Lates calcarifer (barramundi perch): 108894433
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Entry
108894433 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: hamartin-like
KO
K07206
tuberous sclerosis 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04140
Autophagy - animal
lcf04150
mTOR signaling pathway
lcf04218
Cellular senescence
lcf04910
Insulin signaling pathway
lcf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
108894433
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108894433
09143 Cell growth and death
04218 Cellular senescence
108894433
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
108894433
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108894433
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GFIT
Motif
Pfam:
Hamartin
Trimer_CC
Motif
Other DBs
NCBI-GeneID:
108894433
NCBI-ProteinID:
XP_050928744
UniProt:
A0AAJ8BBB8
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Position
LG9:3882011..3905051
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AA seq
1280 aa
AA seq
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MAREQPNVGDLLPLLETSDLHQLEEIRGLINEQLSTERGSMLLNGLVDYFLETNSAQAMH
ILSSVREPHDKHLLDKMNECMTKQACRLPTLTLLGHVIRKQPSWIHKIARYPLLLSLLKC
LKTDTDVVVLITGVLVLITLLPMIPQAGKQHLWEYFDIFGRLASWNLKNPGRIQEVYLIH
LHASVYSLFHRLYGMYPCNFVSYLRSHYSMKENMETFEEVVKPMLEHVRIHPELVTGTKD
HELDPTRWKKYEIHDIVIECAKVSLDPKEASCEEGYATMPENFYPQVHMRPQDCTSSPYT
DLHSSYGSSSSTPFSTPRQPLPPPLSLPPFSGTQSSYRSPQTSRRQNSTCELNSSCGGKD
PLWSPSSLCGMATPPSSRGMSPNLELSHSASHLPSRFHCTSGGKGTPASSTPATSSPPPT
LSDDFPIISLPANTVQSSPPRKDRRQGESSKPALVRQEPVKDTEKSSEVTTNRDAGAAEN
VSMTLTELSVFMKKQELELQFRTEKEREEAAITEELLKITEDTQELPGLRGFDSPFYHTT
ETLTGCQAQDKTLSNTQPGPVRDTHHVVSTPDKAETTASTSGVGSERGGGGAGGDSRNSA
LGLEQSWPFQSGFTPIDHHLHRSPSAPDDEVGKLGMFSPSPCSKTPAPVPYESFFDLALP
RAASLFVGQKTSEAVHKVAMERLLQQEEGLEDGEEEGVVSASPLEVLDRLVQQGSDAHDK
VLKRLPLPSKSADWTHFGGSAPLDELHTLRSQLLLLHNQLLYERYKREQHAVRNRRLLRR
IINATALEEQNNAMKDQLNLQSVDILSLRESLQVEQQRYRQLWDDRETVVTRLHSQIRQL
QQGRDDYYTKNQELQSKLQECQKRMDELEAELQRANNKVCHTGHLLNQMTVKLSNSESTQ
QQMSFLNKQLLLLGEAHKLSMQELHHTGTDNTKEAQMLQVSYAKEVETLRQSLLVQGQKL
DAAQQRVAELETHLSKKEHLIAEQKKFLEDVKCQAKAELQASDSRYQAQRRITQLLQTEL
LQLYSRVEMEAPASTATSSPPGGRADPHTLADSSVMVPDGPSKAHTNEEAASRPSHDSAR
GNGSTLSPGQPKASNSSKSTANSINGSQDLAPPLLVEPSPSCPHVNPLAPLPPSDAPLTV
GSYPSAKSFLGMRARELFRNKSESQCDEEQPPPRLAGLAHGLKTELCVEPPCPGYIVPVS
PAPSPIPTPAPAPTPAAATPLTVPTKEPPSEPKHRASSQESPRRKAGAGPGGGRGQGGSA
RPRQQHLKIMDYNETHHEHS
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggccagggagcagcccaatgtgggggacctcctcccgctcctggagacctccgacctc
caccagctagaagagatcagaggccttatcaacgagcagctcagcactgagcgagggtcc
atgttgctgaatgggctggtggactacttcttggagacaaactctgcccaggccatgcat
atcctctcctcagtcagagagccacatgataagcaccttctggacaagatgaacgagtgt
atgaccaaacaggcctgccgactgcccaccctcaccctgcttggccatgtaatccgcaag
cagccgtcctggatccacaagattgctcgataccctctgctgctctcactgctcaaatgc
ctaaagacggatacagacgtagtggtgttgataactggagtgctcgtgctgatcactctg
ctacccatgatccctcaagctgggaaacaacacctgtgggagtatttcgacatctttggc
cgcctggcgtcctggaatctcaagaaccctggtaggattcaggaggtttatctaatccac
ctgcacgccagcgtctattcactcttccaccgcctctacggcatgtacccgtgcaacttt
gtgtcctatctacgatcccactacagcatgaaggagaacatggaaacgtttgaggaagta
gtaaagccgatgcttgaacacgttcgtatacatcctgaactggtgacgggaacaaaggac
catgagcttgatcccacaaggtggaaaaagtatgaaatccatgatatcgtcatcgaatgt
gccaaagtgtctctagaccccaaggaggcctcctgtgaggagggttacgccaccatgcct
gagaacttttacccccaagtccacatgcgaccacaagactgcacttccagcccctacaca
gacctccacagcagctacggaagctcttcttcgaccccgttctccactccacggcagccg
ctgcccccgcccctgtccttgccccccttctcagggacacagtcctcctaccgcagccca
cagacctccagacgccagaactccacctgtgaactcaactcttcctgcggggggaaggac
cctctgtggagcccctcctcattgtgtggcatggccacgcccccatcctccaggggcatg
tcgcccaatttagagctctcccacagtgcctcacaccttcccagccgcttccactgcaca
tcaggagggaaaggaacgcctgcctccagcactccagccacctcctccccacctcctaca
ctatcagatgacttccccataatctccttaccagccaacacagtccagtccagtccacca
agaaaggatcgccgacaaggagagagcagtaaacctgcgctggtgagacaggagccagtg
aaagacacagagaagagttcagaagtaaccacaaacagagatgcaggagctgctgagaat
gtctccatgactttgacagagctgtcggtcttcatgaagaaacaggagctggagcttcag
tttagaacagagaaggagagggaagaggctgccatcacagaggagctgctgaagatcact
gaagatacgcaggagctgccgggtctgaggggctttgattcccctttctaccacaccact
gagactctgactggctgtcaggcacaagacaagaccctctccaacacccagcctggcccc
gtccgggacacccaccatgttgtgtcaacaccagacaaagcggagacaactgcgagtact
agcggtgttggcagcgaaagaggagggggaggagcagggggagacagcaggaattcagcc
cttggcctcgagcagtcctggcccttccagtcaggtttcaccccgatcgatcaccacctg
caccggagcccctccgcccctgacgatgaggtgggcaagttgggaatgttctccccaagc
ccctgcagcaagaccccagccccggtaccctacgagtcgtttttcgacctggccctgccc
agggcggcctcactttttgtagggcagaagacgtcggaggcggtgcacaaggtggcgatg
gagaggttgttgcagcaagaggaagggttggaggacggggaggaggaaggggtagtgtct
gcttcaccactggaggtgctggatcgccttgttcagcaggggagcgacgcccacgataaa
gttttgaagagattacctttgccaagtaagtcagctgactggacgcactttggaggctca
gctccgctggacgagcttcacacgctgcgcagccagctgctcctgctgcacaaccagctg
ctgtacgagcgctacaagagggagcagcacgccgtccgcaaccgacgcctcctccgacgc
atcatcaacgccactgcgctggaggaacagaacaatgctatgaaggaccagctgaacctg
cagagtgtggacatcttgtctctgagggagagtctgcaggtggagcagcagcggtacagg
cagctgtgggatgaccgggagacagtggtgaccaggctgcacagtcagatcagacagctg
cagcagggtcgagacgactactacaccaagaaccaggagctccagagtaagttgcaggag
tgtcagaagaggatggatgagctggaggcagagcttcagagggccaataacaaagtctgc
cacactggtcacctcctcaaccagatgaccgtcaagctgagcaacagtgagagcacccag
cagcagatgagcttcctgaacaagcagctgctgctcctcggggaggcacataagctgtcc
atgcaggagttacaccacacaggcaccgataatacaaaggaggcccagatgctgcaggtg
tcttatgcgaaagaggtggagacgctgaggcagagtttgctggttcagggtcagaaactg
gacgcggcgcagcagagagtcgctgagctggagacgcacctctccaagaaggaacacctc
attgccgagcagaaaaagttccttgaggatgtaaaatgtcaagcaaaggcggagctgcag
gcctcagacagcaggtatcaggctcagaggagaatcactcagctgctgcagactgaactc
ctgcagctgtacagcagagtggagatggaggcaccagccagcactgccaccagctcacca
ccagggggcagagctgacccacacactcttgctgattccagtgtcatggtgccagatgga
ccaagtaaagctcacaccaacgaagaagcggccagtagaccatcgcacgactccgctcgg
ggcaatggcagcactttatcgccagggcaaccaaaggcgagcaactcttccaagtcaaca
gccaactccatcaacggcagccaggacctggccccgcccctgctggttgagccctccccc
tcctgtccccacgtcaacccgctcgcacccctgcccccctctgacgcgcccctcactgta
ggctcctaccccagtgccaagagcttcctgggcatgagggcgcgcgagttgttccgcaac
aagagcgagagccagtgcgacgaggagcaaccaccgccacgccttgctggcctcgcccac
ggcctgaagactgagctttgtgtggagccaccctgcccgggttatattgtccccgtcagc
cctgcaccttcacctattccgactccagcccctgcccccacccctgccgctgccactcct
ctcactgtgcccaccaaggagcccccatctgagcccaagcaccgggcctccagccaggaa
agcccccgcaggaaggcaggagcggggcccggtggagggcggggtcagggagggtcggcg
cgcccccggcagcagcatctaaagatcatggactataacgaaacacatcatgagcacagt
taa
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