Lates calcarifer (barramundi perch): 108894398
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Entry
108894398 CDS
T04895
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2-like
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108894398
Ion channels [BR:
lcf04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
108894398
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
Motif
Other DBs
NCBI-GeneID:
108894398
NCBI-ProteinID:
XP_050924169
UniProt:
A0AAJ8B0J8
LinkDB
All DBs
Position
Unknown
AA seq
933 aa
AA seq
DB search
MRLILVKPTNATRRLDSTGEVFHNGDHEHCTSGGPSAPTKTPEGKRDRYSGTSVEASSSL
QETSLHCVSSSPHERSNGISSPRVSAQMSPLKTQNLTLSQLSDQDWLLLCGQVSGMEDDS
PSAERAGTSVGHPNHNDRCGCSCPEAHQHSEASTFQPQSKHGTVQDSLSRVTNKKSLSSS
AHTQSFSQSTQGSTSCQVLPQQTDQKDLLKPATNHLQDNFMPQCSDQEGRKELLQQHPCN
HFKLKDSSQATYPNLFNIPLNSVECAETNLKLHQWPQPAIGADLSWRELFGKEPLLVQQR
PKQDSLTGKSSGDPSIILKCRHLPYNPLTSTPRAKRSSTSDKSIQSFSISQYSSLENHDF
AEERARQRQSQKNSQHLSGSKLSLPKHTPPPSDNLETSDTVNGDAVRPLSSQGTLRSSLA
DLHSGQQPLQLLHSAILEDAFSKVIREDSSKANSDNLTREEGSVPQKKTKDISYRLGQRR
ALFGKRKQLSDYALVCGMFGIIVMVIETELSRGFYSKESVYSYVLKGLISLSTAILLVLI
VMYHAREIQLFMVDNGADDWRIAMTFERILFVVLELLVCAIHPIPGQYVFTWTARLAFSY
TASVADADVDIILSVPMFLRLYLIGRVMLLHSKLFTDASSRSIGALNKINFDTRFVMKTL
MTICPGTVLLVFSVSCWIIAAWTVRVCERYHDAQEVTSTFLGAMWLISITFLSIGYGDMV
PHTYCGKGVCLLTGIMGAGCTALVVAVVARKSELTRAEKHVHNFMMDTQLYKKIKNTAAN
VLRETWLIYKNTKLVKKIDRARVRHHQRKFLQAIHQLRRVKMEQRKLTDQANTVADLAKT
QNMMYDLVSELQHRSEELDRRTVALEEKLDSILLSVQSLPVVLSQAITKLQKDFLDDLAC
RVHFLSSSLSSECCPVPARQLCPGSTTPETTYS
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgatcctggttaaacccaccaacgcaacgcggcgacttgactcaacaggtgaa
gtcttccacaacggggaccatgagcattgcacctcaggaggtccatctgctcctacaaag
acccccgaagggaaacgtgatcgatactctggaacctcagtcgaggcatcttcatccctg
caggagacgagtctgcactgcgtttcatcctcgccccatgaaagatctaatggaatcagt
tctccaagagtttcagcccagatgtcaccattgaaaacccaaaacctaaccttatcgcag
ctgagcgatcaggactggctattgctttgtggccaggttagcggcatggaagatgattca
ccctcagcagaaagagcagggaccagtgtgggacatccaaaccacaatgacagatgtggt
tgttcctgtcctgaggcacaccagcattcagaggcttctacttttcagccacagtcaaaa
catggtacagtccaagactccctctccagagttacaaataagaagagcctttcatcttca
gctcacacccaatctttctctcaaagcacccaaggttcaacctcttgccaggttttacca
cagcaaacagaccaaaaagatcttttgaagcctgcaacaaaccatctacaggataatttc
atgcctcagtgcagtgaccaagaaggtcgaaaggagctcttgcagcagcacccttgcaat
cattttaaactaaaagacagcagtcaagcaacttatccaaatttgttcaacattcctcta
aactctgtcgagtgtgccgagacaaatctgaaacttcatcagtggcctcagcctgccatc
ggtgcagacctcagctggagagaactttttggtaaagaaccactgttagttcagcaacgt
ccaaagcaagactctctcaccggcaagtcatctggggatccctcgatcatcctcaaatgc
cgtcatctcccttacaaccctctaaccagtactccacgggcgaagaggtcatctaccagt
gacaaaagcatccagtccttttccatcagccagtatagttcacttgagaaccatgatttt
gctgaggagagagcaagacagcgacaaagtcagaaaaactctcagcacctgagtggatca
aaactctccctccccaaacatacacctccaccatctgacaacttagaaacaagtgacaca
gttaacggggatgcagtgcgaccgctaagcagccagggcactttaagatccagtcttgct
gatcttcactcaggccaacagcctcttcagcttcttcacagtgccatccttgaggacgcg
ttctccaaagtcatcagggaagactccagtaaggccaacagtgacaacttgaccagggag
gaaggcagcgtaccacagaagaagactaaggacatcagctaccggctgggtcagagaagg
gctctctttgggaagcgcaaacaattgagcgactatgccttggtctgtgggatgtttggc
attattgtcatggtgatcgagacagagctttcaaggggattttacagcaaggaatctgta
tattcatatgtactgaaaggtctgatcagcctttctactgctatccttcttgtactcatt
gtgatgtaccatgcaagggaaatccagctcttcatggtggacaacggggcagatgattgg
agaatagctatgacctttgagcggattctctttgttgtgttggagcttctggtctgtgcc
atccatccaatcccaggccagtacgtgttcacctggacagctcgactggccttcagctac
acagcatcggtagcggatgcggatgttgacatcatcctctctgtgcccatgttcctgcgg
ctctacctgattggacgggtcatgctgcttcacagcaaactgttcacagacgcttcctcc
cgcagcatcggggcactcaacaagatcaactttgacacccgttttgtgatgaagaccctg
atgaccatttgccccggcacagtcctgctggtcttcagtgtctcctgttggatcatcgca
gcgtggaccgtgcgtgtatgtgagaggtatcatgatgcacaggaggtaactagtaccttc
cttggagcaatgtggctgatctctatcaccttcctgtccatcggttatggagacatggtt
cctcacacctactgtggaaaaggtgtttgcctgttaacaggaattatgggagcgggctgc
acagcgttagttgttgctgttgttgcaaggaagtcagaactcaccagagctgagaagcat
gtccataatttcatgatggatactcaactctacaaaaagataaaaaacacagcagctaat
gttttgagggagacctggctcatctataaaaacactaagctggtcaagaagatcgaccgt
gccagagtgcgccaccatcagcgtaaattcctgcaagccattcaccaactgcgaagagtc
aaaatggagcaaaggaaactaactgaccaggccaatacagtcgctgaccttgccaagact
cagaacatgatgtacgatctggtgtcggagctgcagcatcgaagcgaggagctggacagg
aggactgtagctctggaggagaaactggactccatccttctcagtgtgcagtcgctgccg
gttgtgctttctcaagcaataacaaagctacaaaaggatttcctggatgatttggcttgc
cgtgtccacttcctctcatcctctctgagctctgagtgctgtccggtccctgccaggcag
ctctgtccgggatccaccacaccagagaccacttacagctga
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