHGASEAQMSTEELQAQLAEKTTLLSEARLKEQEFVERI
HSLEDKIKCFHRNTVVTHLGSTFKDPGFNSTDSLSEPTEMEYLRKVLFEYMMGRETKTMA
KVITSMLKFPPDQAQKVLDKEDSKTIPWLR
NT seq
6393 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaaactgaagcagaggataaacgaggagcagtcaccgcaaaggaatgcgcag
tcaccacagcaggcccagatgggccctggtgaccggcgcagcagccaaacccccccattt
catcatgatggttcaccctctcccagtgacagagagatgctggctgggatgatagcagag
cccgcttttctctctgagtatactatctttgctctggaccattcaaaacgacccaaaacg
gcccaggtagccagtgtgggtgcctctaaaggaccagctaggtctccaagaggtagcatc
aatggcgatggaagtgtttctcctcttagagaggagccacagtcatttgcccagaaactg
caattaaaagttccctcaatggagtcgttgattcgtgggggtgccagtcgtgcagaaaat
ctgttccgctctccctcgaaagagaacctggtccggagcccatcgcgcgactctctcaca
cctttgggagaaaacgagacccctggtgccccaacatatgatcccccctcagatattgag
agtgaggctgaggagccaccaggaagtgcagagtccctgtccaaagagcagctgttgcac
cgactccttcgagtggaaaggagtctggggaagtacagagggaagtactcagagctggtg
actgcgtaccgaacagtacaacgagataaagaaaaaacgcaggctatcctcagtcagagt
caagacaaggctctccgcaggataggggagctgcgggaggagcttcaaatggaccagcag
gctaagaaacacctacaggacgagtttgatgctgcactggaggagaaagaccagatgatc
actgtcctccaaacacaggttgctctgttgaagaaacgagttaagggggtctctgatggt
gctctgccacctgagggtgacatccctcagtctgatgatactgcagaccctacttctgcc
actcagagtccttccaagggccaaggagtagagtctgaagtcactgagggagagggcaac
agtgatccaaccaaactcatggaagctctgcagaagcgagtgaagaggcaggaaaacctt
ctgcagaagtgcaaagaaatgatgcgtacacacaaggagaggagcgcccagctgggcagt
gagaatgaaactctgcaggagcagctgcaggagagactgcaggagctggagaagatgaag
gaactgcacacaacagagaagactaagttgatcactcagctgcgtgatgccaagaatctc
attgaacagctggagcaggacaagggaatggttattgctgagacaaagcgccagatgcat
gagacactggaaatgaaagaagaggagattgcacagctacgctccaggctccagcaggcc
actgcccagaaagaagaattgcaggatcagaaagaaaaggctgagaaatcagcatttgaa
gaacttgaacgggcgctgggtgtagctcagagggcggaggaggcccgaaagcagctgcag
gttcagctagaggagcatgtgacacaagttgaaaaggccagtgaggaagagaggaagagt
ctgcagcaggagctcacacgagtcaaacaggaggtggtcactatcatgaagaaatcatca
gaggaaacagtggctggtttggaaaaactccacagtgaagctctggctgctaaagaagca
gagataagtgacaggatcaacaaagctgtggagcaatgtaaagaggagtttgcccagtta
gccaaggagcgagaacagcaggcctctctggctctggaggatgcagagttacagaagaca
gctctgaggacagaagctgataccaaggttaaagagatacagctggagctggaatctgca
aggactagaatattggagctagagagctctctggagaagatctcacaagatggatcaagt
ctgtcccatgaactttctagtcagctgggcgagctgaaggataaacacaaacagcaaatc
tctgcattagaggaaaagcaccaggagcagctggaaaagcacaaggtcagccttacccag
caacatgatgctgctattgaggagctcaaggaaaaacacagagctgaagtggagaccctg
ctgaaggacaaagagctgcagttccaagcacacattgaagacatgaaccagaaaacatta
gagaaactggacgcaaagcaggcagaattagaggctctttcctctgaactctctgaggct
ttgacaaataaaaagcttctggaggagaagttggtggcagctgaagaggctcaaagttta
gctcacaaggagcatgagaagagtttccaggatcaggtggcaaagcacaatgtagaactt
gcaaacatcaaacaggagcatgagcaatcacttggagggatagagaaaactctcaaggag
gaacttaatgcattgaagattgttctgagggagagggagaaggaaattcaagaacatatt
cttagagaaaaaacactacaggaggaatcacattccactgtgcaggagctaaatgtcaag
gttaaggaagtagaagagctgcagcagagtttatcacaatcccaggtggaaaatgggagc
ctaaaggagtctagcgcacagttaagtaagatctcagaggatctcgatcagtgtaagaaa
gatttgacagatttggagcatcagttggaagttgcaaagaatgattgtcaacaaaaagag
aagtcacttcaagaactggagcagcaattacaacagaccaaaaaggagctctcagagcag
gagaagtcatttaacgcagaactgagcagcaagcaggaagaacagacacggctcaagaaa
cagctggaagatgaaaaagctgctcatgagaagaagctgaaaaacactaaaactgagctg
gaaaataagctgaaaacacaagaaacaaaaatggaaaagttcaagcagaaggccaaagaa
atgcaggagaattttaagaaaaagcttcagcagaatgaagaaaacatgaagaaggaactt
gcaaagaaggagacagagcttcagcagaaggagcaacaagttcaagagaaaattcttgag
atggcccaaaaaagctcccaaggcctcagcagtgcaatgtcagagctgcaggccaaccat
aaggaagaagtagagaagctacatgagactcataaacatgagattgaggagctggagcgg
cgctggcaggagaagttagagcagcaggaagaggaaataatggagaaacattcactcaca
ctacaagagaaggcacaggaactggaggaattatctcagcagcttggcagaagcagagat
gagaatgagcaaataatgtgtgaaataaagaatttaaaggaggacctggcaattcgagaa
accactgtgcagaagctgcaagaagagcttaacgaagcagcagttaagcttgaaagtttg
tctcagggtgaagcattgctgaaagagcaaatggagtcagtggagaggaaccttaaccag
gctatgaacgagagaaatgccctccaagacaagctgaccacaacagaggaagagagcagg
gagaagttaaagacattgtcagataagttggaggaaacagagaagcatctcagagcagtg
gagggttccagatttaaagaaaatgagaacttgcagagtaaagttgaggaaactgccatt
cagttacaggccaaggaagcagaatttcagcagaaattaattatgatcagcaaccaaatg
gagcattactgtaaggaggttcagtctaaagttgagtgtggatctaatgaactcagtcaa
agagttgaatgtaaggtgaaagagctgaaagatagactgctctgtagtcagaagaaggta
gggcatctcagaaacattatccttactaaagtagatagaatttgcactttagaggccact
ctccaccagcagacggaggagaataagaatctatgcatttcgttagaacagatgactgct
caggtaaatgctcatacagagcatatcaaagccttaattcacgagaaggagaatcattct
cagtctatcagtgaaaaagctcagaaaattgaggagctgagtgaagcaaaccgaatcata
tcagatagtatgaagacaaatgagaagcatatcagtgacttggaaagcatcatcagtgac
ttgaaaaacaagttagcaagtagcatagaagagaaggaggaagccataaatcagctgaac
cagcagtataaagaggagggacaacaggctgctcttcagatgaaggagaccatcgagaga
ttagagcaggagagaaagtctgcattagagcaggcagatgaactcaggaacagcctgtct
gagtacgagaacaaggcagagacaaagctcgcccagaatgacaacactattgcatctcta
cacatcaggcttggagagctagagcaagaaatctctgaaaagaatgaagccctgcaaagg
ctgacagcaagtattgacaatcagtccatcagcaagtctgagatggaccaggtgttgagt
gagaaggagcagaaagtcagcggacttacctcggagctggagagctgcatcagtcgactc
agtgagcttcaggagcagttagccttaaagacaaaagagtgtgaacaactcacagctgac
ctcaaacagcagcacagcatcagggagagtgaaaaaagagagctggtagagcagctgcag
cagacccagatgcagtgcgctcagaatggtaacttagagcaggagatggtcagtaaactg
cactccctcaaggaagacaaccaaaagtgtaaacgtgagctcgaaagccaaaaggaggaa
tttgaaaggatgaaagatgaaattatcaaaagcaaggaggagagtctgaaggcaactgaa
gagaagttatctgcagagagtgctcggaaagtatcagagctgaagaagaaagctgagcag
aaaattggtcagattaaaaaacagctgacttcgcagcttgaggagaaggaacagacgatc
aaggctcttcagactagcttggaggaaatcaagagcagtgaaacatccagaaatcaacac
attgaaacattagaggagagagcaaaaacacttgaggaagctcttgtcaagcttaaagag
gagcaagagaaacaacttgaacagagtctgagtaatgagagacttgagaaagaaaagtct
gtagaagaactgaaaaacatgtatgaagagaagctgtccttacttcagaaagatgcagca
gaacaagggcagctcaaagagaccaaatcagtgctacatgaaatagaggcaaagctaaaa
gaagcagaagagcagaatggaaaccttcttgcagaaatagatcgtctgaaagaagaaata
cgggagaaggaagcccagcttgatcaacatcaggcaactatcaagcaggtccaaaatcag
tcagtagttgaggctgagatgaaggtggaatgtcgcagcgtacaacaaaccatgagcgtg
atggaaaatgagatggaaaaccactctccgatggaagaagtgagcagtgattctctggag
tctctaaagagcaaactgagtcaggtgaagaacgagaaagagaaaatccacaaggacttc
atcaggttacagaaagacatccgatcactgagaaaggagcatgaacaggacctagaatat
atgaagaaagaattattagaggagaaggagaaaaagctgaaactggagttggaagatatg
gaaatgaagcacaattctgctatcaagcagctgatgagggagttcaacacacaaatggct
ttgaaagagagagagcttgatacagcagtgaaggaagccattgcgaaggcccagagtgtt
gaagcagagctcatcagtagccatcgtgaagaagccagtcagctgaggaaggtgattgct
cagaaggaggatgatttgcacagaactgttcagaaatatgaacaggttattcagagtcga
gaagaggagatgggagacagagtgtggcaggttcagaaggaattggaggagctgcaaaca
aagacccatggcgcttctgaggcacagatgagcacagaagaactacaggctcaacttgct
gagaagacaactttgctgagcgaggctcggctgaaggagcaggagtttgttgagagaatt
cactcgcttgaggacaagattaaatgtttccaccgaaacactgttgtaactcatcttggg
agcacattcaaagatccaggattcaacagcactgattcactctcagagcccactgagatg
gagtatctgaggaaggtgttgtttgaatacatgatgggacgggaaacaaaaacaatggcc
aaagtgataacctccatgctcaagtttcctccagaccaagcgcaaaaggttttggacaaa
gaagactcaaaaacgattccttggttacgatga
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integrated database retrieval system