Lates calcarifer (barramundi perch): 108894439
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Entry
108894439 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 5
KO
K15202
general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcf03021
]
108894439
Transcription machinery [BR:
lcf03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
108894439
TFIIIC, fungi type
108894439
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Gene cluster
GFIT
Motif
Pfam:
Tau95
Tau95_N
Sigma70_ner
PCP_red
Motif
Other DBs
NCBI-GeneID:
108894439
NCBI-ProteinID:
XP_018548621
UniProt:
A0AAJ7Q7H1
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Position
LG9:complement(3864199..3868850)
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AA seq
534 aa
AA seq
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MTQRKATMAHSKELKLDFTLKELTLSCAAEGVDVPGSSSTVELRDNRLVCVEYPGVISSV
PRMLETLXGEQAVSKTFAHPNRRLELRYRPQDPFCHSLCGNRFSSSNLLLRVRRRVRKKD
PKDAEIHMDVLGVIGTTYKFQGLADFQCLAVHSEGGKDMSLYDKIILRKSENQAFFEQPM
PYFLPPAIFSRLDSPVDYFYRPDVSQHQLHLNKKNFIGLNRARRPHNAIFVSFTDPTVPA
ECLEAAKLNWARVCLKEADKEAEEKLKKMFESRPIWSRNAVKANINIHPDKLKLLLPVFA
YYMVTGPWRSLWVKLGYDPRKTTESKKYQMLDFRIRCSTKDGYSLSDMPVKAKRSALNYT
LPITFNKAGPQAASVMELPAQDGPSASRDTFPITHQLKESSYIFREGMLPPHRQMFYQLC
DLDVESIKQVIEKNSGNEQVCNERDGWCIVGTTDKLRDMISAMIKKVIRAQKPGLPEMPR
RSRRKGQSSKSSMRDVEAEEEEEEDGENEEDDDDDFQPSEGSENEMETEILDYM
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgacacagagaaaagccactatggcgcattccaaagagctgaagctggattttactctg
aaagagctgactctttcctgtgcggctgaaggtgtggatgtacccgggagctcgtccacc
gtggagctgcgggacaacaggctggtgtgtgtggagtatccgggggtgattagcagtgtg
cccaggatgctggagactctcnggggtgaacaagctgtatccaaaacctttgctcaccct
aaccggcggcttgagcttcgttaccgacctcaggaccctttctgtcactctctgtgtgga
aaccgcttctcgtccagcaacctcctcctccgagtgcggcggcgagtgcgaaaaaaagac
cccaaggatgctgagatccacatggacgtgcttggagtcattggaacaacatataaattc
caaggactggcagactttcagtgcctcgctgtgcattcagagggtggaaaggacatgtct
ttatacgacaaaatcatcctccgtaaatcagagaatcaagcgttcttcgagcagcccatg
ccttactttcttcccccggccatcttctcacgtctcgacagtcctgtggattatttctac
cggcctgacgtctctcaacatcagttgcacctcaacaaaaagaacttcattggtttgaat
cgtgctcgtcggccccataacgccatttttgtcagcttcacggatcccactgtgccggct
gagtgcctcgaggcggccaagctcaactgggcacgagtctgcctgaaggaggcggacaaa
gaggctgaggaaaaattgaaaaagatgtttgagagccggcccatctggtcacggaacgca
gtcaaggccaacatcaacatccaccctgataaacttaagctgctgctgcctgtctttgcc
tactacatggtgacaggaccgtggagaagtctgtgggtgaagctgggctatgacccccga
aagaccacagagtccaagaaataccagatgctggacttcaggatccgctgcagcaccaag
gatggctattcgctctctgacatgccagtaaaagccaagaggagcgcccttaactatact
ctgcctatcacattcaacaaagcaggtccccaggcagccagtgtgatggaacttccagct
caggatggtccaagtgccagtcgagatacattcccaatcacacaccagctgaaggagtca
tcctacattttcagagagggcatgctgcctcctcacaggcagatgttttaccagctctgt
gatttggatgtggaaagtatcaagcaggtgatcgagaagaatagcggtaatgaacaggtg
tgtaacgagcgggatggctggtgcatcgtcggcaccacagacaagctgagggacatgatc
tcagccatgatcaagaaggtcatccgagcacagaaaccaggattgccagaaatgcccagg
agaagcagacgcaaaggccagagttcaaaatcctcaatgagagacgtggaggccgaggaa
gaggaggaagaggacggtgagaacgaggaagacgacgatgacgactttcagccttctgag
ggaagtgaaaatgagatggagacagaaattctggattacatgtaa
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