Lates calcarifer (barramundi perch): 108894562
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Entry
108894562 CDS
T04895
Name
(RefSeq) upstream stimulatory factor 1 isoform X1
KO
K09106
upstream stimulatory factor
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108894562
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
108894562
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Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
108894562
NCBI-ProteinID:
XP_018548792
UniProt:
A0AAJ7Q7G1
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Position
LG21:24688620..24697261
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AA seq
379 aa
AA seq
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MKSQKSPEPDGSVAVNEEGSVATAEDPAAIATIQSAATFTDQPIKYLFKTEGAGGQVTYR
VIQVSDGQLEAQTDGAAAVSLVAGFPATSQTVTQAVFSQSEGLEGDGSTETQYTYYPATI
ADATTGTMVTTVQASDTLLGQTTPTGQLYVMMSPQEVLTGSNQRTIAPRTQPYIAKQEAP
RASRDEKRRAQHNEVERRRRDKINNWIVQLSKAIPDCNVDYTKTGQSKGGILSKACEYIK
ELRQSNMKLGEDISALDRLRIDNQLLRQETMAFSHEGCPLQHLHTASCRLTPLHNLKLHC
SIEGKSPPDHDGAPSTVPCRNHLRWDLLVMPVTLEAIRTVKMASNGYGTAVGTSDKLNLG
RGLSRVLMDCQLDPPAQGW
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaagagccagaaaagccccgaacctgatgggagtgttgccgtcaacgaggaagggtct
gtagccactgcagaagatccagcagctattgccaccattcaatctgcagccaccttcacc
gaccaacctatcaaatatctcttcaagacagaaggagcaggcgggcaggtgacctacaga
gtgatacaggtgtcagatggccagttggaggctcagacagatggagctgcagcagtcagc
ctggtagccggtttccctgcaaccagtcagactgtcacacaggctgtgttctcccagtcg
gaggggttggagggagatggcagcactgagacacagtacacatattaccctgccaccatt
gctgatgccacaactggcaccatggtgaccacagtgcaggcctctgacacactgctgggc
cagactacacccacagggcagctctatgtgatgatgtcaccccaggaagttttgacagga
tccaatcaaaggacaatcgcacctcgtactcagccatacatagcaaagcaagaggctccc
cgggcttctagagatgagaaacggcgagcccagcacaacgaagtggagcgccggcggagg
gataagatcaacaactggattgtgcagctgtcaaaggccatcccagactgtaatgttgac
tataccaagacgggacagagtaaaggaggaatattgtccaaagcctgtgagtacatcaag
gaactgagacagagcaacatgaagctgggggaagacatcagcgctcttgatcgtctccgg
atcgacaaccagctactcagacaggagacgatggccttcagtcatgagggatgccccctg
caacatctccacacagccagctgccgtttgacgcctctgcacaacctgaagctccattgt
tccattgaaggaaaaagccccccagatcatgatggcgccccctccactgtgccgtgtaga
aatcatctcaggtgggatctccttgtcatgccagtaacgttggaagccatcaggaccgtc
aagatggcgtctaatggttatgggactgcagttggcaccagtgacaagcttaatttgggc
cgaggattgtcccgtgtcttgatggactgccaattggatcctccggctcagggctggtga
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