Lates calcarifer (barramundi perch): 108894549 Help Entry 108894549         CDS       T04895                                  Symbol thbs2a Name (RefSeq) thrombospondin-2 isoform X1   KO K04659   thrombospondin 2/3/4/5 Organism lcf  Lates calcarifer (barramundi perch) Pathway lcf04145   Phagosome lcf04510   Focal adhesion lcf04512   ECM-receptor interaction lcf04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:lcf00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     108894549 (thbs2a)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     108894549 (thbs2a)   09144 Cellular community - eukaryotes    04510 Focal adhesion     108894549 (thbs2a)   09142 Cell motility    04820 Cytoskeleton in muscle cells     108894549 (thbs2a)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:lcf04131]     108894549 (thbs2a)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:lcf04147]     108894549 (thbs2a)    00536 Glycosaminoglycan binding proteins [BR:lcf00536]     108894549 (thbs2a) Membrane trafficking [BR:lcf04131]  Endocytosis   Phagocytosis    Opsonins     108894549 (thbs2a) Exosome [BR:lcf04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    108894549 (thbs2a)   Exosomal proteins of colorectal cancer cells    108894549 (thbs2a)   Exosomal proteins of bladder cancer cells    108894549 (thbs2a) Glycosaminoglycan binding proteins [BR:lcf00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    108894549 (thbs2a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC EGF_3 TSP1_CCN TSP1_CFP_C TSP1_ADAMTS cEGF EGF Laminin_G_3 Motif Other DBs NCBI-GeneID:  108894549 NCBI-ProteinID:  XP_018548758 UniProt:  A0A4W6EDJ8 LinkDB All DBs Position LG16_LG22:5892482..5909363 Genome browser AA seq 1183 aa AA seqDB search MILRRSLFLLLLSFNFLHALPQDGEQEDETSFDLFEISQISRKTLGAKQFRGQNSDIPAY RFIRFDHLPPVSPPILKQILRQIQNNEGFVFVASIRQDRASRGTLIGLEGPDGRRQFEIV SNGRANTLDLVYWVDGSQNVVSFEDVDLSDSQWKNITLHVHGENANLFVGCILIDSFILD EPFYEHLRAEGSRMYVAKGSIRENHFRGLLQNVRFIFDTPVEDVLLSRDCEVTKQDDANL VSESTEIVDVSPSITTNIIGQKTDETGADMCERSCEELSTMFQELKGLRVVVSNLIDGLQ KVTEENTVMKEALGRMKNSKEKNMCWQDGRLFDDKEDWVVDSCTKCTCQESKIVCHQITC PPVACATPSFFDGECCPVCMHREDGWSPWSEWTECTVTCGTGTQQRGRSCDATSNPCPGP SIQTRKCSLGKCDSRVRQDGGWSLWSPWSSCSVTCGEGQITRIRHCNAPVPQLGGKDCEG SGRETQRCTAKPCPIDGGWGPWSPWATCSATCGGGVKTRMRECNSPQPQHGGKKCIGEAN DSDSCNKKDCPIDGCLSNPCFGGVDCNSSPDGSWECGPCPAGFRGNGTHCEDINECDMVS DVCYKVSGTQRCVNTDPGFHCLPCPKRYKGTQPFGMGVEAAKKNKQVCEPENPCKDKTHN CHKYAECIYISHFSDPMYKCECKTGYAGDGFICGEDSDLDGWPNQNLVCGANATYHCKKD NCPSLPNSGQEDFDRDGQGDACDKDDDNDGILDERDNCPLLFNPRQFDFDKDEVGDRCDN CPYEHNPAQIDTDHNGEGDACAVDIDGDEILNENDNCPYVYNTDQKDTDMDGVGDQCDNC PLLHNPDQTDVDNDLVGDQCDNNQDIDEDGHQNNLDNCPYVANANQADHDKDGKGDACDY DDDNDGIPDDKDNCRLTPNADQLDSDGDGRGDACKDDFDNDNIPDILDVCPENNAISATD FRKFQMVHLDPKGTTQIDPNWVVRHQGKELVQTANSDPGIAVGFDEFNAVDFSGTMYVNT DRDDDYAGFVFGYQSSGRFYVVMWKQITQTYWEDKPSKAFGISGVSLKVVNSTTGTGENL RNALWHTGNTPGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGFIRVVVYEGKQIMADSG PIYDKTFAGGRLGLFVFSQELVFFSDLKYECRDKPELPTVFTR NT seq 3552 nt NT seq  +upstreamnt  +downstreamnt atgatactcaggagaagtctcttcttgctgctcttatcgtttaatttcctccacgcatta cctcaagatggtgaacaggaggacgagacatcctttgacttgtttgaaatcagccaaatc tcacgcaaaactctgggggccaaacagttccggggccaaaactcagacatacccgcttac cgcttcatccgctttgaccacctacccccagtgagcccccccatactaaaacaaatacta cgtcagatccaaaacaatgagggctttgtgtttgtggccagcatacgccaggaccgcgcc tcacggggcaccctgattggtttggagggccctgatggccggcggcagttcgagattgtg tccaacggaagggccaacacactggacctggtgtactgggtggatggctcacagaatgtg gtttcgttcgaggatgtggacctgtctgactcgcagtggaagaatatcacccttcatgtt catggggaaaatgcaaacctgtttgtgggctgcatcctgatagacagcttcattctggat gagcccttctatgagcacctgcgggctgagggaagccgcatgtatgttgcaaagggatcc atccgggagaaccacttcaggggccttctgcagaatgtgcgtttcatctttgacacccca gtggaagacgtcctcctgagcagggactgtgaggtcactaagcaagatgatgctaatctt gtgagcgaaagcacagaaattgtggatgtgagtccctccatcaccacaaacattataggt cagaagacagatgagacgggcgctgatatgtgcgaacgctcttgcgaggaacttagcacc atgttccaggagctcaaaggccttcgtgttgttgtcagtaaccttattgatggcctgcaa aaagtgacagaggagaacacagtcatgaaggaggcccttgggaggatgaagaactctaaa gagaaaaacatgtgctggcaggatggccgcctgtttgacgataaggaagactgggttgta gacagctgcaccaaatgtacttgccaggagtccaagatcgtgtgccaccaaattacatgc cccccagtggcctgtgccaccccctcatttttcgacggagagtgctgccccgtgtgtatg catcgtgaggatggctggtccccttggtcagagtggacagagtgcacagtcacctgtggc acaggaactcaacagaggggccggtcatgtgatgcaaccagtaacccttgccccggacct tctatccagacccgcaagtgcagccttggcaaatgtgacagccgcgttcgccaggacggt gggtggagtctgtggtcgccatggtcgtcctgctcagtgacctgcggagaaggacagatc accaggatacgacactgcaatgctcctgtgccgcagctggggggcaaagactgcgaagga agtgggagagagactcagcgctgcactgccaagccgtgtcccattgatggtggttggggt ccttggtctccatgggcaacctgttcagcaacatgcggagggggggtcaaaacacggatg cgtgagtgcaacagccctcaaccccagcatggcggcaagaagtgtatcggggaggccaac gacagtgacagctgtaacaaaaaagactgtcctattgatggctgtctgtctaacccatgc tttgggggagtggactgcaacagctctccagatggatcctgggagtgtggcccatgccct gccggtttccgcggaaatggtacccactgtgaagacattaatgagtgtgatatggtgtct gatgtttgctacaaagtgagtggaacgcaacgctgcgtcaatactgatccaggtttccac tgcctgccctgtccaaagcgctacaagggcacccagcctttcggtatgggtgtggaggct gccaagaagaacaaacaggtgtgtgagccagagaacccatgcaaggacaagacccacaat tgtcacaaatatgctgaatgtatctacatcagccacttcagtgacccaatgtacaagtgt gagtgtaagaccggttacgctggagatggcttcatttgtggagaagactcagacttggat ggctggcctaatcagaaccttgtgtgtggagccaacgccacttaccactgcaagaaagat aactgccctagccttcccaactctggacaagaagactttgacagagacggtcaaggagat gcttgtgacaaagatgacgacaatgatggaattctagatgaaagggacaactgtcccctt cttttcaatcctcgtcagttcgactttgacaaggatgaagttggtgacagatgcgacaac tgtccctatgaacacaaccctgctcaaatagacactgaccacaacggagaaggagacgcc tgtgcagtggatattgatggagatgaaattttgaatgagaacgacaactgcccctatgtg tacaacactgaccagaaggacacagacatggatggagttggtgaccagtgtgacaactgt ccattactgcacaatcctgaccagactgatgtagacaatgacctggttggagatcagtgt gacaataaccaagacatcgatgaggatggccatcaaaacaacctggacaattgcccctat gtggccaatgccaatcaggctgaccatgacaaggatggcaaaggagacgcgtgtgactat gacgatgataatgatggtatacctgacgacaaggacaactgcagactaacacccaatgca gaccagctggattctgatggcgatggaagaggcgatgcctgcaaagatgattttgacaat gacaatatcccagacattcttgatgtgtgtcccgagaacaatgccatcagtgccacagac ttcagaaagttccagatggtccacctggatcctaagggaaccactcaaattgatcctaac tgggtggtcagacaccagggcaaagagttggtccagactgccaactctgacccaggcatt gcagtaggttttgatgagttcaatgctgtggacttcagtggaacgatgtatgtaaacaca gacagagatgatgactatgcaggctttgtgtttggctaccagtcgagtgggcgcttttat gtagtgatgtggaagcagatcacacagacttactgggaggacaagccctccaaggccttt ggcatctctggcgtttcactcaaagtcgtcaactcgaccactggcaccggagaaaacctc aggaatgctttgtggcacacgggcaacactcccggacaggtgcgtactctgtggcacgac cccaaaaacattggttggaaggattacacagcctacaggtggcatctcatccacagacca aagactggttttattagggttgtggtctatgaaggtaaacagatcatggctgactcagga ccaatttatgacaagacgtttgctggaggaaggttaggcttgtttgtcttctcgcaagag ctggtgttcttctcggacctcaagtatgagtgcagagataagccggagttgccaacagtg ttcacaagataa

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