Lates calcarifer (barramundi perch): 108894527
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Entry
108894527 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: neurexin-1a
KO
K07377
neurexin
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108894527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108894527
Membrane trafficking [BR:
lcf04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
108894527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
108894527
NCBI-ProteinID:
XP_050932507
UniProt:
A0AAJ8BGA3
LinkDB
All DBs
Position
LG16_LG22:complement(5449069..5682941)
Genome browser
AA seq
1495 aa
AA seq
DB search
MVLQKPHGAHIIWVGLLICCFVETGTCLEFTGAEGQWARFPVWNACCESEMSFNMKTKSS
HGLLVYFDDEGFCDFLELLILNGKLSLRFSIFCAEPATVISDTAVNDNQWHTVTIRRNFK
NTTLMVDNEIKWVEVKSKRRDMTVFSPLFVGGISPKLRSLALQMTSTAVKDQLPFTGWIT
DIKVNNTESVMINSEGVLKDLCGTSNMCLNGGVCSLINNEPTCDCSQTGFQGKDCSEEDN
YSEGPAHLMMGDQGQRGEAWHVRSLLSIQGKEEYVATFKGSEFFCYDLSLNPIQSSSDEI
TLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNDWH
DVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGS
PVSNNFMGCLKEVVYKNNDVRLELSRLARQGDPKMKIHGTVAFKCENVATLDPITFETPE
SLIILNKWNAKKTGSISFDFRTTEPNGLLLFSHGKPKQQPKDSKSPQTLKVDFFAIEMLD
GHLYLLLDMGSGTTKTKAVNKKVNDGEWYHVDFQRDGRSGTISINTLRTAYTAPGESEIL
DLDDNLYLGGLPENKMGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDVRRLAEIQKAAG
VKPSCSKEPPKQCLSNPCQNNGICREGWNRYVCDCSGTGYLGRSCEREATILSYDGSKFM
KVNLPVVMHTEAEDVSLRFRSQRAYGILIATTSKDSADSLRLELESGRVRLTVNLDCIRI
NCTSSKGPETIFAGQNLNDNEWHTVRVFRRGKSLKLTVDDLPPVEGQMAGDHTQLEFHNI
ETGIVTEKRFLSMVPSNFIGHLQSLSFNGMAYIDLCKNGDIDYCELNAMIGFKNIIADPV
TFKSRSSYVTLTTLQAYYSMHLFFQFKTTSSDGLILYNSGDGNDFIVVELVKGYLHYVSD
LGNGAHLIKGNSNKPLNDNHWHNVIISRDTNNLHTVKIDTKITTQTTTGAKNLDLKGNLY
IGGVAKEMYKELPKLVHAKEGFQGCLASVDLNGRLPDLMSDALDCVGQIERGCEGPSTTC
QEDSCANQGVCLQQWEGFNCDCSMTTFGGPLCNDAGTTYIFGRDGGLITYTWPPNDRPST
RADRLAIGFSTHLKDAVLVRVDSSSGLGDFLKLHIEKGNIAVVFNVGTDDINIEETSKFV
NDGKYHIVKFTRSGGNATLQVDDLPVIERYPTGNNDNERLAIARQRIPYRLGRVVDEWLL
DKGRQLTIFNSQTTIQIGGWERDQSRSFQGQLSGLYYNGLKVFNMAAEGDPNIKIQGSVR
LVGESPSSITPQSSTTANRSETSTSIMEITTTTASSRRVKQTTPREPQQTTDDLLVASAE
CPSDDEDIDPCEPSSANPTGAGPRGPGTTEVFRESSSTTGMVVGIVAAAALCILILLYAM
YKYRNRDEGSYHVDESRNYISNSAQSNGTVVKEKPVNTAKTSSKNKKNKDKEYYV
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atggttttacaaaagccacatggtgcccatatcatatgggttgggctgctcatttgttgc
tttgtagaaactggcacttgtctagaattcacaggtgctgagggacagtgggctagattt
ccagtgtggaatgcatgttgcgaaagtgaaatgagcttcaatatgaaaaccaagagttcc
catgggctgctagtttacttcgacgatgagggattttgtgactttttagaacttctcata
ctgaatggtaaactcagtcttcgtttctcgatcttctgcgccgagcctgcaaccgtcata
tctgacacagcagtcaacgacaaccaatggcacacagtcacaataaggagaaactttaag
aacacaaccctaatggtggacaatgagataaagtgggtcgaggtgaagtcaaaaagacgg
gatatgactgttttcagccctttgtttgttggtggaatatcaccgaaattacgatctttg
gcgttacaaatgacatcaactgcagtcaaggatcagctgcctttcactggatggataaca
gacataaaggtcaacaacacggagtctgtaatgatcaacagtgaaggggtcttaaaagac
ctttgtggtacatccaacatgtgcttaaatggaggagtctgtagtttaattaacaacgaa
ccaacatgtgactgctctcagacgggcttccaaggaaaggactgcagtgaagaagacaac
tattctgaaggtccggcacacctgatgatgggcgaccaagggcagagaggggaagcttgg
catgtaaggtccctactgagcattcaaggaaaagaagagtatgttgcaaccttcaaagga
tcggagttcttctgctacgacttgtccttgaacccgattcaaagcagcagtgatgaaatc
acattgtcattcaaaaccctacagaggaatggactgatgctgcacacgggcaaatcagct
gattacgtcaacctggcactgaaaaatggggctgtctcactcgtcattaatttggggtct
ggagcctttgaagctcttgtggagccagtcaatgggaaatttaatgacaatgattggcat
gatgtcaaagtaacaaggaatctacgtcagcactcaggcattggacacgctatggtaacg
atatccgtggatgggattctgaccaccacaggatatacacaggaagactacaccatgcta
ggctctgacgactttttctatgttggagggagtcctagcacagctgacctgcctggatca
ccggttagcaacaacttcatgggctgcctcaaggaggttgtgtacaaaaacaatgatgtc
agacttgagctatccaggctggccaggcagggtgatcccaagatgaagatccatggtact
gtggcctttaagtgtgagaacgtggccactctggaccctatcacatttgagacaccagag
tctctcatcatcctcaacaagtggaacgctaagaagacaggctccatatcttttgacttc
cgtaccacagagcccaacggccttctcctcttcagccatggcaagcccaagcagcagccc
aaggattccaagagtccccagactctcaaggtggacttctttgccattgagatgctggat
ggtcatctgtacctgctgctggacatgggctctggaaccacaaagactaaggcagtcaac
aagaaagtcaatgacggcgagtggtaccatgtggacttccagcgagatggcagatcaggt
accatctctatcaacaccctccgcactgcctacacagcccctggggaaagtgagatcctg
gacttggatgacaatctctacctcgggggtctgccagagaacaaaatggggctggtgttc
cccactgaggtgtggacagcactactcaactatggttacgtgggctgcatccgggatcta
ttcattgacggacagagtaaggatgtccggcgcctggccgagatccagaaggcagccggg
gtgaagccctcgtgctctaaggagcctccaaaacagtgtttgagcaacccctgccaaaac
aatgggatctgtagagagggctggaaccgctacgtgtgtgattgctccgggactggatac
ctgggacgctcctgtgaaagagaggcgaccatcctcagctacgacggcagtaagtttatg
aaggtcaacttgccagtggtgatgcacacagaagctgaggatgtttccctgcgcttccgc
tcccagcgagcctatggcatcctcatcgccaccacgtctaaggactcggctgacagcctg
cgtctagagctggagagtggccgcgtccgcctgactgtcaatttagattgtatcaggatt
aactgtacctccagcaaaggtccagagactatttttgcgggtcagaatctgaacgataat
gagtggcacacagtacgtgtgttcaggaggggcaagagtttgaaactgaccgtagatgat
ctcccacccgtagaaggtcaaatggcgggcgaccacacccaactggagttccataacatt
gagacgggcatagtgacagagaagcgcttcttgtccatggtgccatccaacttcattggc
cacctccagagcctctccttcaatggcatggcctacatagacctctgtaaaaatggtgac
attgattactgtgagctcaatgccatgattggcttcaagaacatcattgctgaccccgtc
accttcaagtcacgctccagctatgtgaccctcactactctgcaggcctactactccatg
caccttttctttcagttcaaaaccacctcctccgatggcctcatcctgtacaacagcggg
gatggaaatgacttcatcgtagtggagctggtcaaaggttacctgcactatgtgtctgac
ctggggaatggagcccacttgatcaaaggcaactccaataagccactgaatgacaaccac
tggcacaatgttataatctccagggacaccaacaacctccacactgtcaagattgatacc
aagatcaccacacagacgaccacaggagccaaaaacctggacctgaagggtaacctttac
attggtggggtggctaaggagatgtacaaagagctacccaagctggtgcatgccaaggag
ggttttcaaggttgtctggcatcagtggatctgaatgggcggctcccagacttgatgtca
gatgctctggactgtgtggggcagatagagagaggatgtgaaggtcccagcactacgtgc
caagaggactcatgtgccaaccagggtgtgtgccttcagcagtgggagggcttcaactgt
gactgcagcatgacgacatttggaggaccgctctgtaatgacgcgggaacaacgtacata
tttgggcgagatggtggactgatcacatacacgtggccgccaaatgaccgtcccagcacg
agggcagatcggctagccattggtttcagcacgcacctgaaggatgctgtcctggtgagg
gtggatagctcctctggtctcggagacttcttgaagctccacatcgaaaaaggaaacatt
gctgttgtatttaatgtcggaacagatgacattaatattgaggagacatcaaagtttgta
aatgacggaaagtaccatatagtgaagtttacgaggagtgggggtaatgccactctgcag
gtggatgacctgccagtcattgagcgctaccccacaggcaacaatgataacgaacgcctg
gcgattgctagacagcgaatcccataccgacttggtcgagtagttgacgaatggctactc
gacaaagggcggcagctcacaatcttcaacagccaaaccactatacagattgggggctgg
gagcgagaccagagtcgatcctttcagggccagctttcgggcctctactataatggcttg
aaggtgttcaacatggccgcagagggggatcccaacataaagatccaaggcagcgtgcgg
ctggtgggcgagtcgccctcctctatcacaccgcagtcaagcaccacggccaatcgctcg
gagacgtccacctccatcatggagatcaccaccaccacggcgtccagcaggcgagtcaag
cagactacaccacgagagcctcagcagacaaccgatgacttgctggtggcatcagctgag
tgtccgagtgatgatgaggacattgatccctgtgagccgagctcagccaatcccactggt
gctggaccaaggggtccaggcacaacggaggtcttcagggagtccagcagcacaacgggg
atggtggtcggcattgtagcagcagctgccctatgtattctgatcctgctttacgctatg
tacaaataccggaacagagacgaaggctcataccatgtagatgagagtcgcaactacatc
agcaactcggcacagtccaacggcaccgtagtcaaagagaaaccagtcaacactgcaaag
acctcaagcaagaataagaagaacaaggacaaggagtactatgtgtga
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integrated database retrieval system