KEGG   Lates calcarifer (barramundi perch): 108894382
Entry
108894382         CDS       T04895                                 
Name
(RefSeq) integrin alpha-9 isoform X1
  KO
K06585  integrin alpha 9
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04510  Focal adhesion
lcf04512  ECM-receptor interaction
lcf04514  Cell adhesion molecules
lcf04810  Regulation of actin cytoskeleton
lcf04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    108894382
   04514 Cell adhesion molecules
    108894382
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108894382
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    108894382
   04810 Regulation of actin cytoskeleton
    108894382
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:lcf04515]
    108894382
Cell adhesion molecules [BR:lcf04515]
 Integrins
  Integrin alpha subunits
   108894382
SSDB
Motif
Pfam: Integrin_A_Ig_1 Integrin_A_Ig_2 FG-GAP Integrin_A_Ig_3 FG-GAP_3 Integrin_alpha
Other DBs
NCBI-GeneID: 108894382
NCBI-ProteinID: XP_018548533
UniProt: A0AAJ7VDP0
LinkDB
Position
LG16_LG22:complement(5133587..5179454)
AA seq 1031 aa
MMRKRMAPLQRHKTGVQNVFYVCLSISVAYSYNIDLEHPLVFRGPNSSFFGYSVLEHYHD
NTRWVIVGAPRANSTYSSSVHSPGAVYKCRVHSNPERRCTEMDLGRGNKPRESCGKTCQG
DRADEWMGVSLARQDRANGKILACAHRWKNVYYDSEHILPHGYCSIIPPTLQGRTKPLIP
CYEDYKQKYGEEHGSCQAGIAGVFTEELVVMGAPGSYYWTGTIKVYNLTSDSFYSPNKED
VDSHRYSYLGYAVTAGHFSSPNVIDIAAGAPQHSGSGKVYIFKIDGVSLVKSFQASGKMM
GSYFGSSLCAVDLNQDGLSDLLVGAPMHSQLRDEGQVSVYLSKGNGVMEEAGVLTGDSAF
NAHFGECITAIGDLDDDGYQDVAIGAPKEDDYGGAVYIYHGDATGIINKYSMKLSGRSIN
PGLQMFGQSISGNVDMDGNGYADVTIGAFMADSVVLLRSRPVITVDVSIFLPVSINITVP
QCHEGNQNQNCFNVTVCMRFRGRQLPGQIELLYNLTADVDKRQKSQPSRIYFIQSGSQIS
QMSQQFSLEINREECQRYTAYVKKDVKDVFTTIAFEAAYSLGKHVLTGHQDRDLPALTPV
LRWRKGNKIAVRNETWFEKNCLSDDCAADLRLHGKLLLSGLHTRPHLALGGVRNVSLNLT
ISNTGDDAYDTNIYFNFSREVFYINFWQKEEKGISCELVDLDFLKCSVGFPFMRAQTKYH
FAVIFDTSQLSGENDTLQFLVQAKSANPEHKLSDNSLDLSIPLVHETDTTITGVVTPTSF
VYGNSIDASRFVQLEDMECNFQPLNLTFQAINKGPSRLPGSTVDIRIPNRLAGSGADMFH
IIETQVADGRGNCTPHRNPTPCTIPQEKESIFHSIFAFFTKSGRKVLDCDRPGRACMTIS
CSLGPQLKEEALSIDIKLLLNTEILKRDSSSVIQFVTRGSVQVNDRAVEVPKGLPEDISL
VFEALHSQEPRGYVVGWIIAISLLVGILIFLLLAVLLWKMGFFRRRYREIIEAEKNRKDS
DESWDWMEKNH
NT seq 3096 nt   +upstreamnt  +downstreamnt
atgatgcgcaaaaggatggctcctcttcagagacataaaaccggagtacaaaatgttttt
tatgtctgtctctccatttcggtggcttattcttacaatatagacttagaacatcctttg
gtgttccgcggaccaaattctagcttttttggctattctgtgctggagcattatcacgac
aacacacgctgggtaatcgtaggggctccgagggcaaactctacctacagtagctctgtg
cactctcctggagctgtatataagtgtcgagttcacagcaacccagagcgccgctgtaca
gagatggacctgggaagaggaaacaagccgagagagtcgtgtgggaagacgtgccaaggg
gacagggctgatgagtggatgggggtcagcctggcccgccaggaccgagccaatggcaaa
atactggcttgtgctcaccgctggaaaaacgtctactacgactcagaacatatcctccca
catggatactgctctatcattcctccaactcttcagggcaggacgaaaccgctcatcccc
tgttatgaagactataagcagaagtatggggaagagcacggctcgtgccaagccgggata
gcaggagtttttacagaggagttggtggtcatgggggcaccggggtcatactactggact
gggacgatcaaggtgtataatctgacctctgactctttctacagccccaacaaagaagac
gtggactcccatagatacagctaccttggctatgctgtgactgcaggacacttctcctct
cctaatgtaatagacatagctgcaggggcacctcagcacagcggcagtggaaaagtttac
attttcaaaatcgatggtgtgtctttggtgaagagttttcaagcctcagggaaaatgatg
ggctcttactttggctcctcattgtgtgcagttgatctgaaccaggacggcctgtcagac
ctgctggtgggggcacccatgcacagccagctccgggatgagggccaggtgtctgtgtac
ctcagcaagggcaatggggtgatggaggaggccggtgttttgactggagacagtgctttc
aatgcacactttggagaatgcattactgcaattggagacctagatgacgatggttatcaa
gatgtagccataggagcacctaaagaggatgactacggaggagctgtttatatctaccat
ggagatgctacaggaattatcaacaaatactctatgaaactgtctgggcgcagtataaat
cctggtctgcagatgtttggccagtcgatctctggcaacgtggacatggatggcaatggt
tacgcagatgtcactattggagctttcatggcagatagcgtggtgctgctgaggtcccgg
cctgtcattacggtggatgtctccatcttcctgcctgtctccatcaacatcactgtgcca
cagtgccacgagggcaaccagaaccaaaactgcttcaacgtcacagtctgcatgcgcttc
cggggtagacagctgcctggacagatagagttgctgtataacttgacagctgatgtggac
aagcgacagaagagccaaccttcccggatttacttcattcagagcggatctcagatcagc
cagatgagccagcagttcagtctggaaatcaacagggaggagtgccagcgatacacggcc
tacgttaagaaggatgtgaaggacgtgttcacaaccatcgcgttcgaggcagcttacagc
ctggggaagcatgtgctgacgggacaccaggatagagacctaccggcgctcactccagtg
ctacgatggaggaaaggaaacaagatcgccgtgaggaatgagacttggtttgagaagaac
tgcctgtcagatgactgcgctgcagacctgaggcttcatgggaaacttctgctctccggg
ttgcataccaggccccatttggccctgggaggagtgaggaacgtctctttgaacctgacc
atctcaaacaccggcgacgacgcctacgacaccaacatctacttcaacttctccagagag
gttttctacatcaacttttggcagaaggaagagaagggtatttcctgtgaacttgttgat
ttggacttcctcaaatgcagcgtgggatttcccttcatgagagcacagactaagtatcat
tttgcagtgatttttgacacaagtcagctctctggggaaaatgacacattgcagttcttg
gttcaagcaaaaagtgccaatcctgagcacaaactctctgacaacagtttggatctgtcc
attcctctggttcatgagactgacacaactattactggtgtggtgacaccgacttccttc
gtgtatggaaactccattgatgcctcacgcttcgtccagctggaagacatggagtgcaac
tttcagcctctcaatctcactttccaggccataaacaaggggcccagcaggctgcctggc
tccaccgtggacatcaggatacccaaccggctggctggcagcggagctgacatgttccac
atcattgaaacacaggtggctgatggtcgaggaaactgcacccctcacaggaacccgaca
ccgtgcaccatcccccaggaaaaagagagcatcttccactccatatttgccttcttcacc
aaatcaggacgcaaagtcctggactgtgaccggccgggaagagcatgtatgacaatctcc
tgcagtctgggtccacagttaaaagaagaagctttgagcatagatataaaacttctgctc
aacactgaaattcttaagagggatagttcctcagtgatccagtttgtgacacggggcagt
gtgcaagtaaatgacagagcagtggaggtgcctaaaggcctgccagaggacatttctctg
gtgttcgaggctctccacagtcaggaaccaaggggttacgtagttggttggatcatcgcc
atcagtcttctggtggggatcctcatctttttgctgttagctgtgctactctggaagatg
ggtttcttccgtcggcgctacagagagatcattgaggctgaaaagaacaggaaggacagt
gatgaaagctgggactggatggaaaagaatcactga

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