Lates calcarifer (barramundi perch): 108894382
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Entry
108894382 CDS
T04895
Name
(RefSeq) integrin alpha-9 isoform X1
KO
K06585
integrin alpha 9
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04510
Focal adhesion
lcf04512
ECM-receptor interaction
lcf04514
Cell adhesion molecules
lcf04810
Regulation of actin cytoskeleton
lcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108894382
04514 Cell adhesion molecules
108894382
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108894382
09142 Cell motility
04820 Cytoskeleton in muscle cells
108894382
04810 Regulation of actin cytoskeleton
108894382
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108894382
Cell adhesion molecules [BR:
lcf04515
]
Integrins
Integrin alpha subunits
108894382
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_3
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
108894382
NCBI-ProteinID:
XP_018548533
UniProt:
A0AAJ7VDP0
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Position
LG16_LG22:complement(5133587..5179454)
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AA seq
1031 aa
AA seq
DB search
MMRKRMAPLQRHKTGVQNVFYVCLSISVAYSYNIDLEHPLVFRGPNSSFFGYSVLEHYHD
NTRWVIVGAPRANSTYSSSVHSPGAVYKCRVHSNPERRCTEMDLGRGNKPRESCGKTCQG
DRADEWMGVSLARQDRANGKILACAHRWKNVYYDSEHILPHGYCSIIPPTLQGRTKPLIP
CYEDYKQKYGEEHGSCQAGIAGVFTEELVVMGAPGSYYWTGTIKVYNLTSDSFYSPNKED
VDSHRYSYLGYAVTAGHFSSPNVIDIAAGAPQHSGSGKVYIFKIDGVSLVKSFQASGKMM
GSYFGSSLCAVDLNQDGLSDLLVGAPMHSQLRDEGQVSVYLSKGNGVMEEAGVLTGDSAF
NAHFGECITAIGDLDDDGYQDVAIGAPKEDDYGGAVYIYHGDATGIINKYSMKLSGRSIN
PGLQMFGQSISGNVDMDGNGYADVTIGAFMADSVVLLRSRPVITVDVSIFLPVSINITVP
QCHEGNQNQNCFNVTVCMRFRGRQLPGQIELLYNLTADVDKRQKSQPSRIYFIQSGSQIS
QMSQQFSLEINREECQRYTAYVKKDVKDVFTTIAFEAAYSLGKHVLTGHQDRDLPALTPV
LRWRKGNKIAVRNETWFEKNCLSDDCAADLRLHGKLLLSGLHTRPHLALGGVRNVSLNLT
ISNTGDDAYDTNIYFNFSREVFYINFWQKEEKGISCELVDLDFLKCSVGFPFMRAQTKYH
FAVIFDTSQLSGENDTLQFLVQAKSANPEHKLSDNSLDLSIPLVHETDTTITGVVTPTSF
VYGNSIDASRFVQLEDMECNFQPLNLTFQAINKGPSRLPGSTVDIRIPNRLAGSGADMFH
IIETQVADGRGNCTPHRNPTPCTIPQEKESIFHSIFAFFTKSGRKVLDCDRPGRACMTIS
CSLGPQLKEEALSIDIKLLLNTEILKRDSSSVIQFVTRGSVQVNDRAVEVPKGLPEDISL
VFEALHSQEPRGYVVGWIIAISLLVGILIFLLLAVLLWKMGFFRRRYREIIEAEKNRKDS
DESWDWMEKNH
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcaaaaggatggctcctcttcagagacataaaaccggagtacaaaatgttttt
tatgtctgtctctccatttcggtggcttattcttacaatatagacttagaacatcctttg
gtgttccgcggaccaaattctagcttttttggctattctgtgctggagcattatcacgac
aacacacgctgggtaatcgtaggggctccgagggcaaactctacctacagtagctctgtg
cactctcctggagctgtatataagtgtcgagttcacagcaacccagagcgccgctgtaca
gagatggacctgggaagaggaaacaagccgagagagtcgtgtgggaagacgtgccaaggg
gacagggctgatgagtggatgggggtcagcctggcccgccaggaccgagccaatggcaaa
atactggcttgtgctcaccgctggaaaaacgtctactacgactcagaacatatcctccca
catggatactgctctatcattcctccaactcttcagggcaggacgaaaccgctcatcccc
tgttatgaagactataagcagaagtatggggaagagcacggctcgtgccaagccgggata
gcaggagtttttacagaggagttggtggtcatgggggcaccggggtcatactactggact
gggacgatcaaggtgtataatctgacctctgactctttctacagccccaacaaagaagac
gtggactcccatagatacagctaccttggctatgctgtgactgcaggacacttctcctct
cctaatgtaatagacatagctgcaggggcacctcagcacagcggcagtggaaaagtttac
attttcaaaatcgatggtgtgtctttggtgaagagttttcaagcctcagggaaaatgatg
ggctcttactttggctcctcattgtgtgcagttgatctgaaccaggacggcctgtcagac
ctgctggtgggggcacccatgcacagccagctccgggatgagggccaggtgtctgtgtac
ctcagcaagggcaatggggtgatggaggaggccggtgttttgactggagacagtgctttc
aatgcacactttggagaatgcattactgcaattggagacctagatgacgatggttatcaa
gatgtagccataggagcacctaaagaggatgactacggaggagctgtttatatctaccat
ggagatgctacaggaattatcaacaaatactctatgaaactgtctgggcgcagtataaat
cctggtctgcagatgtttggccagtcgatctctggcaacgtggacatggatggcaatggt
tacgcagatgtcactattggagctttcatggcagatagcgtggtgctgctgaggtcccgg
cctgtcattacggtggatgtctccatcttcctgcctgtctccatcaacatcactgtgcca
cagtgccacgagggcaaccagaaccaaaactgcttcaacgtcacagtctgcatgcgcttc
cggggtagacagctgcctggacagatagagttgctgtataacttgacagctgatgtggac
aagcgacagaagagccaaccttcccggatttacttcattcagagcggatctcagatcagc
cagatgagccagcagttcagtctggaaatcaacagggaggagtgccagcgatacacggcc
tacgttaagaaggatgtgaaggacgtgttcacaaccatcgcgttcgaggcagcttacagc
ctggggaagcatgtgctgacgggacaccaggatagagacctaccggcgctcactccagtg
ctacgatggaggaaaggaaacaagatcgccgtgaggaatgagacttggtttgagaagaac
tgcctgtcagatgactgcgctgcagacctgaggcttcatgggaaacttctgctctccggg
ttgcataccaggccccatttggccctgggaggagtgaggaacgtctctttgaacctgacc
atctcaaacaccggcgacgacgcctacgacaccaacatctacttcaacttctccagagag
gttttctacatcaacttttggcagaaggaagagaagggtatttcctgtgaacttgttgat
ttggacttcctcaaatgcagcgtgggatttcccttcatgagagcacagactaagtatcat
tttgcagtgatttttgacacaagtcagctctctggggaaaatgacacattgcagttcttg
gttcaagcaaaaagtgccaatcctgagcacaaactctctgacaacagtttggatctgtcc
attcctctggttcatgagactgacacaactattactggtgtggtgacaccgacttccttc
gtgtatggaaactccattgatgcctcacgcttcgtccagctggaagacatggagtgcaac
tttcagcctctcaatctcactttccaggccataaacaaggggcccagcaggctgcctggc
tccaccgtggacatcaggatacccaaccggctggctggcagcggagctgacatgttccac
atcattgaaacacaggtggctgatggtcgaggaaactgcacccctcacaggaacccgaca
ccgtgcaccatcccccaggaaaaagagagcatcttccactccatatttgccttcttcacc
aaatcaggacgcaaagtcctggactgtgaccggccgggaagagcatgtatgacaatctcc
tgcagtctgggtccacagttaaaagaagaagctttgagcatagatataaaacttctgctc
aacactgaaattcttaagagggatagttcctcagtgatccagtttgtgacacggggcagt
gtgcaagtaaatgacagagcagtggaggtgcctaaaggcctgccagaggacatttctctg
gtgttcgaggctctccacagtcaggaaccaaggggttacgtagttggttggatcatcgcc
atcagtcttctggtggggatcctcatctttttgctgttagctgtgctactctggaagatg
ggtttcttccgtcggcgctacagagagatcattgaggctgaaaagaacaggaaggacagt
gatgaaagctgggactggatggaaaagaatcactga
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