Lates calcarifer (barramundi perch): 108894392
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Entry
108894392 CDS
T04895
Symbol
lhcgr
Name
(RefSeq) lutropin-choriogonadotropic hormone receptor
KO
K04248
lutropin-choriogonadotropic hormone receptor
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04020
Calcium signaling pathway
lcf04080
Neuroactive ligand-receptor interaction
lcf04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108894392 (lhcgr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108894392 (lhcgr)
04081 Hormone signaling
108894392 (lhcgr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108894392 (lhcgr)
G protein-coupled receptors [BR:
lcf04030
]
Rhodopsin family
Peptide
Lutropin-choriogonadotropic hormone
108894392 (lhcgr)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
LRR_8
LRR_5
7TM_GPCR_Srv
Motif
Other DBs
NCBI-GeneID:
108894392
NCBI-ProteinID:
XP_018548553
UniProt:
A0A4W6F3Z3
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Position
LG16_LG22:5073878..5080158
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AA seq
721 aa
AA seq
DB search
MWTSLPVLSFLSVLFFYGYERASGFVCPMICRCFSDTIRCNNVTEGSTLTMGHIDRLSLY
HLSLRTISSHSFEGLKGVQRIEIAQSVTLETIETLAFNDLLNLSEISIQNTRSLRHISRR
TFNNLPRLHYLSISNTGITVFPDITSINSLDSEFILDICDNLYLLEIPPNAFIGMTNEYI
TMNLYNNGIREIHDYAFNGTKIDKLVLKNNRNLRVIHRDAFKGATGPGVLDVSATALTKL
PPQGLESVLVLLAQSAYALKSLSPLQGLWSLREAHLTYNSHCCALLSWNTHRDLPINPAW
TNGSIHCDESDPSARVQHMIGGSADSTLSMDMPYFSDVDLFVKDEVFGDVNFHYPELDLC
QTRPSLVCTPEADAFNPCEDIAGFSFLRVAIWFINILAIAGNLTVLLVFFTSRNKLMVPR
FLMCHLAFADLCIGIYLLMIATVDLRTRGYYSQHAIEWQTGPGCSAAGFLSVFGGELSVY
TLSTITVERWHTITNALQVERRLALTQAASIMVVGWLICLGMGILPLVGVSSYSKVSMCL
PMDIDTPLAQAFIIIILLFNVGAFIIVCVCYVLIYLAVKNPEFPRRSVDTKIAKRMAVLI
FTDFLCMAPISFFAISAAFKVPLITVTNSKILLVLFFPINSCANPFLYAIFTKAFRKDAY
QLLSAMGCCRSKANVYRMNAYCPENAVNNKCNNKGSHNGVRLTAMPPQSHHLKEGGEMNL
T
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtggacatcgctgccagtgctctcgttcctatctgttttattcttctatggatacgag
cgcgcttcgggtttcgtctgcccaatgatctgccgctgtttctccgacacaatcagatgc
aacaatgtgacagagggatctactctgacgatgggtcacatcgatagactgtctctatat
cacttgtctttgcgcaccatttcaagccactcctttgagggtttgaaaggagtccagagg
attgagattgctcagagtgtgaccctagaaaccattgagacattagcgtttaatgacctt
ctcaacctctctgaaatctcaatccagaatacaaggagtctgaggcacatcagccggagg
acatttaacaacctccccagactacattacctgagcatctcaaatactgggataacagtt
tttcctgacattacatctatcaattctcttgattcagagtttatcctggatatctgtgac
aatctgtatctactggaaatacccccaaatgctttcattggaatgacaaatgaatacatt
acaatgaacctgtacaacaacggcatcagagaaatacacgactatgccttcaatgggaca
aagatagataagctggtgttaaagaataaccgaaacctgagagtgatccacagagacgct
ttcaaaggagccacaggccctggggtcttggacgtatctgcaacagctcttacaaagttg
ccaccacagggactggagtcagttcttgtgttgttagcccagtcagcatacgccttgaag
agtttgtctcctctgcagggactgtggagcctgcgagaggcccacctcacctataacagt
cactgctgtgcactcctgagctggaacactcacagggaccttccgattaatcctgcatgg
actaatggttctatacattgtgatgagagtgatccatcagcaagggttcagcatatgatt
ggaggttcagcagattcaactctatctatggacatgccatatttctcagatgttgacctg
tttgtcaaggatgaagtttttggagatgtaaatttccactatccagagctggacctctgt
cagacccgaccaagtttggtttgcacacctgaagcagatgctttcaatccctgtgaggac
atcgcaggtttcagttttctcagagtggccatttggtttatcaacattctagctatcgca
ggtaacctcactgtgctgctggtcttctttaccagccggaacaagctgatggtgcctcgc
ttcctcatgtgccatctagcttttgctgacctctgcattgggatctaccttctgatgata
gcgactgtagacctgcgcacacgtggttactacagtcaacatgctattgaatggcagaca
gggccgggctgtagtgccgcaggcttcctgtctgtgtttggtggggagctgtcagtctac
acactgtccaccatcaccgtggagcgctggcacaccatcaccaacgctttgcaggtggaa
cgccgtctggcacttacacaggcagcgagcataatggtggttggttggctcatctgtctg
gggatggggatcctgcccctggttggtgtgagcagttacagcaaagtcagcatgtgctta
cccatggacatagacactcctctggctcaggcctttatcataattatcctgctcttcaat
gtgggtgccttcattattgtgtgtgtttgttatgtgctgatctatttggctgtaaagaac
cctgaattccccagaagaagtgttgacaccaagattgcaaaacgcatggccgtgctcatc
ttcacagattttctctgcatggcacctatctccttctttgccatttctgctgccttcaaa
gttcccctcattacagttaccaactccaagatcctgctggtcctcttcttccccatcaat
tcttgtgccaatccgttcctttatgctatcttcaccaaggctttcaggaaggatgcatat
cagctcttgagtgccatgggctgctgcagaagcaaggccaatgtttatcgaatgaacgcc
tactgcccagaaaatgcagtcaataataaatgcaataataaaggatcccacaatggagtg
aggttgactgccatgccaccgcagagccatcacctgaaagaggggggagagatgaatctc
acctga
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