KEGG   Lates calcarifer (barramundi perch): 108894527
Entry
108894527         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: neurexin-1a
  KO
K07377  neurexin
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    108894527
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108894527
Membrane trafficking [BR:lcf04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Others
    108894527
SSDB
Motif
Pfam: Laminin_G_2 Laminin_G_1 Laminin_G_3 EGF Syndecan
Other DBs
NCBI-GeneID: 108894527
NCBI-ProteinID: XP_050932507
UniProt: A0AAJ8BGA3
LinkDB
Position
LG16_LG22:complement(5449069..5682941)
AA seq 1495 aa
MVLQKPHGAHIIWVGLLICCFVETGTCLEFTGAEGQWARFPVWNACCESEMSFNMKTKSS
HGLLVYFDDEGFCDFLELLILNGKLSLRFSIFCAEPATVISDTAVNDNQWHTVTIRRNFK
NTTLMVDNEIKWVEVKSKRRDMTVFSPLFVGGISPKLRSLALQMTSTAVKDQLPFTGWIT
DIKVNNTESVMINSEGVLKDLCGTSNMCLNGGVCSLINNEPTCDCSQTGFQGKDCSEEDN
YSEGPAHLMMGDQGQRGEAWHVRSLLSIQGKEEYVATFKGSEFFCYDLSLNPIQSSSDEI
TLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNDWH
DVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGS
PVSNNFMGCLKEVVYKNNDVRLELSRLARQGDPKMKIHGTVAFKCENVATLDPITFETPE
SLIILNKWNAKKTGSISFDFRTTEPNGLLLFSHGKPKQQPKDSKSPQTLKVDFFAIEMLD
GHLYLLLDMGSGTTKTKAVNKKVNDGEWYHVDFQRDGRSGTISINTLRTAYTAPGESEIL
DLDDNLYLGGLPENKMGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDVRRLAEIQKAAG
VKPSCSKEPPKQCLSNPCQNNGICREGWNRYVCDCSGTGYLGRSCEREATILSYDGSKFM
KVNLPVVMHTEAEDVSLRFRSQRAYGILIATTSKDSADSLRLELESGRVRLTVNLDCIRI
NCTSSKGPETIFAGQNLNDNEWHTVRVFRRGKSLKLTVDDLPPVEGQMAGDHTQLEFHNI
ETGIVTEKRFLSMVPSNFIGHLQSLSFNGMAYIDLCKNGDIDYCELNAMIGFKNIIADPV
TFKSRSSYVTLTTLQAYYSMHLFFQFKTTSSDGLILYNSGDGNDFIVVELVKGYLHYVSD
LGNGAHLIKGNSNKPLNDNHWHNVIISRDTNNLHTVKIDTKITTQTTTGAKNLDLKGNLY
IGGVAKEMYKELPKLVHAKEGFQGCLASVDLNGRLPDLMSDALDCVGQIERGCEGPSTTC
QEDSCANQGVCLQQWEGFNCDCSMTTFGGPLCNDAGTTYIFGRDGGLITYTWPPNDRPST
RADRLAIGFSTHLKDAVLVRVDSSSGLGDFLKLHIEKGNIAVVFNVGTDDINIEETSKFV
NDGKYHIVKFTRSGGNATLQVDDLPVIERYPTGNNDNERLAIARQRIPYRLGRVVDEWLL
DKGRQLTIFNSQTTIQIGGWERDQSRSFQGQLSGLYYNGLKVFNMAAEGDPNIKIQGSVR
LVGESPSSITPQSSTTANRSETSTSIMEITTTTASSRRVKQTTPREPQQTTDDLLVASAE
CPSDDEDIDPCEPSSANPTGAGPRGPGTTEVFRESSSTTGMVVGIVAAAALCILILLYAM
YKYRNRDEGSYHVDESRNYISNSAQSNGTVVKEKPVNTAKTSSKNKKNKDKEYYV
NT seq 4488 nt   +upstreamnt  +downstreamnt
atggttttacaaaagccacatggtgcccatatcatatgggttgggctgctcatttgttgc
tttgtagaaactggcacttgtctagaattcacaggtgctgagggacagtgggctagattt
ccagtgtggaatgcatgttgcgaaagtgaaatgagcttcaatatgaaaaccaagagttcc
catgggctgctagtttacttcgacgatgagggattttgtgactttttagaacttctcata
ctgaatggtaaactcagtcttcgtttctcgatcttctgcgccgagcctgcaaccgtcata
tctgacacagcagtcaacgacaaccaatggcacacagtcacaataaggagaaactttaag
aacacaaccctaatggtggacaatgagataaagtgggtcgaggtgaagtcaaaaagacgg
gatatgactgttttcagccctttgtttgttggtggaatatcaccgaaattacgatctttg
gcgttacaaatgacatcaactgcagtcaaggatcagctgcctttcactggatggataaca
gacataaaggtcaacaacacggagtctgtaatgatcaacagtgaaggggtcttaaaagac
ctttgtggtacatccaacatgtgcttaaatggaggagtctgtagtttaattaacaacgaa
ccaacatgtgactgctctcagacgggcttccaaggaaaggactgcagtgaagaagacaac
tattctgaaggtccggcacacctgatgatgggcgaccaagggcagagaggggaagcttgg
catgtaaggtccctactgagcattcaaggaaaagaagagtatgttgcaaccttcaaagga
tcggagttcttctgctacgacttgtccttgaacccgattcaaagcagcagtgatgaaatc
acattgtcattcaaaaccctacagaggaatggactgatgctgcacacgggcaaatcagct
gattacgtcaacctggcactgaaaaatggggctgtctcactcgtcattaatttggggtct
ggagcctttgaagctcttgtggagccagtcaatgggaaatttaatgacaatgattggcat
gatgtcaaagtaacaaggaatctacgtcagcactcaggcattggacacgctatggtaacg
atatccgtggatgggattctgaccaccacaggatatacacaggaagactacaccatgcta
ggctctgacgactttttctatgttggagggagtcctagcacagctgacctgcctggatca
ccggttagcaacaacttcatgggctgcctcaaggaggttgtgtacaaaaacaatgatgtc
agacttgagctatccaggctggccaggcagggtgatcccaagatgaagatccatggtact
gtggcctttaagtgtgagaacgtggccactctggaccctatcacatttgagacaccagag
tctctcatcatcctcaacaagtggaacgctaagaagacaggctccatatcttttgacttc
cgtaccacagagcccaacggccttctcctcttcagccatggcaagcccaagcagcagccc
aaggattccaagagtccccagactctcaaggtggacttctttgccattgagatgctggat
ggtcatctgtacctgctgctggacatgggctctggaaccacaaagactaaggcagtcaac
aagaaagtcaatgacggcgagtggtaccatgtggacttccagcgagatggcagatcaggt
accatctctatcaacaccctccgcactgcctacacagcccctggggaaagtgagatcctg
gacttggatgacaatctctacctcgggggtctgccagagaacaaaatggggctggtgttc
cccactgaggtgtggacagcactactcaactatggttacgtgggctgcatccgggatcta
ttcattgacggacagagtaaggatgtccggcgcctggccgagatccagaaggcagccggg
gtgaagccctcgtgctctaaggagcctccaaaacagtgtttgagcaacccctgccaaaac
aatgggatctgtagagagggctggaaccgctacgtgtgtgattgctccgggactggatac
ctgggacgctcctgtgaaagagaggcgaccatcctcagctacgacggcagtaagtttatg
aaggtcaacttgccagtggtgatgcacacagaagctgaggatgtttccctgcgcttccgc
tcccagcgagcctatggcatcctcatcgccaccacgtctaaggactcggctgacagcctg
cgtctagagctggagagtggccgcgtccgcctgactgtcaatttagattgtatcaggatt
aactgtacctccagcaaaggtccagagactatttttgcgggtcagaatctgaacgataat
gagtggcacacagtacgtgtgttcaggaggggcaagagtttgaaactgaccgtagatgat
ctcccacccgtagaaggtcaaatggcgggcgaccacacccaactggagttccataacatt
gagacgggcatagtgacagagaagcgcttcttgtccatggtgccatccaacttcattggc
cacctccagagcctctccttcaatggcatggcctacatagacctctgtaaaaatggtgac
attgattactgtgagctcaatgccatgattggcttcaagaacatcattgctgaccccgtc
accttcaagtcacgctccagctatgtgaccctcactactctgcaggcctactactccatg
caccttttctttcagttcaaaaccacctcctccgatggcctcatcctgtacaacagcggg
gatggaaatgacttcatcgtagtggagctggtcaaaggttacctgcactatgtgtctgac
ctggggaatggagcccacttgatcaaaggcaactccaataagccactgaatgacaaccac
tggcacaatgttataatctccagggacaccaacaacctccacactgtcaagattgatacc
aagatcaccacacagacgaccacaggagccaaaaacctggacctgaagggtaacctttac
attggtggggtggctaaggagatgtacaaagagctacccaagctggtgcatgccaaggag
ggttttcaaggttgtctggcatcagtggatctgaatgggcggctcccagacttgatgtca
gatgctctggactgtgtggggcagatagagagaggatgtgaaggtcccagcactacgtgc
caagaggactcatgtgccaaccagggtgtgtgccttcagcagtgggagggcttcaactgt
gactgcagcatgacgacatttggaggaccgctctgtaatgacgcgggaacaacgtacata
tttgggcgagatggtggactgatcacatacacgtggccgccaaatgaccgtcccagcacg
agggcagatcggctagccattggtttcagcacgcacctgaaggatgctgtcctggtgagg
gtggatagctcctctggtctcggagacttcttgaagctccacatcgaaaaaggaaacatt
gctgttgtatttaatgtcggaacagatgacattaatattgaggagacatcaaagtttgta
aatgacggaaagtaccatatagtgaagtttacgaggagtgggggtaatgccactctgcag
gtggatgacctgccagtcattgagcgctaccccacaggcaacaatgataacgaacgcctg
gcgattgctagacagcgaatcccataccgacttggtcgagtagttgacgaatggctactc
gacaaagggcggcagctcacaatcttcaacagccaaaccactatacagattgggggctgg
gagcgagaccagagtcgatcctttcagggccagctttcgggcctctactataatggcttg
aaggtgttcaacatggccgcagagggggatcccaacataaagatccaaggcagcgtgcgg
ctggtgggcgagtcgccctcctctatcacaccgcagtcaagcaccacggccaatcgctcg
gagacgtccacctccatcatggagatcaccaccaccacggcgtccagcaggcgagtcaag
cagactacaccacgagagcctcagcagacaaccgatgacttgctggtggcatcagctgag
tgtccgagtgatgatgaggacattgatccctgtgagccgagctcagccaatcccactggt
gctggaccaaggggtccaggcacaacggaggtcttcagggagtccagcagcacaacgggg
atggtggtcggcattgtagcagcagctgccctatgtattctgatcctgctttacgctatg
tacaaataccggaacagagacgaaggctcataccatgtagatgagagtcgcaactacatc
agcaactcggcacagtccaacggcaccgtagtcaaagagaaaccagtcaacactgcaaag
acctcaagcaagaataagaagaacaaggacaaggagtactatgtgtga

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