Lates calcarifer (barramundi perch): 108894427
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Entry
108894427 CDS
T04895
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03015
mRNA surveillance pathway
lcf04261
Adrenergic signaling in cardiomyocytes
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108894427
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108894427
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108894427
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108894427
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108894427
03036 Chromosome and associated proteins [BR:
lcf03036
]
108894427
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108894427
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108894427
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108894427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
InlK_D2
Motif
Other DBs
NCBI-GeneID:
108894427
NCBI-ProteinID:
XP_018548605
UniProt:
A0AAJ7Q7D8
LinkDB
All DBs
Position
LG9:4055769..4066623
Genome browser
AA seq
445 aa
AA seq
DB search
MAGPGGDMQWCFSQVKGAIDDDVAEADIISTVEFNHTGELLATGDKGGRVVIFQQEIENK
SQPQFRSEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLW
KISERDRRPEGYNLKEEDGRYKDPNTITSLRVPVLIPMDLMVEASPRRVFANAHTYHINS
ISVNSDNETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPHQCNTF
VYSSSKGTIRLCDMRVSALCDKHSKLFEEPEDPSNRSFFSEIISSISDVKFSHNGRYMMT
RDYLSVKIWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGNDSVVMTGSY
NNFFRMFDRGHRRDVTLEASRENSKPMQVLKPRKVCAGGKRKKDEISVDSLDFNKKILHT
AWHPQDNIIAVATTNNLYIFQDKVN
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcaggacctggaggtgacatgcagtggtgcttctctcaggtgaaaggagccatcgat
gatgacgtagctgaagcggacatcatatccacagttgagtttaaccacacaggggagctg
ctggccacaggagacaagggtgggcgtgtagtcattttccagcaggaaatagagaataag
agtcagcctcagttccggagtgaatacaatgtttacagcactttccagagccatgagcca
gagtttgactacttgaagagtttggaaatagaagagaagatcaacaagattcgctggctc
cctcagaagaatgctgctcagttcctgttgtcaactaatgataagacaattaaattgtgg
aaaatcagtgaacgagacaggagaccagagggctataatctcaaagaggaggatggacgc
tacaaagaccccaacactatcacgtcactgcgggtaccagttttaatacccatggacctc
atggtggaagccagtccacggagggtgtttgctaatgcccacacctaccatatcaactct
atctcagtcaacagtgacaacgagacttacctgtctgcagatgacctccgcatcaacctc
tggcaccttgagatcactgaccgtagcttcaatattgttgacattaaaccagccaacatg
gaggagctaacagaggtgatcacagcagcagagttccatccgcatcagtgtaataccttt
gtctacagcagcagcaaaggaaccattcgtctgtgtgacatgagggtttcagcactatgt
gacaagcactccaaattgtttgaggagccagaagatcccagcaatcgctccttcttctct
gagatcatatcctcaatctcagatgttaagtttagccacaatggacgctacatgatgacc
agagactacttgtctgtgaagatttgggacctgaacatggagaacaggccagtggagacc
tatcaggttcatgaatacctgaggagcaagctgtgctcgctctacgagaatgactgcatc
tttgacaagtttgaatgctgctggaatggcaatgacagtgtggtgatgactggctcatat
aacaacttcttccggatgtttgaccgtggccataggcgggatgtaaccttggaggcgtcc
cgagaaaacagtaagcccatgcaggtcctaaagccccgcaaagtgtgcgcaggtggcaag
cgcaagaaggatgaaatcagcgtagacagtttggacttcaacaagaagatccttcatact
gcctggcatccccaggacaacatcattgcagtggcgacgaccaacaacctctacatattc
caggataaagtgaactaa
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